GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:58:38

Sequence gi568815593f:159910529_160165062 : 254534 bp : 43.53% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6378   7326  949  2  1   55  111  1389 0.796 131.62
 1.02 Intr +   9194   9309  116  0  2   64  110    10 0.419   0.97
 1.03 Intr +  17766  17907  142  2  1   46   58    73 0.226   0.03
 1.04 Term +  21163  21356  194  2  2   61   46   122 0.682   2.88
 1.05 PlyA +  23291  23296    6                               1.05

 2.04 PlyA -  25619  25614    6                               1.05
 2.03 Term -  40109  39965  145  1  1   53   41   209 0.857  10.08
 2.02 Intr -  40317  40185  133  1  1  -20   55   208 0.820   6.40
 2.01 Init -  40661  40322  340  2  1   97   45   414 0.936  33.42
 2.00 Prom -  41270  41231   40                              -3.96

 3.00 Prom +  49174  49213   40                              -7.26
 3.01 Init +  54231  54385  155  2  2   53   80   175 0.946  12.69
 3.02 Intr +  60164  60252   89  2  2   44   91   -19 0.111  -6.39
 3.03 Term +  61351  61964  614  2  2  108   49  1084 0.556 101.15
 3.04 PlyA +  63342  63347    6                               1.05

 4.00 Prom +  64189  64228   40                              -3.16
 4.01 Init + 100001 100330  330  1  0  102  111   312 0.993  32.21
 4.02 Term + 101488 101526   39  0  0   70   52    40 0.402  -4.21
 4.03 PlyA + 102842 102847    6                               1.05

 5.04 PlyA - 103527 103522    6                               1.05
 5.03 Term - 113450 113170  281  0  2   30   44   287 0.958  14.11
 5.02 Intr - 115172 115107   66  0  0   93   61    41 0.615   0.78
 5.01 Init - 117087 117033   55  0  1   59  115    29 0.788   4.15
 5.00 Prom - 120578 120539   40                              -8.36

 6.00 Prom + 121171 121210   40                              -5.06
 6.01 Init + 121482 121484    3  2  0   62  115     0 0.314   0.10
 6.02 Intr + 123794 123841   48  1  0   90   73    50 0.398   2.58
 6.03 Intr + 124612 124672   61  0  1   61   94    25 0.256  -1.29
 6.04 Intr + 126163 126275  113  2  2  109   91    -8 0.324   1.70
 6.05 Intr + 132605 132641   37  1  1   81   87    57 0.655   2.74
 6.06 Intr + 138986 139134  149  0  2  100   53    47 0.909   2.35
 6.07 Intr + 140601 140655   55  2  1  117   87    53 0.910   6.65
 6.08 Term + 154404 154537  134  1  2   87   42   106 0.724   4.15
 6.09 PlyA + 154995 155000    6                               1.05

 7.03 PlyA - 156066 156061    6                               1.05
 7.02 Term - 161349 161203  147  0  0   81   54   138 0.938   7.60
 7.01 Init - 168764 168708   57  2  0   79   77    11 0.467   0.41
 7.00 Prom - 173627 173588   40                              -2.96

 8.03 PlyA - 173651 173646    6                               1.05
 8.02 Term - 183537 181854 1684  2  1   93   47   627 0.029  47.49
 8.01 Init - 208860 208277  584  0  2   75   81   862 0.818  76.86
 8.00 Prom - 228728 228689   40                              -2.56


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 183470 181854 1617  2  0   93   47   578 0.965  49.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_1|466_aa
MNPDLDTGHNTSAPAHWGELKNANFTGPNQTSSNSTLPQLDITRAISVGLVLGAFILFAI
VGNILVILSVACNRHLRTPTNYFIVNLAMADLLLSFTVLPFSAALEVLGYWVLGRIFCDI
WAAVDVLCCTASILSLCAISIDRYIGVRYSLQYPTLVTRRKAILALLSVWVLSTVISIGP
LLGWKEPAPNDDKECGVTEEPFYALFSSLGSFYIPLAVILVMYCRVYIVAKRTTKNLEAG
VMKEMSNSKELTLRIHSKNFHEDTLSSTKAKGHNPRSSIAVKLFKFSREKKAAKTLGIVV
GMFILCWLPFFIALPLACRGCDQSMLRKEKASAGCRNGSKVQALAFRGRGNSSKQHHESA
QDTVESVHIGRLCSYDSIDSTLLATLTRSSSDHPLNTQVPLSVLEARKSKIKEQEHSVSG
EDLPIDGDFYVSSHGRRGKQALECLFYKYTDPIYQSSALVTYLPFT

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_1|1401_bp
atgaatcccgacctggacaccggccacaacacatcagcacctgcccactggggagagttg
aaaaatgccaacttcactggccccaaccagacctcgagcaactccacactgccccagctg
gacatcaccagggccatctctgtgggcctggtgctgggcgccttcatcctctttgccatc
gtgggcaacatcctagtcatcttgtctgtggcctgcaaccggcacctgcggacgcccacc
aactacttcattgtcaacctggccatggccgacctgctgttgagcttcaccgtcctgccc
ttctcagcggccctagaggtgctcggctactgggtgctggggcggatcttctgtgacatc
tgggcagccgtggatgtcctgtgctgcacagcgtccattctgagcctgtgcgccatctcc
atcgatcgctacatcggggtgcgctactctctgcagtatcccacgctggtcacccggagg
aaggccatcttggcgctgctcagtgtctgggtcttgtccaccgtcatctccatcgggcct
ctccttgggtggaaggagccggcacccaacgatgacaaggagtgcggggtcaccgaagaa
cccttctatgccctcttctcctctctgggctccttctacatccctctggcggtcattcta
gtcatgtactgccgtgtctatatagtggccaagagaaccaccaagaacctagaggcagga
gtcatgaaggagatgtccaactccaaggagctgaccctgaggatccattccaagaacttt
cacgaggacacccttagcagtaccaaggccaagggccacaaccccaggagttccatagct
gtcaaactttttaagttctccagggaaaagaaagcagctaagacgttgggcattgtggtc
ggtatgttcatcttgtgctggctacccttcttcatcgctctaccgcttgcctgcagaggc
tgtgaccagagcatgctcaggaaggagaaggcctcagcaggatgcaggaatggatcaaag
gtgcaggctttggcttttaggggcaggggaaatagctccaaacagcaccatgagtcagct
caggatacagtagaatctgtccacattggcaggctctgctcttacgactctattgacagc
acactcctggccacactcacccgcagctcatctgaccaccctttgaacactcaagtgccc
ctctctgttctggaggctcggaagtccaagatcaaggagcaagaacattcagtgtctggt
gaggacctgcccatagatggtgacttctatgtgtcctcacatggcagaaggggcaaacag
gctctcgaatgcctcttttataagtacactgatcccatttatcaaagttctgccctggtg
acctacttgcctttcacatga

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_2|205_aa
MEKAGADLQGGATRVIISAPSADAPMFVMGMNHKKYDNRLNIVSYASCTTNCLVPLGEVI
HDNFGIVERFQNTVHAITATQKIVDGLSGKLWCDGCGALQNITPASTGTAKAVGVISKLN
KKLTDMGFCVHITNVSVMDLTCRLEKPAKYDDIKKVVKDTHSSTFDAGAGIALKDHFVKL
ISWYDNEFGYSNRVVDLMAHIASKE

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_2|618_bp
atggagaaggctggggctgacttgcagggaggagctacaagggtcatcatctctgccccc
tctgctgatgcccccatgttcgtgatgggcatgaaccacaagaagtatgacaacagactc
aatatcgtcagctatgcctcctgcaccaccaactgcttagtgcccctgggcgaggtcatc
catgacaactttggtattgtggaaagattccagaatacagtccacgccatcactgccacc
cagaagattgtggatggcctctctgggaaactgtggtgcgacggctgcggggctctccag
aacatcacccctgcctctactggcactgccaaggctgtgggggtcatctctaagctgaac
aagaagctcactgacatgggcttctgtgtccacatcaccaacgtgtcagtcatggacctc
acctgccgtctcgaaaaacctgccaaatatgatgacattaagaaggtggtgaaagacacc
cactcctccacctttgatgctggggccggcattgccctcaaagaccattttgtcaagctc
atttcctggtatgacaacgaatttggctacagcaacagggtggtggacctcatggcccac
atagcctccaaggagtaa

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_3|285_aa
MPTQHIDLILFTTFFILVAVVLVVTAVLAVVTVAALKAVIIAILIECFQCASHEQSSSCP
HTPHPCVNLELCSFLIFASLSGSLFSTLKPPDAVFKVVFWLGYFNSCLNPIIYPCSSKEF
KRAFVRILGCQCRGRGRRRRRRRRRLGGCAYTYRPWTRGGSLERSQSRKDSLDDSGSCLS
GSQRTLPSASPSPGYLGRGAPPPVELCAFPEWKAPGALLSLPAPEPPGRRGRHDSGPLFT
FKLLTEPESPGTDGGASNGGCEAAADVANGQPGFKSNMPLAPGQF

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_3|858_bp
atgcccacacagcacatagacctcatcctcttcaccaccttcttcatcttggtagcagtg
gtactggtggtaacagcggtgctggcagttgtaacagtagcagcgctcaaagcagtcatc
atagctatacttattgagtgctttcaatgtgccagccatgaacaaagctcctcgtgtccc
cacaccccacacccctgtgtgaacttggaactatgcagcttcctaatttttgccagccta
tcaggctccttgttctccaccctgaagccccccgacgccgtgttcaaggtggtgttctgg
ctgggctacttcaacagctgcctcaaccccatcatctacccatgctccagcaaggagttc
aagcgcgctttcgtgcgcatcctcgggtgccagtgccgcggccgcggccgccgccgacgc
cgccgccgccgtcgcctgggcggctgcgcctacacctaccggccgtggacgcgcggcggc
tcgctggagcgctcgcagtcgcgcaaggactcgctggacgacagcggcagctgcctgagc
ggcagccagcggaccctgccctcggcctcgccgagcccgggctacctgggccgcggcgcg
ccaccgccagtcgagctgtgcgccttccccgagtggaaggcgcccggcgccctcctgagc
ctgcccgcgcctgagccccccggccgccgcggccgccacgactcgggcccgctcttcacc
ttcaagctcctgaccgagcccgagagccccgggaccgacggcggcgccagcaacggaggc
tgcgaggccgcggccgacgtggccaacgggcagccgggcttcaaaagcaacatgcccctg
gcgcccgggcagttttag

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_4|122_aa
MGEKSENCGVPEDLLNGLKVTDTQEAECAGPPVPDPKNQHSQSKLLRDDEAHLQEDQGEE
ECFHDCSASFEEEPGADKVENKSNEDVNSSELDEEYLIELEKNMSDEEKQCAPPEQEEKG
QK

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_4|369_bp
atgggggagaagtcagagaactgtggggttccagaggatctgttaaatggtttgaaggtt
acagatactcaggaagccgagtgtgctggccctccagttcctgatcccaaaaatcagcat
tcccagagtaagctgctcagggatgatgaggcccatctccaggaggaccagggagaagag
gagtgttttcatgactgcagtgcctcatttgaggaggagccaggagcggacaaggttgag
aacaaatctaatgaagatgtgaattcctctgaactagatgaagaatacctaatagaactg
gaaaaaaacatgtcggatgaagagaaacagtgtgcaccaccagaacaggaggaaaaaggg
caaaagtga

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_5|133_aa
MTVDGHSKPQEEMKNIRNGVEIKNCLQEVELSNAQKLLQKGGTKYSLIPDEEEEKEEAKS
AEFEKPDPTRNPSRKRKEEKKKNWKSSDSDSSDSENDTGKRARHTSKDSKAAKKKKKKKH
KKKHIGVERLGNM

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_5|402_bp
atgacagtagatggtcactcaaaaccacaggaggaaatgaagaacatcagaaacggtgtg
gaaataaagaattgtttgcaggaagtagaactgagtaatgcacagaagctgctgcaaaaa
ggtgggaccaaatactctctgatacctgatgaggaagaggaaaaggaagaggcaaagtca
gcagagtttgagaagcctgaccccacaaggaatccttctagaaaaagaaaggaggagaag
aaaaagaattggaagtcatctgactctgacagctcagactctgagaatgatacaggcaag
agggcaaggcacacatcaaaagacagcaaggcagcaaagaagaagaaaaagaagaagcac
aagaagaagcacataggagtggaaagattaggcaacatgtga

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_6|199_aa
MDNILSAFVFDEFLAIYKRREESTRLKEEGNEQFKKGDYIEAESSYSRALEMCPSCFQKE
RSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYK
SILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQ
DSSTGSYSINFVQNPNNNR

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_6|600_bp
atggataacattctctcagcctttgtgtttgatgagtttttggccatctataaaagaaga
gaagagagcactagactaaaggaggagggaaatgaacagtttaagaaaggagattatata
gaagctgaaagttcttatagtcgagccctcgaaatgtgcccatcctgcttccaaaaggag
aggtcgattctattttcaaatagagctgcagcaaggatgaaacaggacaagaaagaaatg
gccatcaatgactgcagcaaagcaattcaattaaaccccagctatatcagggcaatattg
aggagagcagagttgtatgagaagacggacaagctagatgaagccctggaagactataaa
tctatattagaaaaagatccatcaatacatcaagcaagagaagcttgtatgagattacct
aagcaaattgaagaacgtaatgaaagactaaaagaagagatgttaggtaaattaaaagat
cttgggaacttggttctccgaccttttgggctctccacggaaaatttccagatcaaacag
gattcctctaccggctcgtactccatcaatttcgttcaaaatccaaataataacagataa

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_7|67_aa
MGTPEGNTKSSQFCQIMGKGRDEHMEETGTVMKGSDHRKQQEGTYNPAGSDHQLQAHKAA
SEWGLRS

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_7|204_bp
atgggaacaccggaaggcaacacaaaatcaagtcagttctgtcaaatcatggggaagggg
agggacgagcatatggaggaaaccggcacagtaatgaagggaagtgatcacagaaaacaa
caggaaggaacatacaatccagctggcagcgaccatcagctgcaggctcataaggctgca
tctgaatgggggctgcgcagctga

>gi568815593f:159910529_160165062|GENSCAN_predicted_peptide_8|755_aa
MAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGETDGQQSA
PQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELPPSPASP
PEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDALVVSFRF
GEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCEANGAVP
DDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRK
MYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRRNESVTT
VNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLSTKKVLQS
KNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRVRLKPQR
YRNEENDSSLKTGLEKMRSGKMAPKPQSRCTSTRSAGEAPSENQSPSKGPEEASSEVQDT
NEVHVPGDQDEPQTLGKKGSKNNISVYMTLNQKKSDSSSASVCSIDSTDDLKSSNSECSS
SESFDFPPGSMHAPSTSSTSSSSKEEKKLSNSLKMKVFSKNVSKCVTPDGRTICVGDIVW
AKIYGFPWWPARILTITVSRKDNGLLVRQEARISWFGSPTTSFLALSQLSPFLENFQSRF
NKKRKGLYRKAITEAAKAAKQLTPEVRALLTQFET

>gi568815593f:159910529_160165062|GENSCAN_predicted_CDS_8|2268_bp
atggcggccgtggctgcagaggcggcagcgactgcagcgtcccccggggaggggggcgcc
ggcgaggccgagccggagatggagcccatccccggcagtgaggccggcactgaccccctc
ccggtcacggccactgaagcgtctgtgccggatggcgagactgacgggcagcaatccgct
cctcaggccgacgagccgccgctcccgccgccaccgccgccgccgggggagctcgcccgc
agcccagaggcggtggggccggagctggaggctgaggagaaactgtccgttcgggtggcg
gagtcggcggcagccgcgcctcagggagggccggaacttccaccttctcctgcatcgccg
ccggagcagcccccggctcccgaggagcgcgaggagccgccgctgcctcagcccgtagcc
ccggcgctcgtgccgccggcgggcggggactccacggtgtcgcaactgatcccgggctcg
gaggtgcgggtcacgctggaccacatcattgaggacgcgcttgtcgtgtcgttccgcttc
ggggagaagctcttctccggggtcctcatggatctgtccaaaaggtttgggccccatggt
atccctgtgacagtatttcccaaaagggaatataaggataaaccagaagccatgccgctc
caaagtaatacattccaagaagggacagaagtcaagtgtgaagcaaatggtgctgttccc
gatgacccttctcctgtcccgcatcccgagctgagcttggctgaaagcctgtggacttcc
aaaccaccacctctcttccatgaaggagcaccttatcctccccctttgtttatcagggac
acatataaccaatcaatacctcagccacctcctcggaaaattaagcgacccaaacgaaaa
atgtacagggaagaacccacttcaataatgaatgctattaaactacgacccaggcaagtt
ctgtgtgataaatgtaaaaacagtgttgttgctgaaaaaaaggaaattagaaaaggtagt
agtgcaactgactcttctaaatatgaagataaaaaacggagaaatgaaagtgtaactact
gtgaacaaaaaactgaaaactgaccataaagtggatgggaaaaaccaaaatgaaagccag
aaaagaaatgctgtggttaaggtttcaaatattgctcacagcagaggcagagtagtaaaa
gtttctgctcaggcaaatacatcaaaagctcagttaagtactaaaaaagttctccagagt
aagaacatggatcatgcgaaagctcgggaagtgttaaaaattgccaaagaaaaggcacaa
aagaagcaaaatgaaacctctacttccaaaaatgcacattcaaaagtccatttcacacgt
cgatatcagaatcctagctcaggttcccttccaccccgggttcgtttaaaaccacagagg
tacaggaatgaagaaaatgactcttctctgaagacaggacttgagaaaatgcggagtggc
aagatggcacccaagccccagtctcgctgcacctctacccgctcagcaggtgaggcccct
tcagaaaatcagagtccctcaaaaggccctgaagaggccagcagtgaggttcaggacaca
aatgaagtgcatgtgcctggtgatcaggatgaaccacagacattgggcaaaaagggcagc
aaaaacaatatctctgtttatatgaccctaaatcaaaagaaatctgactcttccagtgct
tcagtgtgtagcattgatagcacagatgatttgaaatcttccaactctgagtgtagttct
tctgaaagctttgattttcctccaggcagtatgcatgcaccttccacctcctccacttcc
tcctcttcaaaggaagagaaaaagctcagtaattccttgaaaatgaaagtcttttccaaa
aacgtctctaaatgcgtcacaccagatggcaggaccatatgtgtaggggacattgtttgg
gccaagatatatggcttcccttggtggccagcccgtattcttactataactgtgagccgg
aaagataacggccttttagtccgacaggaggcccgtatttcatggtttgggtctccaaca
acatctttccttgctctttcacaactctccccctttttagaaaacttccagtcacgcttt
aataagaagagaaagggcctgtatcgcaaggctatcacagaggcagctaaggctgccaag
cagctgacccccgaagtgcgggctttgttgacacagtttgaaacgtga