GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:49:23

Sequence gi568815589f:38295749_38497299 : 201551 bp : 45.67% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1126   1121    6                               1.05
 1.03 Term -  10324  10308   17  2  2  153   53    -3 0.107   1.10
 1.02 Intr -  14242  14064  179  0  2   81   84    73 0.283   5.76
 1.01 Init -  22779  22751   29  0  2   94  110    54 0.616   7.28
 1.00 Prom -  23822  23783   40                              -2.76

 2.00 Prom +  38163  38202   40                              -3.16
 2.01 Init +  38302  38414  113  0  2   52   99    60 0.253   3.19
 2.02 Term +  50627  51014  388  2  1   78   46   156 0.139   4.81
 2.03 PlyA +  54818  54823    6                               1.05

 3.07 PlyA -  57551  57546    6                               1.05
 3.06 Term -  59184  59087   98  1  2   84   42   238 0.093  16.93
 3.05 Intr -  67725  67669   57  1  0   92   82    17 0.094   0.36
 3.04 Intr -  77221  77162   60  2  0   97   87    55 0.707   5.01
 3.03 Intr -  83086  83002   85  1  1   24  113    66 0.011   2.09
 3.02 Intr -  90058  89927  132  1  0   62   77    71 0.056   4.24
 3.01 Init -  97212  97069  144  0  0   55   18   114 0.066   1.22
 3.00 Prom -  99314  99275   40                               0.24

 4.00 Prom +  99724  99763   40                              -9.95
 4.01 Sngl + 100001 101554 1554  1  0   82   48  2328 0.937 221.58
 4.02 PlyA + 101686 101691    6                               1.05

 5.09 PlyA - 103254 103249    6                               1.05
 5.08 Term - 115801 115652  150  1  0  106   45   136 0.963   9.01
 5.07 Intr - 117605 117489  117  2  0  121   97    91 0.999  13.96
 5.06 Intr - 118455 118346  110  1  2   99   63   112 0.780   9.80
 5.05 Intr - 119330 119258   73  2  1   15   94    51 0.154  -2.62
 5.04 Intr - 123432 123351   82  2  1  105   75    10 0.917   1.04
 5.03 Intr - 124183 124070  114  0  0   64   61   179 0.970  12.36
 5.02 Intr - 126746 126674   73  0  1   75   92    15 0.973  -0.94
 5.01 Init - 128676 128217  460  0  1   83  109   728 0.995  68.32
 5.00 Prom - 129888 129849   40                              -5.16

 6.04 PlyA - 134072 134067    6                               1.05
 6.03 Term - 136727 136540  188  0  2   64   50   145 0.404   5.95
 6.02 Intr - 142607 142514   94  2  1  100   72     8 0.185  -0.06
 6.01 Init - 144011 143955   57  2  0   75  121    19 0.229   5.21
 6.00 Prom - 154110 154071   40                              -4.26

 7.00 Prom + 155301 155340   40                              -5.36
 7.01 Init + 158072 158082   11  1  2  117   43    18 0.030  -0.92
 7.02 Intr + 160370 160445   76  2  1   91   89    57 0.031   5.62
 7.03 Intr + 163460 163557   98  1  2   13   94    28 0.030  -5.29
 7.04 Intr + 166355 166485  131  2  2  132   79   160 0.944  19.84
 7.05 Intr + 174099 174217  119  1  2   76   99    96 0.903   9.68
 7.06 Intr + 178679 178792  114  1  0   78  115     7 0.297   3.04
 7.07 Intr + 182699 183021  323  1  2  -26    4   260 0.264   0.86
 7.08 Term + 183104 183602  499  2  1    4   50   288 0.440  10.60
 7.09 PlyA + 185680 185685    6                               1.05

 8.02 PlyA - 186072 186067    6                               1.05
 8.01 Term - 192548 192133  416  0  2    9   43   406 0.452  23.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  59034  59170  137  1  2    7   50   276 0.878  13.88
S.002 Init -  78602  78452  151  2  1   58   69    83 0.818   3.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_1|74_aa
MTKGTGFGDRASGKCHLKLPSLSNQKEGGLEQSSSQDCPGNWTLKTVGAYRSACKQESEA
HTDNSNQPQGLPIP

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_1|225_bp
atgaccaagggcacaggatttggcgacagggcatctgggaaatgtcatcttaagctgccc
agcctctccaaccagaaggagggtggactggagcaatccagttcacaggactgtccaggg
aactggactctgaagactgtgggggcctataggagtgcatgcaaacaggaaagcgaggct
cacacagacaacagcaatcagccacagggcctccctattccctga

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_2|166_aa
MPLLSSHVERPDYPTELRFHVYTMGGKNLYLREIVTLRTRAVILIKTFGALHGLRNQAHA
LQLTIKPSAIRLAWDFSGLIPHFPSISTHTLQGHSHGPTSYSPVPLVLSHLRALGHVVPS
LGNTLPPHLCPSNLLSFQDSPKAISSMKSSLTTFQKAGTSQSSELL

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_2|501_bp
atgccattgctgagcagccatgtagagagaccagattatcccactgagcttcggttccac
gtctacacaatgggagggaaaaacctatatctcagagagattgtgacactcaggaccagg
gccgttatccttatcaaaactttcggtgctctccatgggctgagaaaccaggctcatgct
cttcagctgacaatcaagccctctgccatccggctggcctgggacttctctggccttatt
ccccatttccccagcatctccacccatactcttcagggccactcacacgggcccacctcc
tattctccagtacccctggttctctcccacctccgagccttgggtcatgtggtcccttca
cttggaaacactcttcctcctcatctctgcccatctaatctactgtccttccaggacagc
ccaaaggccatctcctccatgaagtcctctctgactaccttccagaaggcagggacctct
cagtcctctgagctcctatga

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_3|191_aa
MGLGDVERVLQCNGGKASPQMRTPRPREESPHAEPGAAASRGSRGETSTGEADRHGDWHV
SLTQCEKENPESGAKRAEKQEMGQNNYTKPGKHMVDVAVVCPELVGSLLTDFKNEAVDPH
DRREDLLINVCTSASEEKQGYPPSDPASVLSPPHHEAAAVPKVISEQQQQQQQQQQQQQQ
QTSFEGPKKQA

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_3|576_bp
atgggattaggggacgtggagagagtcctacagtgcaacggcggaaaggccagcccccag
atgcggacgccgcggcccagagaggaaagcccccacgcggagccaggagctgcggcttcc
cgagggagccgaggggagaccagcactggggaggcagacagacatggagactggcatgtt
tccctcacacagtgtgagaaagagaacccagagagtggtgccaagagagcagagaaacag
gaaatgggacaaaacaactacacaaagcctgggaagcatatggtagatgtagcggtggtg
tgcccggaattggtgggttctttgctcactgacttcaagaatgaagccgtggaccctcac
gaccgccgtgaagatttactaataaatgtctgcacatcagccagtgaagagaagcagggc
tacccacccagtgatcctgcctctgtcctctcacccccgcatcatgaagcagctgccgtc
ccaaaggtcatctcagagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagacaagctttgaggggcccaaaaagcaggcctag

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_4|517_aa
MLRFLAPRLLSLQGRTARYSSAAALPSPILNPDIPYNQLFINNEWQDAVSKKTFPTVNPT
TGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLA
SLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCG
QIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITG
YGPTAGAAIAQHVDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADM
EHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGP
QVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGP
VQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHT
PFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKNS

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_4|1554_bp
atgctgcgcttcctggcaccccggctgcttagcctccagggcaggaccgcccgctactcc
tcggcagcagccctcccaagccccattctgaacccagacatcccctacaaccagctgttc
atcaacaatgaatggcaagatgcagtcagcaagaagaccttcccgacggtcaaccctacc
accggggaggtcattgggcacgtggctgaaggtgaccgggctgatgtggatcgggccgtg
aaagcagcccgggaagccttccgcctggggtccccatggcgccggatggatgcctctgag
cggggccggctgctgaaccgcctggcagacctagtggagcgggatcgagtctacttggcc
tcactcgagaccttggacaatgggaagcctttccaagagtcttacgccttggacttggat
gaggtcatcaaggtgtatcggtactttgctggctgggctgacaagtggcatggcaagacc
atccccatggatggccagcatttctgcttcacccggcatgagcccgttggtgtctgtggc
cagatcatcccgtggaacttccccttggtcatgcagggttggaaacttgccccggcactc
gccacaggcaacactgtggttatgaaggtggcagagcagacccccctctctgccctgtat
ttggcctccctcatcaaggaggcaggctttccccctggggtggtgaacatcatcacgggg
tatggcccaacagcaggtgcggccatcgcccagcacgtggatgttgacaaagttgccttc
accggttccaccgaggtgggccacctgatccagaaagcagctggcgattccaacctcaag
agagtcaccctggagctgggtggtaagagccccagcatcgtgctggccgatgctgacatg
gagcatgccgtggagcagtgccacgaagccctgttcttcaacatgggccagtgctgctgt
gctggctcccggaccttcgtggaagaatccatctacaatgagtttctcgagagaaccgtg
gagaaagcaaagcagaggaaagtggggaacccctttgagctggacacccagcaggggcct
caggtggacaaggagcagtttgaacgagtcctaggctacatccagcttggccagaaggag
ggcgcaaaactcctctgtggcggagagcgtttcggggagcgtggtttcttcatcaagcct
actgtctttggtggcgtgcaggatgacatgagaattgccaaagaggagatctttgggcct
gtgcagcccctgttcaagttcaagaagattgaggaggtggttgagagggccaacaacacc
aggtatggcctggctgcggctgtgttcacccgggatctggacaaggccatgtacttcacc
caggcactccaggccgggaccgtgtgggtaaacacctacaacatcgtcacctgccacacg
ccatttggagggtttaaggaatctggaaacgggagggagctgggtgaggatgggcttaag
gcctacacagaggtaaagacggtcaccatcaaggttcctcagaagaactcgtaa

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_5|392_aa
MPRLSLLLPLLLLLLLPLLPPLSPSLGIRDVGGRRPKCGPCRPEGCPAPAPCPAPGISAL
DECGCCARCLGAEGASCGGRAGGRCGPGLVCASQAAGAAPEGTGLCVCAQRGTVCGSDGR
SYPSVCALRLRARHTPRAHPGHLHKARDGPCEFVPITRFYNCFPQPLIHRQFSLSPDRRQ
SETLSKKKKKKEEEEEEEEEGEEEKEEEGCKSNFQHTINFKEISEGFGKIFSFQPSMIDI
IDEASTLHVAQHAVVLDARVAELLSNAAPVVVVPPRSVHNVTGAQVGLSCEVRAVPTPVI
TWRKVTKSPEGTQALEELPGDHVNIAVQVRGGPSDHEATAWILINPLRKEDEGVYQCHAA
NMVGEAESHSTVTVLDLSKYRSFHFPAPDDRM

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_5|1179_bp
atgccgcgcttgtctctgctcttgccgctgctgcttctgctgctgctgccgctgctgccg
ccgctgtccccgagccttgggatccgcgacgtgggcggccggcgccccaagtgtggtccg
tgccggccagagggctgcccggcgcctgcgccctgcccggcgcccgggatctcggcgctc
gacgagtgcggctgctgcgcccgctgcctgggagccgagggcgcgagctgcgggggccgc
gccggcgggcgctgtggccccggcctggtatgcgcgagccaggccgctggggcagcgccc
gagggcaccgggctctgcgtgtgcgcgcagcgcggcaccgtctgcggctccgacggtcgc
tcgtaccccagcgtctgcgcgctgcgcctgcgcgctcggcacacgccccgcgcgcacccc
ggtcacctgcacaaggcgcgcgacggcccttgcgagttcgttcctatcactcgtttttat
aactgctttcctcagccgttaattcacaggcaattctctttgtctccagacaggagacag
agtgagaccctgtctaaaaagaagaagaagaaggaggaggaggaggaggaggaggaggag
ggggaggaggagaaggaagaagaaggatgcaaaagcaatttccaacacaccattaacttt
aaagaaatctcagagggatttgggaagattttttcattccagccatcaatgatcgatata
attgacgaggcctctacactgcacgttgcccaacacgctgtggtgctggatgccagggtg
gctgagttgctgtccaatgcagctcctgtggtcgtcgttcctccccgaagtgttcacaac
gtcaccggggcgcaggtgggcctgtcctgtgaagtgagggctgtgcctaccccagtcatc
acgtggagaaaggtcacgaagtcccctgagggcacccaagcactggaggagctgcctggg
gaccatgtcaatatagctgtccaagtgcgagggggcccttctgaccatgaggccacggcc
tggattttgatcaaccccctgcgaaaggaggatgagggtgtgtaccagtgccatgcagcc
aacatggtgggagaggctgagtcccacagcacagtgacggttctagatctgagtaaatac
aggagcttccacttcccagctcccgatgaccgcatgtga

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_6|112_aa
MVLTSKEHQGSKGHSWHQKFKTDIVTPEVMVGFFVIFWSRLSVLGSKTFEVVTFIELKLL
PYPPYLGHLLEHTEHGFLSYSPVSSTGQVYSEPSESLLDEEQMSQCISESTD

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_6|339_bp
atggtgctgacttcaaaggaacatcaagggtccaaggggcacagctggcaccaaaagttc
aaaacagatattgtgacgccagaagtgatggttggattttttgttatattttggagtagg
ctttcagttcttggatctaaaacatttgaagtagtaacattcattgagctgaaattgctt
ccctatccaccctacctgggccaccttcttgagcacacagagcatggcttcctcagctac
tccccagtgtccagcacaggccaggtgtacagcgagccttctgagagcttgctggatgaa
gaacaaatgagtcaatgcatcagtgaatctacagattag

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_7|456_aa
MAMRTRQLNGTCTSSVDMELFLHYSLIPSAQAVDMLRSQPRALEKRESTDVRTEARGDLS
CRPLDFVGTFSNRWSYGITFGATANKVMFLFSEGYQPLQIPQWAQAFELLIGGIEVGLSH
FPFFACLSSEFQLVSSILGFCYSDLTAWAVPCIPSSGEMMVGFHICVASPALEITLSPCI
SHQARRRPAGATEDEVARSAKKMDEIVQEKNTAGALGLLTELQNVLELLRSTGTGMLLNV
SLKQSTDEEVTSLAKSFVKSWKTLPDEPSTEKDPNEKRIEPAMTSQNSKRNASNSVRMKY
REMLAAALRTGDDCIEMGADEEELGSRIEEAVDPERGNTGMKYKNRVQSKISNLTDAKNP
NLRKNASCGNIPPDLLARMSAEEMASDELKEMHKNLTKEAIREHQMAKTGGTQPDSLTCG
KCKKNCTSTQVQACSVGEPMATFVDCNECGNQQKFC

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_7|1371_bp
atggcgatgaggaccaggcagttaaatggcacttgtaccagctcggtggacatggagctc
ttccttcattattccctcatcccatcagctcaagctgtggacatgctgaggtctcagcca
agggctctggagaagagagaaagcacagatgtcagaactgaggcaaggggtgacctgagc
tgcaggcctctggacttcgtgggcactttcagtaaccgatggtcctatggaatcaccttt
ggggccacagctaataaggtcatgtttttgttctcagaaggctaccagcccctgcagatc
ccgcagtgggcccaagcctttgagcttctgattggaggcattgaagtcggcctgtcccac
ttccccttctttgcctgcctctcgtcggaattccagctggtcagctccatcttgggcttc
tgctactctgatctgacagcatgggctgtaccgtgcattccctcctctggagaaatgatg
gtaggtttccacatctgtgtagcatctcccgctctggagatcaccctgagcccttgcatc
tcccaccaggcacggaggagacctgccggagccacggaggatgaggtggcccgcagtgct
aagaagatggacgagatagtgcaggagaagaacacggccggagcactgggtttgttaacc
gagcttcagaatgttctggaattactgcggtccacaggaactggaatgttacttaatgtt
agtctcaagcagagtacagatgaagaagttacatctctagcaaagtctttcgtcaaatcc
tggaaaacgttaccagatgagccatcaactgagaaagaccccaacgaaaagcgaatagaa
cctgcaatgacatcacagaatagcaaaagaaacgcttctaattctgtgcggatgaagtac
agggagatgcttgctgcagctcttcgaacaggagatgactgcattgaaatgggagctgat
gaggaagaattaggatctcgaattgaggaagctgtagatccagaaagagggaatacaggc
atgaagtacaaaaatagagtccaaagtaagatatcaaatcttacagatgcaaagaatcca
aatttaaggaaaaatgcatcgtgtgggaatattcctcctgacttacttgctagaatgtcc
gcagaagaaatggctagcgatgagctcaaagagatgcacaaaaacttgacgaaagaagcc
atcagagagcatcagatggccaagacaggtggaacccagcctgattcgctcacatgtggc
aaatgtaaaaagaattgcacttccacacaggtacaagcctgcagtgttggtgaaccaatg
gcaacgtttgttgactgtaatgaatgtggaaatcaacagaagttctgttga

>gi568815589f:38295749_38497299|GENSCAN_predicted_peptide_8|138_aa
XWLALRFFVARDSAATFIGQWRTDLGEPEMLRELARETLGLCTRSAPQDKGLGGEVPRGR
LRPVDLCEGAREPPDGAPGCGDPLERYLDSQDPRRRSSTTHRPPPSRVRTLSPQRVSPTP
SPCPGSLVPARERRRSGP

>gi568815589f:38295749_38497299|GENSCAN_predicted_CDS_8|417_bp
nggtggctggcgctgcgcttcttcgtggcccgcgacagtgcggccaccttcatcggccag
tggcgcactgatctgggcgagcccgaaatgctccgcgagctggcgagggagacactgggc
ctctgcacccggtcagctccccaagataaaggcctcggaggggaagttccgcgtgggaga
ctccggcctgttgatctctgtgagggtgcccgggagccgcctgacggcgcgcctgggtgt
ggcgacccgctggagcgctacctggacagtcaggacccgcgccgccgctcctccaccacc
caccgcccgcccccgtcgagggtccgcaccctgtccccgcagagggtgtcgcccacccct
agcccctgccctggtagcctggtccccgcgagagagcgccggcgctccggaccctag