GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:16:57

Sequence gi568815597r:205670345_205874956 : 204612 bp : 44.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    240    332   93  2  0  109   72    61 0.980   6.76
 1.02 Intr +   1784   1974  191  1  2   85   94    56 0.742   4.28
 1.03 Intr +   2429   2545  117  2  0   18   80    86 0.375   0.38
 1.04 Intr +   4837   4894   58  1  1   82   71    10 0.207  -2.41
 1.05 Term +   5470   5688  219  0  0   98   48    68 0.243   0.84
 1.06 PlyA +   6855   6860    6                              -1.75

 2.06 PlyA -   7434   7429    6                               1.05
 2.05 Term -   8450   8317  134  0  2  110   40   103 0.808   5.95
 2.04 Intr -  17134  17042   93  2  0   80   81    67 0.459   5.14
 2.03 Intr -  20014  19970   45  2  0  122   88    -2 0.317   1.58
 2.02 Intr -  23001  22969   33  1  0  122   92    13 0.162   3.29
 2.01 Init -  33617  33605   13  2  1   81   61     1 0.020  -2.86
 2.00 Prom -  38235  38196   40                              -2.36

 3.07 PlyA -  39599  39594    6                               1.05
 3.06 Term -  48135  47936  200  1  2   91   42   163 0.997   9.56
 3.05 Intr -  49332  49183  150  1  0   70   91   169 0.996  15.53
 3.04 Intr -  50309  50157  153  0  0   50   36   209 0.978  11.94
 3.03 Intr -  53637  53582   56  2  2   73   67    82 0.917   3.22
 3.02 Intr -  57489  57356  134  0  2  -14   82   142 0.798   2.84
 3.01 Init -  59233  59228    6  1  0   61  111     0 0.609   0.57
 3.00 Prom -  61767  61728   40                              -4.36

 4.00 Prom +  64906  64945   40                              -2.66
 4.01 Init +  78689  78782   94  1  1   65   80    63 0.782   3.74
 4.02 Intr +  79106  79206  101  0  2   87   81     9 0.630  -0.07
 4.03 Term +  79620  80051  432  2  0   40   54   182 0.561   5.30
 4.04 PlyA +  83712  83717    6                               1.05

 5.06 PlyA -  84179  84174    6                               1.05
 5.05 Term - 100109  99998  112  1  1   85   39    89 0.986   1.73
 5.04 Intr - 100510 100389  122  1  2   81  107    41 0.591   4.59
 5.03 Intr - 101309 101128  182  0  2  116   95   193 0.999  22.39
 5.02 Intr - 102223 102152   72  2  0   19  103   103 0.934   4.28
 5.01 Init - 104612 104489  124  2  1   86   78   198 0.970  19.18
 5.00 Prom - 107961 107922   40                              -1.46

 6.12 PlyA - 107968 107963    6                               1.05
 6.11 Term - 121374 121189  186  0  0   92   33   161 0.991   8.49
 6.10 Intr - 124674 124526  149  1  2  110   87   168 0.940  18.85
 6.09 Intr - 125134 125000  135  2  0   98   57   168 0.983  15.24
 6.08 Intr - 126659 126580   80  1  2   79   77    41 0.964   1.29
 6.07 Intr - 127707 127560  148  1  1   95   96   149 0.999  15.69
 6.06 Intr - 128471 128325  147  0  0  101   35   259 0.814  22.11
 6.05 Intr - 128757 128613  145  0  1  106   86   243 0.971  25.76
 6.04 Intr - 129486 129415   72  0  0  108  110    89 0.997  12.70
 6.03 Intr - 130716 130609  108  0  0   61   73   111 0.990   7.38
 6.02 Intr - 140021 139726  296  0  2  117   91   339 0.979  33.83
 6.01 Init - 143070 142776  295  0  1   64   51   244 0.931  13.65
 6.00 Prom - 154973 154934   40                              -2.16

 7.14 PlyA - 157701 157696    6                               1.05
 7.13 Term - 158399 158276  124  1  1   86   51   135 0.778   7.46
 7.12 Intr - 160035 159936  100  1  1   88  113   135 0.998  15.17
 7.11 Intr - 162464 162254  211  2  1   23   95   220 0.703  14.69
 7.10 Intr - 169979 169908   72  2  0   79   87   111 0.782   9.70
 7.09 Intr - 171545 171467   79  1  1  107   87    36 0.542   4.95
 7.08 Intr - 173442 173323  120  2  0   52  119    99 0.978   9.01
 7.07 Intr - 173873 173743  131  2  2   53   70   165 0.978  10.69
 7.06 Intr - 174553 174467   87  1  0   53   65   114 0.952   5.77
 7.05 Intr - 175213 174981  233  2  2  110    6   244 0.881  15.89
 7.04 Intr - 177627 177541   87  1  0   76   82    63 0.771   4.44
 7.03 Intr - 178054 177985   70  1  1   -9   57    37 0.149 -10.35
 7.02 Intr - 179502 179348  155  1  2  117   58   113 0.396  10.99
 7.01 Init - 179728 179560  169  1  1   83   61   227 0.954  17.20
 7.00 Prom - 182303 182264   40                              -3.66

 8.04 PlyA - 182468 182463    6                               1.05
 8.03 Term - 186466 186360  107  2  2   70   50    64 0.074  -0.63
 8.02 Intr - 199903 199784  120  2  0  101   67    11 0.535   0.77
 8.01 Init - 202267 202228   40  1  1   68  111    83 0.979   8.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_1|225_aa
GLEARDLEFALLSCLFFTVTGSLLLSSLSERWRKGFLIPKQERLWLGETKYTFFSVSIPP
PHPRASPTTPAPLSAPSSKRNAKNATASPGAGPNSFYTCKMRANLDNAEGSLHLCNQVIS
HAPPTPGSCFFTGRNGVGPLCNEGLMTYYQTRQPPGNQAVKYPLSLLNLNCSNQAAPRVG
RCPRSSGSWICSPSPTAILPTSASAPGKQEAQALRRVGTQEKAYG

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_1|678_bp
ggcctggaggccagggatttagagttcgccctgctgagctgccttttcttcaccgttact
ggaagccttctgcttagcagcttgtcagagaggtggaggaagggctttctcattcccaaa
caggagcggctgtggttaggggagaccaagtacactttcttctcggtttccattcccccc
cctcacccacgtgcctcccccaccacaccagcgcctctttcagcccctagcagcaagagg
aatgccaagaatgcaactgcctccccaggtgctggccccaacagtttctacacctgtaaa
atgagagctaatctggataatgccgaaggttctttacatctgtgcaaccaggtgatctca
catgcaccccctacccccggcagttgcttcttcacgggcaggaatggggtaggacccctc
tgcaatgagggccttatgacctactatcaaacaaggcagccccctggaaaccaagccgtc
aagtatcccctctccctgctaaatctcaactgctctaaccaggcagcccccagggttgga
cgctgcccacggtcctcagggtcttggatttgcagtccttcccccactgccatcctcccc
actagtgcttcagctcctggaaagcaggaagcacaggccctgagaagagtaggtacccaa
gagaaagcctatgggtaa

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_2|105_aa
MEMIGKKSPVLPDFSGLDGLCKMVLCLGARGATLKPEVTSCVVKGSFVSNSKALPSCDDS
QGLSWSQDSVVLKVLRKCSLSQQNEFEDKNTAVDECTAVDRQAPI

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_2|318_bp
atggaaatgatagggaagaaaagtcctgttttaccagacttctcaggcctggatggattg
tgcaaaatggtactatgccttggagcaagaggggcaacactcaaacctgaggtcaccagc
tgtgtagtgaagggctcatttgtcagcaactccaaggctctgccatcttgtgatgacagt
caaggcctgtcgtggagccaggactctgttgttctgaaagtgctcagaaaatgcagcttg
agtcagcagaatgagtttgaagataaaaatacagctgtggatgaatgtacagctgtggac
agacaggccccaatttag

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_3|232_aa
MQLIKFEKHCLDEDYGRDSGPPTKKIRSSPREAKNKRRSGKNSQEDSEDSEDKDVKTKKD
DSHSAEDSEDEKEDHKNVRQQRQAASKAASKQREMLMEDVGSEEEQEEEDEAPFQEKDSG
SDEDFLMEDDDDSDYGSSKKKNKKMVKKSKPERKEKKMPKPRLKATVTPSPVKGKGKVGR
PTASKASKEKTPSPKEEDEEPESPPEKKTSTSPPPEKSGDEGSEDEAPSGED

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_3|699_bp
atgcagttaattaagtttgaaaaacactgtttagatgaagattatggaagagattcgggc
cctcccactaagaaaattcgatcatctccccgagaagctaaaaataagaggcgatctgga
aagaattcacaggaagatagtgaggactcagaagacaaagatgtgaagaccaagaaggat
gattctcactcagcagaggatagtgaagatgaaaaagaagatcataaaaatgtgcgccaa
caacggcaggcggcatctaaagcagcttctaaacagagagagatgctcatggaagatgtg
ggcagtgaggaagaacaagaagaggaggatgaggcaccattccaggagaaagattccggc
agcgatgaagatttcctaatggaagatgatgacgatagtgactatggcagttcgaaaaag
aaaaacaaaaagatggttaagaagtccaaacctgaaagaaaagaaaagaaaatgcccaaa
cccagactaaaggctacagtgacgccaagtccagtgaaaggcaaagggaaagtgggtcgc
cccacagcttcaaaggcatcaaaggaaaagactccttctcccaaagaagaagatgaggaa
ccggaaagcccgccagaaaagaaaacatctacaagccccccacccgagaaatctggggat
gaagggtctgaagatgaagccccttctggggaggattaa

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_4|208_aa
MKSDGYPNLALLLLKSLGDKRVTKISRDAYAGTPPSATERAQGPHPRASRWGKGQYGCLR
PSSLKAATCSLSKQDRVEKPKTRTPPTPRARRPTPPELQPMGPLLPNPELLASQTPLLFG
SGLLEQTSPPLPRLFKMDESNQPKMRQSRRATKPTRVCALLPNTPAHWRLLPDAPRSLVR
LNHHVFQAPPCSLIGSTFTVGVLLVKML

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_4|627_bp
atgaagtctgatggttacccgaacctagcccttttattactaaagtcactcggggacaag
agggttacaaaaatatcccgagacgcgtacgcgggaacacccccgtccgctacagagagg
gctcagggcccccacccccgcgccagtcgctgggggaaggggcaatacgggtgcctccgc
ccctcctcgctgaaggccgcgacatgttcgctgtcgaaacaggaccgagtcgagaagcca
aagaccaggaccccccccaccccgcgcgctcggcgccccaccccccccgaacttcagccg
atgggaccgctgctgccgaaccccgagctgctggcttctcaaactccgctgctctttggt
tcagggctcctggaacagacgagccccccgctcccccgtctcttcaaaatggatgaatca
aaccagccgaaaatgcgccaaagccgccgtgcaaccaaacccactagggtttgtgcgctc
ctccccaacacgcctgctcattggagacttctgccagatgcgcccagatcattagtccgt
ttgaatcatcacgtcttccaggccccgccctgctctctgataggctccaccttcaccgtg
ggggtcctgttagtcaagatgctctga

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_5|203_aa
MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ
LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
IMSLSTQGDYINLQTKSSSWSCC

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_5|612_bp
atgggcagccgcgaccacctgttcaaagtgctggtggtgggggacgccgcagtgggcaag
acgtcgctggtgcagcgatattcccaggacagcttcagcaaacactacaagtccacggtg
ggagtggattttgctctgaaggttctccagtggtctgactacgagatagtgcggcttcag
ctgtgggatattgcagggcaggagcgcttcacctctatgacacgattgtattatcgggat
gcctctgcctgtgttattatgtttgacgttaccaatgccactaccttcagcaacagccag
aggtggaaacaggacctagacagcaagctcacactacccaatggagagccggtgccctgc
ctgctcttggccaacaagtgtgatctgtccccttgggcagtgagccgggaccagattgac
cggttcagtaaagagaacggtttcacaggttggacagaaacatcagtcaaggagaacaaa
aatattaatgaggctatgagagtcctcattgaaaagatgatgagaaattccacagaagat
atcatgtctttgtccacccaaggggactacatcaatctacaaaccaagtcctccagctgg
tcctgctgctag

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_6|586_aa
MGAGTRALQAHGAGSRFPSLLLLRFPGAPPPGHEAKEGGRAEVDPAPSPVPDWLLLLSIR
ESIFDGAGGVPPSLPQITFATGSQPVGPESAGKKRLGAHGPGREPLAGTSEFLGPDGAGV
EVVIESRANAKGVREEDALLENGSQSNESDDVSTDRGPAPPSPLKETSFSIGLQVLFPFL
LAGFGTVAAGMVLDIVQHWEVFQKVTEVFILVPALLGLKGNLEMTLASRLSTAANIGHMD
TPKELWRMITGNMALIQVQATVVGFLASIAAVVFGWIPDGHFSIPHAFLLCASSVATAFI
ASLVLGMIMIGVIIGSRKIGINPDNVATPIAASLGDLITLALLSGISWGLYLELNHWRYI
YPLVCAFFVALLPVWVVLARRSPATREVLYSGWEPVIIAMAISSVGGLILDKTVSDPNFA
GMAVFTPVINGVGGNLVAVQASRISTFLHMNGMPGENSEQAPRRCPSPCTTFFSPDVNSR
SARVLFLLVVPGHLVFLYTISCMQGGHTTLTLIFIIFYMTAALLQVLILLYIADWMVHWM
WGRGLDPDNFSIPYLTALGDLLGTGLLALSFHVLWLIGDRDTDVGD

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_6|1761_bp
atgggcgctgggacccgcgcgctccaggcgcatggagccggctcccggttcccgtcactc
ctcctactgcgtttccccggcgccccgcctcctgggcacgaagcgaaggaagggggccgg
gccgaggttgatcccgccccctccccagtccctgattggctgctgctgttgtccatccga
gaatctatttttgatggagcggggggggtgccacccagtctgccccagatcacgtttgcc
accggcagccaaccagttgggcccgagtccgcgggcaagaagcgattgggggcgcatggc
ccagggagagagcccttggctgggacctcagagttcctggggcctgatggggctggggta
gaggtggtgattgagtctcgggccaacgccaagggggttcgggaggaggacgccctgctg
gagaacgggagccagagcaacgaaagtgacgacgtcagcacagaccgtggccctgcgcca
ccttccccgctcaaggagacctccttttccatcgggctgcaagtactgtttccattcctc
ctggcaggctttgggaccgtggctgctggcatggtgttggacatcgtgcagcactgggaa
gtcttccagaaggtgacagaggtcttcatcctagtgcctgcgctgctggggctcaaaggg
aacctggaaatgaccctggcatcaaggctttccactgcagccaacattggacacatggac
acacccaaggagctctggcggatgatcactgggaacatggccctcatccaggtgcaggcc
acggtggtgggcttcctggcgtccatcgcagccgtcgtctttggctggatccctgatggc
cacttcagtattccgcacgccttcctgctctgtgctagcagcgtggccacagccttcatt
gcctccctggtactgggtatgatcatgattggagtcatcattggctctcgcaagattggg
atcaacccagacaacgtggccacacccattgctgccagcctgggcgacctcatcaccttg
gcgctgctctcaggcatcagctggggactctacctggaactgaatcactggcgatacatc
tacccactggtgtgtgctttctttgtggccctgctgcctgtctgggtggtgctggcccga
cgaagtccagccacaagggaggtgttgtactcgggctgggagcctgttatcattgccatg
gccatcagcagtgtgggaggcctcatcttggacaagactgtctcagaccccaactttgct
gggatggctgtcttcacgcctgtgattaatggtgttgggggcaatctggtggcagtgcag
gccagccgcatctccaccttcctgcacatgaatggaatgcccggagagaactctgagcaa
gctcctcgccgctgtcccagtccttgtaccaccttcttcagccctgatgtgaattctcgc
tcagcccgggtcctcttcctcctcgtggtcccaggacacctggtgttcctctacaccatc
agctgtatgcagggcgggcacaccaccctcacactcatcttcatcatcttctatatgaca
gctgcactgctccaggtgctgattctcctgtacatcgcagactggatggtgcactggatg
tggggccggggcctggacccggacaacttctccatcccatacttgactgctctgggggac
ctgcttggcactgggctcctagcactcagcttccatgttctctggctcataggggaccga
gacacggatgtcggggactag

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_7|545_aa
MAQRCVCVLALVAMLLLVFPTVSRSMGPRSGEHQRASRIPSQFSKEERVAMKEALKGQPV
TPRFRRKASATAAGAPTRTPARPQHPSQHIVPLSGDATLPPYLAPGTLGPRTVGALRMMK
LGFIKAIGDFRGAIQIPTVTFSSEKSNTTALAEFGKYIHKVFPTVVSTSFIQHEVVEEYS
HLFTIQGSDPSLQPYLLMAHFDVVPAPEEGWEVPPFSGLERDGIIYGRGTLDDKNSVMAL
LQALELLLIRKYIPRRSFFISLGHDEESSGTGAQRISALLQSRGVQLAFIVDEGGFILDD
FIPNFKKPIALIAVSEKGSMNLMLQVNMTSGHSSAPPKETSIGILAAAVSRFMERNPLTN
AIIRTTTALTIFKAGVKFNVIPPVAQATVNFRIHPGQTVQEKSIRNRTPFVSTLEVLELT
KNIVADNRVQFHVLSAFDPLPVSPSDDKALGYQLLRQTVQSVFPEVNITAPVTSIGNTDS
RFFTNLTTGIYRFYPIYIQPEDFKRIHGVNEKISVQAYETQVKFIFELIQNADTDQEPVS
HLHKL

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_7|1638_bp
atggctcagcggtgcgtttgcgtgctggccctggtggctatgctgctcctagttttccct
accgtctccagatcgatgggcccgaggagcggggagcatcaaagggcgtcgcgaatccct
tctcagttcagcaaagaggaacgcgtcgcgatgaaagaggcgctgaaaggtcaacccgtg
actccccgcttccgccgcaaagcatctgctactgcagctggagccccgacacgcacccca
gcccggccccaacacccttcccagcacatcgtgcccctgtctggggacgccacacttccc
ccatacctggctcctggaactctgggacccaggacagtgggtgccttgagaatgatgaag
cttggattcatcaaagcaattggtgatttcagaggtgccatccagattccaacagtgact
tttagctctgagaagtccaatactacagccctggctgagttcggaaaatacattcataaa
gtctttcctacagtggtcagcaccagctttatccagcatgaagtcgtggaagagtatagc
cacctgttcactatccaaggctcggaccccagcttgcagccctacctgctgatggctcac
tttgatgtggtgcctgcccctgaagaaggctgggaggtgcccccattctctgggttggag
cgtgatggcatcatctatggtcggggcacactggacgacaagaactctgtgatggcatta
ctgcaggccttggagctcctgctgatcaggaagtacatcccccgaagatctttcttcatt
tctctgggccatgatgaggagtcatcagggacaggggctcagaggatctcagccctgcta
cagtcaaggggcgtccagctagccttcattgtggacgaggggggcttcatcttggatgat
ttcattcctaacttcaagaagcccatcgccttgattgcagtctcagagaagggttccatg
aacctcatgctgcaagtaaacatgacttcaggccactcttcagctcctccaaaggagaca
agcattggcatccttgcagctgctgtcagccggtttatggagagaaatcccttaaccaat
gcaataatcaggaccaccacggcactcaccatattcaaagcaggggtcaagttcaatgtc
atccccccagtggcccaggccacagtcaacttccggattcaccctggacagacagtccaa
gagaaatcaataagaaatcgaaccccctttgtttctaccctggaggtcctagaactcacg
aagaacattgtggctgataacagagtccagttccatgtgttgagtgcctttgaccccctc
cccgtcagcccttctgatgacaaggccttgggctaccagctgctccgccagaccgtacag
tccgtcttcccggaagtcaatattactgccccagttacttctattggcaacacagacagc
cgattctttacaaacctcaccactggcatctacaggttctaccccatctacatacagcct
gaagacttcaaacgcatccatggagtcaacgagaaaatctcagtccaagcctatgagacc
caagtgaaattcatctttgagttgattcagaatgctgacacagaccaggagccagtttct
cacctgcacaaactgtga

>gi568815597r:205670345_205874956|GENSCAN_predicted_peptide_8|88_aa
MGAVREALRQYSPGGKCSPHGKNAPKMYSGEFGPVRVYVPFSLSDLKQIKIDLDGFYYFE
LCPFYADFAGGFHHKVMLDFGKCFFCIH

>gi568815597r:205670345_205874956|GENSCAN_predicted_CDS_8|267_bp
atgggggctgtccgcgaagccttgcggcagtacagcccaggtgggaaatgttccccacac
ggcaaaaatgcacctaagatgtattctggagaatttggcccagtcagagtgtatgtacct
ttttccctctcagacttgaagcaaattaaaatagacctagatggcttttattactttgag
ttatgtcccttctatgctgactttgctggtggctttcatcataaagtgatgctggatttt
ggcaaatgctttttctgcatccattga