FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2680, 427 aa 1>>>pF1KE2680 427 - 427 aa - 427 aa Library: /omim/omim.rfq.tfa 61573307 residues in 86401 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1931+/-0.000333; mu= 19.0885+/- 0.021 mean_var=68.6748+/-13.376, 0's: 0 Z-trim(114.5): 159 B-trim: 21 in 1/56 Lambda= 0.154766 statistics sampled from 24434 (24607) to 24434 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.285), width: 16 Scan time: 6.600 The best scores are: opt bits E(86401) NP_004631 (OMIM: 142560) spliceosome RNA helicase ( 428) 2594 588.0 1.5e-167 NP_542165 (OMIM: 142560) spliceosome RNA helicase ( 428) 2594 588.0 1.5e-167 NP_001958 (OMIM: 601102) eukaryotic initiation fac ( 407) 891 207.8 4.3e-53 NP_001407 (OMIM: 602641) eukaryotic initiation fac ( 406) 874 204.0 6e-52 NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411) 858 200.4 7.2e-51 NP_004388 (OMIM: 600326) probable ATP-dependent RN ( 483) 838 196.0 1.8e-49 NP_001244120 (OMIM: 600326) probable ATP-dependent ( 483) 838 196.0 1.8e-49 XP_005271474 (OMIM: 600326) PREDICTED: probable AT ( 483) 838 196.0 1.8e-49 NP_009135 (OMIM: 606168) probable ATP-dependent RN ( 824) 776 182.3 4.1e-45 NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 735 173.0 1.4e-42 NP_009173 (OMIM: 605812) ATP-dependent RNA helicas ( 479) 716 168.7 2.8e-41 XP_011521136 (OMIM: 605812) PREDICTED: ATP-depende ( 484) 716 168.7 2.9e-41 XP_011521134 (OMIM: 605812) PREDICTED: ATP-depende ( 539) 716 168.8 3.1e-41 NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 686 162.2 4.4e-39 NP_001244103 (OMIM: 605812) ATP-dependent RNA heli ( 370) 668 157.9 3.9e-38 XP_016878379 (OMIM: 605812) PREDICTED: ATP-depende ( 370) 668 157.9 3.9e-38 XP_006721190 (OMIM: 605812) PREDICTED: ATP-depende ( 370) 668 157.9 3.9e-38 NP_001014449 (OMIM: 605812) ATP-dependent RNA heli ( 370) 668 157.9 3.9e-38 NP_001244102 (OMIM: 605812) ATP-dependent RNA heli ( 370) 668 157.9 3.9e-38 NP_001191439 (OMIM: 602641) eukaryotic initiation ( 347) 655 155.0 2.8e-37 XP_011523824 (OMIM: 268305,608546) PREDICTED: euka ( 390) 651 154.2 5.6e-37 XP_011541093 (OMIM: 607663) PREDICTED: ATP-depende ( 482) 641 152.0 3.1e-36 NP_037396 (OMIM: 607663) ATP-dependent RNA helicas ( 483) 641 152.0 3.1e-36 XP_011541092 (OMIM: 607663) PREDICTED: ATP-depende ( 486) 641 152.0 3.2e-36 NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619) 641 152.1 3.8e-36 XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619) 641 152.1 3.8e-36 XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619) 641 152.1 3.8e-36 XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619) 641 152.1 3.8e-36 NP_001014451 (OMIM: 605812) ATP-dependent RNA heli ( 448) 636 150.9 6.4e-36 NP_001244101 (OMIM: 605812) ATP-dependent RNA heli ( 453) 636 150.9 6.5e-36 XP_011521135 (OMIM: 605812) PREDICTED: ATP-depende ( 508) 636 150.9 7.1e-36 NP_001317367 (OMIM: 607663) ATP-dependent RNA heli ( 369) 597 142.1 2.3e-33 XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 589 140.4 9.1e-33 XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 589 140.4 1.1e-32 XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 589 140.4 1.1e-32 XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 589 140.4 1.2e-32 NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 589 140.5 1.2e-32 XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 579 138.3 6.7e-32 XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 579 138.3 7.9e-32 NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 579 138.3 7.9e-32 XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 579 138.3 7.9e-32 NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 579 138.3 7.9e-32 XP_011540947 (OMIM: 600326) PREDICTED: probable AT ( 434) 571 136.3 1.5e-31 NP_001244104 (OMIM: 605812) ATP-dependent RNA heli ( 328) 561 134.0 5.5e-31 NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 565 135.1 5.6e-31 NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 565 135.1 5.6e-31 NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 563 134.7 7.1e-31 NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 554 132.6 2.7e-30 NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 554 132.6 2.7e-30 NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 554 132.6 2.7e-30 >>NP_004631 (OMIM: 142560) spliceosome RNA helicase DDX3 (428 aa) initn: 2585 init1: 2519 opt: 2594 Z-score: 3129.0 bits: 588.0 E(86401): 1.5e-167 Smith-Waterman score: 2594; 90.0% identity (97.7% similar) in 428 aa overlap (1-427:1-428) 10 20 30 40 50 pF1KE2 MAEQDVENDLLDY-DEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI :::.::.:.:::: :.: : : ... :: :::.::::::::::::::::::::::::: NP_004 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC ::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::: NP_004 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV :::::::::::::::::::::.:::.:::::::::::::::::::::.:::::::::::. NP_004 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 RNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR ::.:..::..:::.::::::::::::::::::::::.:::::: :::::::::.:::::: NP_004 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC ::::::::.::::::::::::::::::::::.::::::::::::::::::.::::::::: NP_004 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF .:::::::::::::::::::: ::::::::::::::::::::::::::::::::::::.: NP_004 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI ::::::::::::::::::::::::::::::::::::::::::::::::::..:::.:::: NP_004 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 370 380 390 400 410 420 420 pF1KE2 STYIEQSR :.::::.: NP_004 SSYIEQTR >>NP_542165 (OMIM: 142560) spliceosome RNA helicase DDX3 (428 aa) initn: 2585 init1: 2519 opt: 2594 Z-score: 3129.0 bits: 588.0 E(86401): 1.5e-167 Smith-Waterman score: 2594; 90.0% identity (97.7% similar) in 428 aa overlap (1-427:1-428) 10 20 30 40 50 pF1KE2 MAEQDVENDLLDY-DEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI :::.::.:.:::: :.: : : ... :: :::.::::::::::::::::::::::::: NP_542 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC ::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::: NP_542 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV :::::::::::::::::::::.:::.:::::::::::::::::::::.:::::::::::. NP_542 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 RNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR ::.:..::..:::.::::::::::::::::::::::.:::::: :::::::::.:::::: NP_542 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC ::::::::.::::::::::::::::::::::.::::::::::::::::::.::::::::: NP_542 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF .:::::::::::::::::::: ::::::::::::::::::::::::::::::::::::.: NP_542 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI ::::::::::::::::::::::::::::::::::::::::::::::::::..:::.:::: NP_542 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 370 380 390 400 410 420 420 pF1KE2 STYIEQSR :.::::.: NP_542 SSYIEQTR >>NP_001958 (OMIM: 601102) eukaryotic initiation factor (407 aa) initn: 797 init1: 411 opt: 891 Z-score: 1074.3 bits: 207.8 E(86401): 4.3e-53 Smith-Waterman score: 891; 38.3% identity (72.4% similar) in 373 aa overlap (46-417:35-403) 20 30 40 50 60 70 pF1KE2 EEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECI : :. :: :::.: :::.:: .:.. : NP_001 SADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAI 10 20 30 40 50 60 80 90 100 110 120 130 pF1KE2 PQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERF : :.::. ::.:: ::::.:... :::.: .. .::. ::::: ::.: . NP_001 IPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILAL 70 80 90 100 110 120 140 150 160 170 180 190 pF1KE2 SKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLD . :: .. . .:: ..... . :. . ::.:::::::.. .. : .: : .: :::: NP_001 GDYM-GATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLD 130 140 150 160 170 180 200 210 220 230 240 250 pF1KE2 ECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETK : :.:: . .. .. :::. : ...:::. :. : .:::.::....: : . NP_001 EADEMLSR-GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-E 190 200 210 220 230 240 260 270 280 290 300 310 pF1KE2 LTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAI :::.:..:.:.... : : : :: ..: ..:..::... .. :.. . ..: . NP_001 LTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVS 250 260 270 280 290 300 320 330 340 350 360 370 pF1KE2 AIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRV :.: : :.:: ...:.. . :.:..:.:..::.:...:..:.:::.: . ..:.::. NP_001 ALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI 310 320 330 340 350 360 380 390 400 410 420 pF1KE2 ARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR .:.:::: ::.::.::..: : .:: :.. ....: :.: .. NP_001 GRGGRFGRKGVAINFVTEE-DKRILRDIETFYNTTVEEMPMNVADLI 370 380 390 400 >>NP_001407 (OMIM: 602641) eukaryotic initiation factor (406 aa) initn: 781 init1: 405 opt: 874 Z-score: 1053.8 bits: 204.0 E(86401): 6e-52 Smith-Waterman score: 874; 36.5% identity (72.0% similar) in 389 aa overlap (30-417:19-402) 10 20 30 40 50 60 pF1KE2 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV :. :.... : .: : :. :. :::.: NP_001 MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDS-FDDMNLSESLLRGIY 10 20 30 40 70 80 90 100 110 120 pF1KE2 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH :::.:: .:.. : : :.::. ::.:: ::::.:... ::::: . .::. NP_001 AYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAP 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE2 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR ::::: ::.: .. :: ... . .:: ... . . :. . ::..::::::.. .. NP_001 TRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLN 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE2 NRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRK : .: : .: ::::: :.:: . .. .. .::. . : ...:::. .:. : .: NP_001 RRYLSPKYIKMFVLDEADEMLSR-GFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKK 170 180 190 200 210 220 250 260 270 280 290 pF1KE2 FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQVIIFVKSVQRC ::.::....: : .:::.:..:.:.... : : : :: ..: ..:..::... .. NP_001 FMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKV 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF :.. . ..: . :.: : :.:: ...:.. . :.:..:.:..::.:...:..:. NP_001 DWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE2 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI :::.: . ..:.::..:.:::: ::.::..:..: : . : :.. ..... :.: .. NP_001 NYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEE-DKRTLRDIETFYNTSIEEMPLNVAD 350 360 370 380 390 400 420 pF1KE2 STYIEQSR NP_001 LI >>NP_055555 (OMIM: 268305,608546) eukaryotic initiation (411 aa) initn: 715 init1: 379 opt: 858 Z-score: 1034.4 bits: 200.4 E(86401): 7.2e-51 Smith-Waterman score: 858; 35.9% identity (71.6% similar) in 373 aa overlap (46-417:40-407) 20 30 40 50 60 70 pF1KE2 EEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECI : . :. .:::.: :::.:: .:.. : NP_055 SGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 10 20 30 40 50 60 80 90 100 110 120 130 pF1KE2 PQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERF : : : ::. :..:: ::::.: ...:: .. .. .:.. ::::: ::.: . NP_055 KQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLAL 70 80 90 100 110 120 140 150 160 170 180 190 pF1KE2 SKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLD . :: .:. . .:: .. .: . : . :::.:::::.. ..: ::. . .: .::: NP_055 GDYM-NVQCHACIGGTNVGEDIRKLDYG-QHVVAGTPGRVFDMIRRRSLRTRAIKMLVLD 130 140 150 160 170 180 200 210 220 230 240 250 pF1KE2 ECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETK : :.::.. ..... ...: : : ...:::: ..: . ::: ::....: . . NP_055 EADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRD-E 190 200 210 220 230 240 260 270 280 290 300 310 pF1KE2 LTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAI :::.:..:..: .. : : : :: :.: ..:..:: .. .. :.. . : :: . NP_055 LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS 250 260 270 280 290 300 320 330 340 350 360 370 pF1KE2 AIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRV ..: : :.:: : ...:.. :.:..:....::.:. .:....:::.:.. . :.::. NP_055 SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI 310 320 330 340 350 360 380 390 400 410 420 pF1KE2 ARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR .:.::.: ::.::.::... : .:: :... . ... :.: .. NP_055 GRSGRYGRKGVAINFVKND-DIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>NP_004388 (OMIM: 600326) probable ATP-dependent RNA he (483 aa) initn: 725 init1: 358 opt: 838 Z-score: 1009.3 bits: 196.0 E(86401): 1.8e-49 Smith-Waterman score: 838; 35.7% identity (69.7% similar) in 406 aa overlap (23-425:73-472) 10 20 30 40 50 pF1KE2 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKK-DIKGSYV-SIHSSGFRDFL ... ::: :: : : : ... :.:. NP_004 NQLKNTNTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYC 50 60 70 80 90 100 60 70 80 90 100 110 pF1KE2 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN :: ::: .: . :.:.:: .:.: :: :. : :.: .::.: ::...... :.... . NP_004 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 110 120 130 140 150 160 120 130 140 150 160 pF1KE2 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLK-KNCPHVVV .. ..:. :::::.:.:. . ::.: ..:: . :: ... : ... . :::. NP_004 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD--IMRLDDTVHVVI 170 180 190 200 210 220 170 180 190 200 210 220 pF1KE2 GTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT .:::::: :... .. .:. .:::: ::.: : :. . ...:. :...: ...::: NP_004 ATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSAT 230 240 250 260 270 230 240 250 260 270 280 pF1KE2 LSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQV . ... . .: :.:. . .: :::.:. :::. . . .: . : :.. :..:: NP_004 FPLSVQKFMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQS 280 290 300 310 320 330 290 300 310 320 330 340 pF1KE2 IIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG ::: .: :: ::. . . .. . :: : ::.: ...:.. : :: :.:: :: NP_004 IIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRG 340 350 360 370 380 390 350 360 370 380 390 400 pF1KE2 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN .::. ::.:.:.:.:. ..:::::..:.:::: ::::.... .: :....... .. NP_004 IDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTE 400 410 420 430 440 450 410 420 pF1KE2 VAELPEEIDISTYIEQSR . .: .:: : :. . NP_004 IKPIPSNIDKSLYVAEYHSEPVEDEKP 460 470 480 >>NP_001244120 (OMIM: 600326) probable ATP-dependent RNA (483 aa) initn: 725 init1: 358 opt: 838 Z-score: 1009.3 bits: 196.0 E(86401): 1.8e-49 Smith-Waterman score: 838; 35.7% identity (69.7% similar) in 406 aa overlap (23-425:73-472) 10 20 30 40 50 pF1KE2 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKK-DIKGSYV-SIHSSGFRDFL ... ::: :: : : : ... :.:. NP_001 NQLKNTNTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYC 50 60 70 80 90 100 60 70 80 90 100 110 pF1KE2 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN :: ::: .: . :.:.:: .:.: :: :. : :.: .::.: ::...... :.... . NP_001 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 110 120 130 140 150 160 120 130 140 150 160 pF1KE2 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLK-KNCPHVVV .. ..:. :::::.:.:. . ::.: ..:: . :: ... : ... . :::. NP_001 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD--IMRLDDTVHVVI 170 180 190 200 210 220 170 180 190 200 210 220 pF1KE2 GTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT .:::::: :... .. .:. .:::: ::.: : :. . ...:. :...: ...::: NP_001 ATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSAT 230 240 250 260 270 230 240 250 260 270 280 pF1KE2 LSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQV . ... . .: :.:. . .: :::.:. :::. . . .: . : :.. :..:: NP_001 FPLSVQKFMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQS 280 290 300 310 320 330 290 300 310 320 330 340 pF1KE2 IIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG ::: .: :: ::. . . .. . :: : ::.: ...:.. : :: :.:: :: NP_001 IIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRG 340 350 360 370 380 390 350 360 370 380 390 400 pF1KE2 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN .::. ::.:.:.:.:. ..:::::..:.:::: ::::.... .: :....... .. NP_001 IDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTE 400 410 420 430 440 450 410 420 pF1KE2 VAELPEEIDISTYIEQSR . .: .:: : :. . NP_001 IKPIPSNIDKSLYVAEYHSEPVEDEKP 460 470 480 >>XP_005271474 (OMIM: 600326) PREDICTED: probable ATP-de (483 aa) initn: 725 init1: 358 opt: 838 Z-score: 1009.3 bits: 196.0 E(86401): 1.8e-49 Smith-Waterman score: 838; 35.7% identity (69.7% similar) in 406 aa overlap (23-425:73-472) 10 20 30 40 50 pF1KE2 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKK-DIKGSYV-SIHSSGFRDFL ... ::: :: : : : ... :.:. XP_005 NQLKNTNTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYC 50 60 70 80 90 100 60 70 80 90 100 110 pF1KE2 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN :: ::: .: . :.:.:: .:.: :: :. : :.: .::.: ::...... :.... . XP_005 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 110 120 130 140 150 160 120 130 140 150 160 pF1KE2 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLK-KNCPHVVV .. ..:. :::::.:.:. . ::.: ..:: . :: ... : ... . :::. XP_005 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD--IMRLDDTVHVVI 170 180 190 200 210 220 170 180 190 200 210 220 pF1KE2 GTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT .:::::: :... .. .:. .:::: ::.: : :. . ...:. :...: ...::: XP_005 ATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSAT 230 240 250 260 270 230 240 250 260 270 280 pF1KE2 LSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQV . ... . .: :.:. . .: :::.:. :::. . . .: . : :.. :..:: XP_005 FPLSVQKFMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQS 280 290 300 310 320 330 290 300 310 320 330 340 pF1KE2 IIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG ::: .: :: ::. . . .. . :: : ::.: ...:.. : :: :.:: :: XP_005 IIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRG 340 350 360 370 380 390 350 360 370 380 390 400 pF1KE2 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN .::. ::.:.:.:.:. ..:::::..:.:::: ::::.... .: :....... .. XP_005 IDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTE 400 410 420 430 440 450 410 420 pF1KE2 VAELPEEIDISTYIEQSR . .: .:: : :. . XP_005 IKPIPSNIDKSLYVAEYHSEPVEDEKP 460 470 480 >>NP_009135 (OMIM: 606168) probable ATP-dependent RNA he (824 aa) initn: 775 init1: 370 opt: 776 Z-score: 931.1 bits: 182.3 E(86401): 4.1e-45 Smith-Waterman score: 783; 34.1% identity (65.9% similar) in 419 aa overlap (20-417:26-440) 10 20 30 40 pF1KE2 MAEQDVENDLLDYDEEEEPQAPQ-ESTPAPPK-----KDIK------GSYVSIH :.: : ::.: . .:.. :. . . NP_009 MAAAFEASGALAAVATAMPAEHVAVQVPAPEPTPGPVRILRTAQDLSSPRTRTGDVLLAE 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE2 SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLAT . :...::. .:... :::.:: :: . :: . :.:.. ::::: ::: :: . NP_009 PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE2 LQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKK :... : .. .:.. :::.: :: . .. : ... ::.:: ...:. ::: NP_009 LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE2 NCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQ : :..::.:::: :.. .. ... :.::: ::.::. ....... :. : :: NP_009 -C-HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQ 190 200 210 220 230 230 240 250 260 270 pF1KE2 CMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS---------EK . ::: . . . :.:.:: : ... . .: ::.::: :. .: :: NP_009 MLAVSATYPEFLANALTKYMRDPTFVRLNS-SDPSLIGLKQYY-KVVNSYPLAHKVFEEK 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE2 NRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFK ...: .:.. . :::...: . .: . ::..: ..::: : .: :..::. . ..: NP_009 TQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLK 300 310 320 330 340 350 340 350 360 370 380 390 pF1KE2 DFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE :. :.:..:.: .::.: :.::.: : :.: : .::.::..::::::: ::..:. NP_009 HFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRG 360 370 380 390 400 410 400 410 420 pF1KE2 NDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR .. ... . .. ..:. ::. : NP_009 EEENMMMRIAQKCNINLLPLPDPIPSGLMEECVDWDVEVKAAVHTYGIASVPNQPLKKQI 420 430 440 450 460 470 >>NP_057439 (OMIM: 615428) probable ATP-dependent RNA he (455 aa) initn: 649 init1: 315 opt: 735 Z-score: 885.3 bits: 173.0 E(86401): 1.4e-42 Smith-Waterman score: 735; 32.3% identity (68.6% similar) in 405 aa overlap (17-418:5-394) 10 20 30 40 50 pF1KE2 MAEQDVENDLLDYDEEEEPQAPQE-STPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI :: ..: : : : ... : :.:. . : .: NP_057 MAAPEEHDSPTEASQPIVEEEETKT---------FKDLGVTDVLCEAC 10 20 30 60 70 80 90 100 110 pF1KE2 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC . :. .:...: : :: :. : :.. :..: :::..:.: :. . . .. .::. NP_057 DQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLT 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE2 HTRELAFQISKEYERFSKYMPSVKVSVFFGGL-SIKKDEEVLKKNCPHVVVGTPGRILAL :::::::::...: ... . .:. .:. ::. :.... . :: ::....::::.. NP_057 PTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK--PHIIIATPGRLIDH 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE2 VRN-RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPV ..: ..:.:. .:..:.:: :..:. .:.. .:..:... :.... ..::::..: .. . NP_057 LENTKGFNLRALKYLVMDEADRILN-MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE2 CRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQ : ...:.. :... . :.. :::::. . .. :. : .:. : :. .:: .. . NP_057 QRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCN 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE2 RCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI . : :: . .: :: .: :.: .::. ..:: : ::.::.. .::.:: .:.. NP_057 NTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDV 280 290 300 310 320 330 360 370 380 390 400 410 pF1KE2 VFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI : :.:.: : :.:::.:..: : .: :::::. . :..... .. . .. .: . NP_057 VVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEHLIGKKLPGFPTQD 340 350 360 370 380 390 420 pF1KE2 DISTYIEQSR : NP_057 DEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRK 400 410 420 430 440 450 427 residues in 1 query sequences 61573307 residues in 86401 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Mar 1 16:48:51 2017 done: Wed Mar 1 16:48:53 2017 Total Scan time: 6.600 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]