GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:00:56

Sequence gi568815587f:66956903_67171599 : 214697 bp : 50.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   1120   1473  354  0  0   74   48   183 0.870   6.96
 1.02 PlyA +   4294   4299    6                               1.05

 2.00 Prom +   6010   6049   40                              -5.16
 2.01 Init +   9107   9159   53  1  2  106   54    17 0.486   0.77
 2.02 Intr +   9294   9347   54  0  0   92   50    64 0.349   1.09
 2.03 Term +  12992  13199  208  2  1   32   46   182 0.577   5.21
 2.04 PlyA +  13236  13241    6                               1.05

 3.00 Prom +  14580  14619   40                              -6.26
 3.01 Init +  18461  18736  276  1  0   90   80   104 0.457   6.80
 3.02 Intr +  26111  26282  172  1  1  104   96    -2 0.321   1.72
 3.03 Intr +  26525  26606   82  0  1   94   93    42 0.860   4.00
 3.04 Intr +  27125  27188   64  2  1   67   94    48 0.725   2.02
 3.05 Intr +  27290  27398  109  1  1   72   85    -6 0.327  -2.64
 3.06 Intr +  32203  32334  132  2  0   54   40   134 0.080   5.82
 3.07 Intr +  42900  42974   75  1  0  130   66     6 0.061   2.09
 3.08 Intr +  53646  53749  104  1  2   79   53    77 0.141   3.19
 3.09 Intr +  55834  55891   58  0  1   63  116   -17 0.130  -2.94
 3.10 Intr +  58494  58553   60  1  0  109   46    36 0.115   0.21
 3.11 Intr +  64967  65011   45  0  0  148  116    27 0.960   9.88
 3.12 Intr +  68669  68737   69  0  0   88   94    45 0.851   4.25
 3.13 Intr +  73220  73276   57  0  0  125  101    70 0.892  10.86
 3.14 Intr +  77743  77936  194  2  2   52  100   159 0.146  12.71
 3.15 Intr +  82909  83301  393  0  0  120  114   659 0.995  66.55
 3.16 Intr +  86736  86951  216  2  0  118  115   352 0.997  39.60
 3.17 Intr +  87691  87811  121  0  1   89   90   218 0.999  22.17
 3.18 Intr +  88842  88975  134  1  2  107   94   300 0.999  32.86
 3.19 Term +  91682  91855  174  1  0  111   43   260 0.923  21.56
 3.20 PlyA +  93884  93889    6                               1.05

 4.00 Prom +  94562  94601   40                              -7.56
 4.01 Init +  95024  95141  118  1  1   77  111    21 0.389   3.12
 4.02 Intr +  99180  99311  132  1  0   88    2    96 0.449   1.62
 4.03 Intr +  99987 100132  146  1  2   62  105   259 0.670  25.00
 4.04 Intr + 108994 109081   88  0  1  120   94   141 0.994  17.44
 4.05 Intr + 109836 109945  110  1  2   61   77   236 0.913  19.80
 4.06 Intr + 113523 113657  135  2  0   99   53   239 0.997  22.26
 4.07 Term + 114533 114700  168  1  0  103   53   200 0.993  15.88
 4.08 PlyA + 116992 116997    6                               1.05

 5.04 PlyA - 119314 119309    6                               1.05
 5.03 Term - 120459 120287  173  1  2   83   31   116 0.424   3.39
 5.02 Intr - 138254 138036  219  0  0   94   75    36 0.047   1.17
 5.01 Init - 139998 139854  145  0  1   91  109    -4 0.447   2.28
 5.00 Prom - 154853 154814   40                              -4.26

 6.07 PlyA - 155794 155789    6                               1.05
 6.06 Term - 156329 156270   60  2  0   98   54    63 0.783   1.70
 6.05 Intr - 161560 160944  617  2  2   68   65   214 0.000   9.17
 6.04 Intr - 162626 162433  194  1  2  121   -7   204 0.000  13.34
 6.03 Intr - 177150 177120   31  1  1   53   82    69 0.007  -0.01
 6.02 Intr - 194377 194188  190  1  1   44   70    55 0.449  -1.54
 6.01 Init - 201709 201650   60  1  0   37   88    97 0.862   5.85
 6.00 Prom - 207164 207125   40                              -2.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 162883 162380  504  1  0   69   46   286 0.875  16.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:66956903_67171599|GENSCAN_predicted_peptide_1|117_aa
MRQPAGGRCGGALGGCSRGRVRGRVQPAEPPREGEGRRPLRRVAHRAQPVAVSSSRHSRS
PRRLCARDPYISVPRSGAGARPPAPTRRGKRTVRSAADTHLLAVASPRRRLYRCCLH

>gi568815587f:66956903_67171599|GENSCAN_predicted_CDS_1|354_bp
atgaggcagcccgcaggcggacgctgcggaggggcgctcgggggctgcagccgggggcgg
gtccgggggcgggtccagccggccgagcccccgcgcgagggggaggggcgccgtccgctg
cgtcgcgtcgcgcaccgcgcacagcccgtcgctgtctcctccagccgtcactcgcggagc
ccgcgccgcctttgcgcgcgcgacccttacataagcgtccctcgcagcggtgccggcgca
cgtccacccgctccgacccgccgcgggaagaggaccgtgcggagcgcggcggacactcac
ctcctcgccgtcgccagtcctcgccgccgcctctaccgctgctgcctccactga

>gi568815587f:66956903_67171599|GENSCAN_predicted_peptide_2|104_aa
MLSELAGMLSSLHPNGMRLNPAIVSFMKLSKATLMVQLPHSEMVFGEAQVAAINHQQTEA
LSPTIRKELNYANNHKNELGSRFTPEGPGEELTVASERSEPETC

>gi568815587f:66956903_67171599|GENSCAN_predicted_CDS_2|315_bp
atgctgtctgaacttgctggtatgctgtcctccctacaccccaatggtatgagacttaac
ccagccattgtctccttcatgaagctctccaaggccactctcatggtccagctgccacat
agtgagatggtctttggagaggcccaagtagcagcaatcaaccatcaacaaacagaagcc
ctcagtcccacaatccgaaaagaattgaattatgcaaacaaccacaagaatgagcttgga
agcagattcaccccagaaggacctggagaagagttgactgtagcctccgagagatccgag
ccagagacctgctaa

>gi568815587f:66956903_67171599|GENSCAN_predicted_peptide_3|844_aa
MGTGLRSQSLREPRPSYGKLQEPWGRPQEGQLRRALSLRQGQEKSRSQGLERGTEGPDAT
AQERVPGSLGDTEQLIQAQRRGSRWWLRRYQQGPRHLDIGCGGGSMVAPKRCVHVLIPEP
VNVTLFGKKVFAGVIKLRSWEEEIIVDYPELRENPFLLLSATGFGVICYSSHRKLTRLLQ
VLPILVLSAHTNFTVMGQGDDKFPCQLLGQGEVTGGGVDRTELGQSHGRAGFKPASPTST
TPCSKAPSPIDHPRAEECERTARDWQAAPPAAPVRDPLGLFFSLLDTVPSLLASIGVRHD
RTVGLFQLHLNWLPSTLLVTPATTSKCLLWLPYILLMPEVGTVINYILQLRKLRHREGCS
PMICAMDSCFQGPHLYPGPGNEMKTKAPPVGEAKDTVLLPGRPPGCQREPTEVVPVTVTA
ADIMAVDVAEYHLSVIKSPPGWEVGVYAAGALALLGIAAVSLWKLWTSGSFPSPSPFPNY
DYRYLQQKYGESCAEAREKRVPAWNAQRASTRGPPSRKGSLSIEDTFESISELGPLELMG
RELDLAPYGTLRKSQSADSLNSISSVSNTFGQDFTLGQVEVSMEYDTASHTLNVAVMQGK
DLLEREEASFESCFMRVSLLPDEQIVGISRIQRNAYSIFFDEKFSIPLDPTALEEKSLRF
SVFGIDEDERNVSTGVVELKLSVLDLPLQPFSGWLYLQDQNKAADAVGEILLSLSYLPTA
ERLTVVVVKAKNLIWTNDKTTADPFVKVYLLQDGRKMSKKKTAVKRDDPNPVFNEAMIFS
VPAIVLQDLSLRVTVAESSSDGRGDNVGHVIIGPSASGMGTTHWNQMLATLRRPVSMWHA
VRRN

>gi568815587f:66956903_67171599|GENSCAN_predicted_CDS_3|2535_bp
atgggaacagggctgcgaagtcagtccttgcgagagccccgaccctcctatggaaagctg
caggagccctgggggaggccccaggagggccaactccgcagggcgctaagcctcagacag
gggcaagagaagtccaggtcccagggcctcgagagaggcacagaagggccagatgccact
gcccaggagcgggtgccggggagcctgggggacacagagcagctgatccaagcccagcga
agaggcagccggtggtggctgaggcggtaccaacagggccccaggcacttagacatcggg
tgtggagggggttcaatggtggccccaaagagatgtgtccatgttctaatccctgaacct
gtgaatgtgaccttatttggaaaaaaggtctttgcaggtgtgattaagttaagatcttgg
gaggaagagatcattgtggattacccagaactgcgagagaacccatttctgttgctttca
gccactggatttggtgtcatttgttacagcagccacaggaaactcacaagacttcttcag
gtcttgcccatcctggttttgtctgcacatacgaacttcacggtcatggggcagggagat
gataaatttccttgccagctcttagggcagggtgaggtgactggaggaggcgtggaccgc
actgagctgggccagagccatggcagggctgggttcaaacctgcctccccgacgagcacc
accccctgctccaaggcgcccagtcccatcgaccacccaagggctgaggaatgcgagcgc
acggcgcgggactggcaggcagctccacctgcagccccggtgcgggatccactaggtctc
ttcttcagcctcttggacacagtgccatcgctattggcatcaataggggtcaggcacgac
aggacagtaggcctgttccagctccatcttaactggctgcccagtaccctgctggtgaca
cctgccaccacctccaaatgccttctgtggctgccctacatcctgcttatgccagaggtt
ggcacggttattaactacattttgcagttgaggaaactgaggcacagagaaggctgctct
ccaatgatctgtgctatggacagctgcttccaggggccacatctttaccctggtccagga
aatgaaatgaagacaaaagcgccccctgtgggtgaagccaaagacacagtccttctgcct
ggcagacctccaggctgccagcgggagcccactgaggtggtcccagtcacagtcactgca
gcagacatcatggctgtggatgtggcagaataccatctgagcgtcatcaagagcccccct
ggctgggaggtgggtgtctatgctgcaggggccctggccctgctgggaatcgcagctgtg
agcctgtggaagctctggacgtcggggagcttccccagcccctctccgttccccaattac
gactacaggtaccttcagcagaagtacggcgagagctgcgcagaggccagggagaagaga
gtgcctgcctggaatgcccagcgggccagcacgcggggaccacccagccgcaaaggcagt
ctcagcattgaggacacctttgagagcatcagtgaactggggcctctggagctgatgggc
cgggagttggacctggccccctatgggaccctccggaagtcccagtcggccgactccctg
aactccatctcctccgtgagcaacacctttgggcaggacttcacactgggccaggtggag
gtgagcatggagtacgacactgcctcccacacgctgaacgtggcggtgatgcagggcaag
gacctcctggagcgggaggaggccagcttcgagtcctgcttcatgcgcgtcagcctgctg
ccggacgagcagatcgtgggcatttctcggatccagagaaatgcctactccatcttcttt
gatgagaagttctccatccccctggatcccacagccctggaggagaagagcctgcggttt
tctgtatttggcatcgatgaggatgagcgcaacgtcagcacgggggtggtggagctgaag
ctttctgtgcttgacctcccgctgcagcccttcagtggctggctctatttacaggaccag
aacaaggccgccgatgctgtgggggagatcctgctctccctcagctacctccccacagcc
gagcgcctcaccgtggtcgtggttaaggccaagaacctcatctggaccaacgacaagacc
acagcggaccccttcgtcaaggtgtacctgctgcaggatgggaggaagatgagcaaaaag
aagacagccgtgaagagggatgaccccaacccggtgttcaacgaagccatgatcttctcg
gtgccagccattgtgctccaggacctgtctctccgcgtgacggtggctgagagcagcagc
gacggccgtggggacaacgtgggccatgtcatcattgggccgtcagccagtggcatggga
accacacattggaaccagatgttggccacgctgcgcaggcccgtgtccatgtggcacgct
gtccggcgaaactag

>gi568815587f:66956903_67171599|GENSCAN_predicted_peptide_4|298_aa
MDKDELMENSQQLLGGLSTTGTDSEELLRQPMRRAVAGADSERFPDSLNVGEELFSPTPV
PLPVPTPVVVLITLMSCVSTILSPPGPGMTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTS
LLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVL
LLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVT
YHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRNFWRRITQGFCVVT

>gi568815587f:66956903_67171599|GENSCAN_predicted_CDS_4|897_bp
atggataaggatgagctgatggagaattcccagcagctcctgggaggcctgtccaccaca
gggactgactccgaagagcttctgaggcaaccaatgagacgggctgtggcaggagccgac
tctgaaaggtttcctgactccctcaacgtgggcgaggagctcttttcccctactcccgtc
ccgctgcctgtccctactcccgttgtagttctgatcacactgatgtcctgcgtgtctacc
attctaagcccgcccggccccgggatgacggcggcccaggccgcgggtgaggaggcgcca
ccaggcgtgcggtccgtcaaggtggtcctggtgggcgacggcggctgcgggaagacgtcg
ctgctgatggtcttcgccgatggggccttccccgagagctacacccccacggtgtttgag
cggtacatggtcaacctgcaagtgaaaggcaaacctgtgcacctccacatctgggacaca
gcagggcaagatgactatgaccgcctgcggcccctgttctaccctgacgccagcgtcctg
ctgctttgcttcgatgtcaccagcccgaacagctttgacaacatctttaaccggtggtac
ccagaagtgaatcatttctgcaagaaggtacccatcatcgtcgtgggctgcaagactgac
ctgcgcaaggacaaatcactggtgaacaagctccgaagaaacggattggagcctgtgacc
taccacaggggccaggagatggcgaggtccgtgggcgcggtggcctacctcgagtgctcg
gctcggctccatgacaacgtccacgccgtcttccaggaggccgccgaggtggccctcagc
agccgcggtcgcaacttctggcggcggattacccagggcttttgcgtggtgacctga

>gi568815587f:66956903_67171599|GENSCAN_predicted_peptide_5|178_aa
MGIEFELADVGRKARWKQKPPVPHPTARASLLGGSLLGSKAELGGQEAGAWASSMLAWQS
YPTPPPPPGGLLIPGIISSADAAGFKVGRGASELGEAWELLCLQPRDPGRVGKGNLSEQA
PEGAAEGFCAGTHLCFGGWLCQGEEDGGGREPAGWETYVMVQARMDEGLNGARIHGIH

>gi568815587f:66956903_67171599|GENSCAN_predicted_CDS_5|537_bp
atgggcattgagtttgaacttgcagatgtgggaaggaaagcccgctggaaacaaaaacct
cctgtgccacatcccactgcaagagccagcctgctgggaggcagcctgctgggctctaag
gcagagttgggagggcaggaggcaggtgcctgggcctctagcatgctggcctggcaatcc
taccccaccccacccccgccccctggcgggcttttaatacctggcataatctcttctgct
gatgcagctggttttaaggtgggaagaggggccagtgaacttggagaagcttgggagctg
ctctgcctgcagcccagagacccaggacgggtgggcaaaggaaacttgagcgaacaggca
ccagagggggctgctgaaggcttctgtgcagggacgcacttatgctttggaggatggctc
tgccagggtgaggaggatggaggaggccgagagcctgcaggctgggagacttatgtgatg
gtccaagcccgaatggatgagggtctgaatggagcacggattcatggcattcattaa

>gi568815587f:66956903_67171599|GENSCAN_predicted_peptide_6|383_aa
MRYHYTTVKIENTTPNAGKEQPVASGYHSVQHNSRLLEAAAEPKLKKSATKRVIQYMYVY
LLKQRMLKQFCIFSIIGQTYSYQESTLYNFNKDRSGSALRDEPPGYSPVAEEGFRGMGPL
ALPLLPERPLPRKDRAATGPAAGKVLREPPPPPPLPGRGPGAAATGPVCPGPGGSSVQRP
GPASPTARRSEGAGNRSSMSVLGSAPRGCCRRLTRASTGTRRRSGLRDGPGAVAAGAPTA
GRRRPARWPRKPPLLGHAQLSAAPVPPAARVGRDPAPGESGRPPRRGARAAPGPRPDPAA
LGRGGRGRPGREDVSCWCAQLRAGVSDGAAAARAAPALPTDRLPRPDSCPTGQQAPNVDG
ARPEGIRYLSSVSAKAGVPSATL

>gi568815587f:66956903_67171599|GENSCAN_predicted_CDS_6|1152_bp
atgagataccactacacaacggtcaaaattgaaaatacaacaccaaatgctggcaaggag
caacctgtggctagtggctaccatagcgtacaacacaactctaggctgttggaagcagca
gcagaaccaaagctgaaaaaatcagccaccaagagagtgattcaatatatgtatgtgtat
ctcctaaagcaacgtatgctgaaacagttctgtattttcagcataattggtcaaacatac
agttaccaagaaagcacactgtacaacttcaacaaggacaggtctggctccgcgctgcgg
gacgagccccccggctactccccagtcgcagaagagggattccgggggatgggccccctg
gcgttgcccctcctcccggagcgtcccctgcccaggaaagacagagcggccacgggccca
gccgctgggaaggtgctccgagagccgccgccgccgccgccgctgccggggaggggcccc
ggcgccgccgccacggggcccgtctgccctgggcccgggggctcctcggtgcagcggcct
ggccccgcctcacccactgctcgtcgctccgaaggggcaggaaacaggagtagcatgtct
gtcctgggctcggctccccgggggtgctgcaggcgcttaacaagggcgtccacaggtacc
aggcgcagaagcggtctccgcgacggcccgggggcggtggcggccggcgcgcccaccgcc
ggccggaggcgcccggcgaggtggcccaggaagcccccgctcctcggccacgctcagctt
tccgccgcgccggtgcccccggcggcccgggtgggacgtgaccccgcccccggcgagtcg
gggcgccccccacggaggggtgcgcgggccgcccccggcccccggcccgaccctgccgcc
ctgggccgtggcgggcgcgggaggcccggccgggaagatgtctcctgttggtgcgcgcag
cttcgcgcgggggtcagcgacggggcagcagccgcccgagctgcgccggccctgcccacg
gaccgactcccgcggcccgacagctgcccgacgggccagcaggctccgaacgtcgacgga
gcccggccggagggcattcgctacctttcatcagtttctgctaaagctggtgttccttca
gccactttgtga