GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:43:53

Sequence gi568815595r:167584311_167820157 : 235847 bp : 36.42% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    816    855   40                              -2.15
 1.01 Init +  10970  11854  885  1  0   86   42   213 0.145  10.96
 1.02 Term +  12261  12272   12  2  0   93   44     6 0.079  -6.07
 1.03 PlyA +  12561  12566    6                               1.05

 2.08 PlyA -  12675  12670    6                              -0.45
 2.07 Term -  12989  12859  131  0  2  125   54    65 0.029   4.16
 2.06 Intr -  20158  19991  168  2  0   43   74    82 0.011   1.30
 2.05 Intr -  25076  25026   51  0  0  115   47    39 0.047   0.46
 2.04 Intr -  36293  36119  175  2  1   39   67    84 0.247  -0.01
 2.03 Intr -  37333  37157  177  1  0   79  115   118 0.986  12.79
 2.02 Intr -  42982  42542  441  1  0   68   87   293 0.180  19.93
 2.01 Init -  69115  68951  165  1  0   65  107   118 0.702  11.08
 2.00 Prom -  72833  72794   40                              -5.95

 3.09 PlyA -  72959  72954    6                               1.05
 3.08 Term -  74016  73963   54  0  0  125   44    62 0.036   2.08
 3.07 Intr - 103383 103305   79  2  1  111   83    85 0.435   8.93
 3.06 Intr - 106526 106496   31  0  1   69   33    50 0.397  -6.13
 3.05 Intr - 110331 110213  119  2  2  111   64   151 0.965  14.19
 3.04 Intr - 111412 111286  127  2  1   48   82   121 0.995   6.32
 3.03 Intr - 112816 112699  118  1  1   73   92   112 0.875   9.22
 3.02 Intr - 120585 120532   54  0  0   63  100    60 0.049   2.96
 3.01 Init - 135841 135752   90  1  0   51  105    68 0.107   5.34
 3.00 Prom - 140210 140171   40                              -4.55

 4.05 PlyA - 143263 143258    6                               1.05
 4.04 Term - 150775 150636  140  2  2   62   46   138 0.646   4.14
 4.03 Intr - 151351 150847  505  1  1   99   94   305 0.613  23.82
 4.02 Intr - 181160 181032  129  2  0   44   76    84 0.028   2.77
 4.01 Init - 181807 181169  639  1  0   31  -11   296 0.047   9.38
 4.00 Prom - 181895 181856   40                             -10.55

 5.00 Prom + 182060 182099   40                              -8.65
 5.01 Init + 182563 182731  169  0  1   35   56   195 0.720  10.74
 5.02 Intr + 183556 183695  140  2  2    3   54    89 0.239  -3.74
 5.03 Intr + 183838 183905   68  0  2   55  116    96 0.295   5.88
 5.04 Term + 202861 202951   91  1  1   80   54    92 0.312   1.21
 5.05 PlyA + 203555 203560    6                               1.05

 6.00 Prom + 204101 204140   40                              -2.15
 6.01 Init + 204819 205068  250  2  1   60   95   279 0.886  21.47
 6.02 Intr + 206062 206292  231  2  0  121   45   195 0.993  15.32
 6.03 Intr + 208280 208474  195  0  0   80   95   108 0.992   9.16
 6.04 Intr + 210310 210514  205  2  1   95   80   208 0.983  18.04
 6.05 Intr + 221863 221946   84  1  0   77   10   143 0.306   3.42
 6.06 Intr + 222934 223031   98  1  2  119   99   102 0.679  13.13
 6.07 Intr + 229386 229501  116  1  2   75   92    25 0.021   0.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 126802 127033  232  1  1   43   38   237 0.877   9.16
S.002 Sngl - 181807 181133  675  1  0   31   42   291 0.915  14.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:167584311_167820157|GENSCAN_predicted_peptide_1|298_aa
MAILPKIIYRFNAIPIKLPMTFLTELEKTTLKFIWNQKRARIAKSVLSQKNKSGGITLPD
FKLYYKATVTKTTWYWYQNRDIDQWNRTKPSEITLHIYNYLIFDKPEKNKQWGKDSLFNK
WCWGNWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIY
NELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTGHG

>gi568815595r:167584311_167820157|GENSCAN_predicted_CDS_1|897_bp
atggccatactgcccaagataatttacagattcaatgccatccccatcaagctaccaatg
actttcctcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcattgccaagtcagtcctaagccaaaagaacaaatctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacaacatggtactggtaccaaaacaga
gatatagatcaatggaacagaacaaagccctcagaaataacattgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctggggaaattggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacgtcagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaagattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaggacatggatga

>gi568815595r:167584311_167820157|GENSCAN_predicted_peptide_2|435_aa
MSCQKAVLELNIGSQLGPKSPERTEGVTAFEDYGTGLLENQLSVGDFVKIQKAFESPQPR
KIICMSREDFTQKMTEIVGWGTKEEYGELFDKVDVAQDGFINWDKLTSFILLELYEQDER
AKATVVPQWKDLEFLPVKHKDTIQKVIFLKNSSHYLTISKEGLLAIWGEHLKLQETFPIT
SDATKLKHLWVTSLVSLENVNKIAVAFTSKEVCFYDLLSKEEFACQYKLQGLKGTPICMD
YWYDPLDANESILSFGDITGKVQAIAFTAALISLFERPASACEDGEATMTINWAELLSGC
HKCCHILEHKLHQGDWVRQVPREALSTTQLLVGVEKVTYNASLDAIISSTTSNTNSVVMA
WREKSKKRLNMTSFNIAQGIHAFDYHSRLNLIGSTPCGSCQCLELAPFEVTALAVPWPLL
AKAGAGAAGMQGTIP

>gi568815595r:167584311_167820157|GENSCAN_predicted_CDS_2|1308_bp
atgagttgccagaaagctgtacttgagttaaacatagggtcacagcttgggccaaagagt
cctgagagaacagaaggtgtaactgcatttgaagactatggcacaggcctgcttgaaaac
caactcagcgtgggtgactttgtaaaaatacagaaggcctttgagtccccacagccaagg
aaaatcatttgtatgtccagagaagacttcacgcagaagatgacagagattgttggttgg
ggcacgaaggaagaatatggggagctctttgacaaagtggatgtggcccaagatggcttc
attaattgggacaagctgacttcatttatactgctagagctttatgagcaagatgaacga
gcaaaggcaactgtggtgccccagtggaaggaccttgaattcctcccagtaaaacacaag
gacaccattcaaaaagtaattttcttaaaaaattcaagtcattatctgacaattagtaaa
gaaggtttattggcaatctggggagagcatttaaagctgcaagaaacattccccatcact
tcagatgccaccaagctcaaacacctgtgggtgacaagtctggtttctctggaaaatgta
aacaagatagcagtggcttttacaagtaaagaggtttgtttctatgatctgctgtccaaa
gaagaatttgcttgccaatacaaactccaaggcctgaaaggaacaccaatttgcatggat
tattggtatgatcctcttgatgccaatgaatcaattctttcttttggggatataactgga
aaggttcaagcaattgctttcaccgcagccttgatttccctgtttgaacggcctgctagt
gcatgtgaagatggagaagccactatgaccattaactgggcagagctgctctctggatgt
cacaaatgttgccatatattagagcataaacttcatcaaggagattgggtcaggcaagtt
cccagagaagctctcagcaccacgcagttgctggtaggggtggagaaggttacttacaat
gcatctttagacgctatcatttccagtacaaccagcaatacaaatagtgtggtgatggct
tggagagagaaatcaaaaaagcgtcttaatatgacatccttcaacattgcccagggcatt
catgcttttgattatcactctcggctcaatttaattggctcaacaccatgtggaagctgc
caatgcttggagcttgcaccctttgaagtaacagccctagctgtaccttggcccctttta
gctaaggctggagctggagcagctgggatgcagggtaccattccctga

>gi568815595r:167584311_167820157|GENSCAN_predicted_peptide_3|223_aa
MTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDI
IMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEIN
DRVRFLQTIKMPKRTVSSADGTVREDPKRRLMWLSAKPALSVVEIEAPKVCASENEGNDL
DIASAIKELLDTVNNVFKKYQYQNRRNSASPSDSMPPIPRTLA

>gi568815595r:167584311_167820157|GENSCAN_predicted_CDS_3|672_bp
atgacaatggaagagatgaagaatgaagctgagaccacatccatggtttctatgcccctc
tatgcagtcatgtatcctgtgtttaatgagctagaacgagtaaatctgtctgcagcccag
acactgagagccgctttcatcaaggctgaaaaagaaaatccaggtctcacacaagacatc
attatgaaaattttagagaaaaaaagcgtggaagttaacttcacggagtcccttcttcgt
atggcagctgatgatgtagaagagtatatgattgaacgaccagagccagaattccaagac
ctaaacgaaaaggcacgagcacttaaacaaattctcagtaagatcccagatgagatcaat
gacagagtgaggtttctgcagacaatcaagatgcccaagaggacggtcagctcagctgat
gggacagtgagggaagatcccaaaaggagattgatgtggttgtcagctaaacctgctctt
tcagtagtggaaattgaagccccaaaagtttgtgcctctgaaaatgagggtaatgacttg
gatatagctagtgcaataaaagaacttcttgatacagtgaataatgtcttcaagaaatat
caataccagaaccgcaggaattctgcttctccttctgattcaatgccgcctattcccagg
acccttgcttga

>gi568815595r:167584311_167820157|GENSCAN_predicted_peptide_4|470_aa
MWKRLWNWVTGRGWKSLEGSEEDREVWEILELPRDLLNCFDKNADSDMNNKVQAGVVSDG
DELIGNCSKGDSCYVLAKRLAAFCPCPRDLWNFELDRDDLGYLAEEISKQQSIQKLTWVL
LKALSFIREVEHKSSENLQPDNAIEKKILFFEEKFKPAEEICISNKELNVIPKTIGKMSP
GHVRDFCGSSSHYRPRGLGGKSGFMGWAQEPRAPGDLVHCVLATPAVAERGQCRAWAVAS
EGASFKPWQLPYGVEPLANLAAVAPPPAVSAAARTGGSGKQLPWYLSAPCTSAAALPLPL
PWGSLSPPLWLTPGAASCPTQASLLGAPAQPILPRPVCPDARCAWGLAALREAAPLPSAS
PHTKPSLHLGDFPEASSPPTRHTQPDSPRIPTTGPSPPSFLCSVSPPPQWVRRLRGLLRT
LIGAGREFSYYWLEVSPPIASGSPAWPAGKCSLPIAGIADNAGERDYESP

>gi568815595r:167584311_167820157|GENSCAN_predicted_CDS_4|1413_bp
atgtggaagcgactttggaactgggtaacaggcagaggttggaaaagtttggagggctca
gaagaagacagggaagtgtgggaaattttggagcttcctagagacttgttgaattgcttt
gacaaaaatgctgatagtgatatgaacaataaggtccaggctggggtggtctcagatgga
gatgagcttattgggaactgcagcaaaggtgactcttgttatgttttagcaaagagactg
gcagcattttgcccctgccctagagatctgtggaactttgaacttgacagagatgattta
gggtatctggcagaggaaatttctaagcagcaaagcattcaaaaattgacttgggtgctg
ttaaaggcattgagttttataagagaagtagagcataaaagttcagaaaatttgcagcct
gacaatgctatagaaaagaaaattctattttttgaggagaaattcaagccagctgaagaa
atctgcataagtaacaaggagctgaatgttatccccaagacaatagggaaaatgtctcca
ggacatgtcagagacttctgtggcagctcctcccattacaggcccagaggcctaggagga
aaaagtggtttcatgggctgggcccaggaaccccgtgctcctggggacttggtgcactgc
gtcctagccactccagctgtggctgaaaggggacaatgtagagcttgggctgtggcttca
gagggtgcaagcttcaagccttggcagctaccatatggtgttgagcctttggcgaatttg
gcagctgttgctcctccccctgctgtttctgcagctgcccggaccggaggcagcggaaag
cagctgccctggtacctttccgctccctgcacttctgcagctgctctgccacttccactc
ccgtgggggtccctctcccctcctctgtggctcacacctggagcggcctcctgccccacc
caggcgtctctgctgggagccccggctcagcctatccttccccgacctgtgtgtccggat
gcccggtgtgcctggggcttagctgctctcagggaagctgcccctctgcccagtgcaagt
ccccacaccaagccctcccttcacctgggcgatttccccgaggcttcctctccacccaca
cggcatactcagcccgacagccccaggatccccaccacaggcccctcacccccttccttc
ctctgctctgtcagcccgccccctcaatgggtgaggcgcctgcggggcctactccgcacc
ctgattggcgcaggcagggaattctcctactattggctagaagtgtcaccacccatcgcc
tcaggatcccccgcatggcctgccgggaagtgtagtcttccgattgcaggaattgcggac
aacgccggcgagcgggactacgagtccccataa

>gi568815595r:167584311_167820157|GENSCAN_predicted_peptide_5|155_aa
MRFKKGSHLRNIKAYGEAASADGEAAASYPEDLAKMTDEGGYTKQHIFTVDETPLYWMRH
CFLWMSKGSVFLEVESTGEDAVNIVEITRKNLDYYKNSVDKAMILLQPPKPSATASLISE
QPSTSRWSSGAITPMELSSPVITMPSSGIPPEGSA

>gi568815595r:167584311_167820157|GENSCAN_predicted_CDS_5|468_bp
atgaggtttaagaaaggaagccatctccgtaacataaaagcgtatggagaagcagcaagt
gctgatggagaagctgcagcaagttatccagaagatctagctaagatgactgatgaaggt
ggctacactaaacaacatattttcactgtcgatgaaacacccttatactggatgaggcat
tgcttcttatggatgagcaaaggaagtgtttttttggaggtggaatctactggtgaagat
gctgtgaacattgttgaaattacaagaaagaatttagactattacaaaaactcagttgat
aaagcaatgatattgctacaaccacccaaaccttcagcaaccgccagccttatcagtgag
cagccatcaacatcaagatggtcttcaggggcaataacacccatggagctgtcatctcct
gtgataacaatgccttcttctggaatacctcctgaaggatctgcctga

>gi568815595r:167584311_167820157|GENSCAN_predicted_peptide_6|393_aa
MAFLGLFSLLVLQSMATGATFPEEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMM
ELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHV
NEEFLQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLAL
INAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQ
VLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLVEEWANSVKKQKVEVYLPRDMDEAG
NDHPQQTNTGAENQAPDVLTHKFTVEQEIDLKDVLKALGITEIFIKDANLTGLSDYLFTY
LSLSSELFKSIDIFLSPEHRREFVVGDRVDTEW

>gi568815595r:167584311_167820157|GENSCAN_predicted_CDS_6|1179_bp
atggctttccttggactcttctctttgctggttctgcaaagtatggctacaggggccact
ttccctgaggaagccattgctgacttgtcagtgaatatgtataatcgtcttagagccact
ggtgaagatgaaaatattctcttctctccattgagtattgctcttgcaatgggaatgatg
gaacttggggcccaaggatctacccagaaagaaatccgccactcaatgggatatgacagc
ctaaaaaatggtgaagaattttctttcttgaaggagttttcaaacatggtaactgctaaa
gagagccaatatgtgatgaaaattgccaattccttgtttgtgcaaaatggatttcatgtc
aatgaggagtttttgcaaatgatgaaaaaatattttaatgcagcagtaaatcatgtggac
ttcagtcaaaatgtagccgtggccaactacatcaataagtgggtggagaataacacaaac
aatctggtgaaagatttggtatccccaagggattttgatgctgccacttatctggccctc
attaatgctgtctatttcaaggggaactggaagtcgcagtttaggcctgaaaatactaga
accttttctttcactaaagatgatgaaagtgaagtccaaattccaatgatgtatcagcaa
ggagaattttattatggggaatttagtgatggctccaatgaagctggtggtatctaccaa
gtcctagaaataccatatgaaggagatgaaataagcatgatgctggtgctgtccagacag
gaagttcctcttgctactctggagccattagtcaaagcacagctggttgaagaatgggca
aactctgtgaagaagcaaaaagtagaagtatacctgcccagggacatggatgaagctgga
aacgatcatcctcagcaaactaacacaggagcagaaaaccaagcaccggatgttctcact
cataagttcacagtggaacaggaaattgatttaaaagatgttttgaaggctcttggaata
actgaaattttcatcaaagatgcaaatttgacaggcctctctgactatttgtttacatac
ttgtctctgagctcagagctattcaaaagcatagacatctttctgtccccagaacacaga
agagaatttgtggtgggggacagggtagataccgagtgg