GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:02:55

Sequence gi568815575r:111146580_111363936 : 217357 bp : 38.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1158   1311  154  2  1  110   94   112 0.922  12.72
 1.02 Intr +   5831   5868   38  0  2  105  123    -2 0.802   2.06
 1.03 Intr +  16336  16467  132  0  0   54   89   224 0.997  19.02
 1.04 Intr +  16983  17148  166  2  1   64   78   182 0.794  13.41
 1.05 Intr +  26439  26502   64  1  1   89  110    36 0.658   2.76
 1.06 Intr +  35182  35294  113  1  2   90   70    60 0.457   3.50
 1.07 Intr +  35589  35644   56  1  2  121   64    21 0.267   0.78
 1.08 Intr +  45927  46039  113  2  2   75   97    58 0.856   3.66
 1.09 Intr +  47722  47839  118  1  1   86   99   152 0.989  15.65
 1.10 Intr +  49888  50061  174  0  0   71  110   123 0.707  12.01
 1.11 Intr +  69842  69979  138  1  0   70   67   157 0.809  11.54
 1.12 Term +  73779  73868   90  2  0  113   47    34 0.610  -1.46
 1.13 PlyA +  73915  73920    6                               1.05

 2.04 PlyA -  74041  74036    6                               1.05
 2.03 Term -  76663  76533  131  2  2   97   42    60 0.268  -0.34
 2.02 Intr -  84759  84655  105  1  0   51  106    38 0.065   1.17
 2.01 Init -  96823  96601  223  1  1   66   39   174 0.172   9.06
 2.00 Prom -  97067  97028   40                              -6.65

 3.13 PlyA -  97344  97339    6                               1.05
 3.12 Term - 100180  99998  183  1  0  144   35   216 0.989  18.46
 3.11 Intr - 100925 100789  137  0  2   68  110   102 0.998   9.77
 3.10 Intr - 101413 101292  122  0  2   91   69   163 0.999  13.92
 3.09 Intr - 102192 101990  203  0  2   97   31   144 0.976   6.76
 3.08 Intr - 102478 102356  123  1  0  101   93   148 0.999  16.46
 3.07 Intr - 104524 104338  187  0  1   95   36   238 0.999  18.07
 3.06 Intr - 104707 104630   78  0  0   81   73   123 0.996   7.85
 3.05 Intr - 105163 104970  194  1  2   86   82   247 0.983  21.27
 3.04 Intr - 105920 105728  193  1  1   56   68   219 0.635  15.27
 3.03 Intr - 106637 106429  209  2  2   91   78   111 0.999   7.35
 3.02 Intr - 107824 107693  132  1  0   83   62    80 0.965   4.82
 3.01 Init - 117357 117193  165  0  0   61   93   135 0.973  10.98
 3.00 Prom - 121595 121556   40                              -5.35

 4.04 PlyA - 121896 121891    6                               1.05
 4.03 Term - 123861 123699  163  2  1   13   33   272 0.440  10.63
 4.02 Intr - 124374 124202  173  0  2   70   69    78 0.287   1.92
 4.01 Init - 126512 126426   87  2  0   70   86    53 0.605   3.99
 4.00 Prom - 136807 136768   40                              -3.75

 5.08 PlyA - 137077 137072    6                               1.05
 5.07 Term - 150782 150647  136  1  1   58   47   119 0.036   1.31
 5.06 Intr - 155164 155051  114  0  0  111   42    68 0.028   3.14
 5.05 Intr - 165840 165696  145  1  1   77   26    62 0.001  -2.68
 5.04 Intr - 184462 184325  138  2  0   95  113   181 0.956  20.81
 5.03 Intr - 186574 186472  103  1  1   97  103   129 0.999  14.13
 5.02 Intr - 193873 193728  146  2  2   74   53   103 0.005   4.48
 5.01 Init - 205887 205749  139  0  1   62   34   111 0.606   3.45
 5.00 Prom - 208480 208441   40                              -3.25


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:111146580_111363936|GENSCAN_predicted_peptide_1|451_aa
GIPEQWARLLQTSNITKLEQKKNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIA
AHPSSTKTASEPPLAPPVSEEEDEEEEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIAS
PAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDEEILEKLRSIVSVGDPKKKYTRFE
KIGQGKLWARVVSSVLIEVILWVGPPTPKVFASSSDLFWATQGLLNPMAHTVKQLLRFNV
GVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD
VVTETCMDEGQIAAVCREITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI
EMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKEL
LQHPFLKLAKPLSSLTPLIIAAKEAIKNSSR

>gi568815575r:111146580_111363936|GENSCAN_predicted_CDS_1|1356_bp
ggaattccagagcaatgggcacgattactccaaacttccaacataacaaaattggaacag
aagaagaacccacaagctgttctagatgttctcaaattctatgattccaaagaaacagtc
aacaaccagaaatacatgagctttacatcaggagataaaagtgcacatggatacatagca
gcccatccttcgagtacaaaaacagcatctgagcctccattggcccctcctgtgtctgaa
gaagaagatgaagaggaagaagaagaagaagatgaaaatgagccaccaccagttatcgca
ccaagaccagagcatacaaaatcaatctatactcgttctgtggttgaatccattgcttca
ccagcagtaccaaataaagaggtcacaccaccctctgctgaaaatgccaattccagtact
ttgtacaggaacacagatcggcaaagaaaaaaatccaagatgacagatgaggagatctta
gagaagctaagaagcattgtgagtgttggggacccaaagaaaaaatacacaagatttgaa
aaaattggtcaagggaaactatgggcaagagtggtgtctagtgtgcttatagaagtgatt
ctttgggtaggaccacccaccccaaaagtatttgcttcttcatcggatctattttgggcc
acacaaggcctcttgaatccaatggcacacactgtgaaacagctgcttagatttaatgtt
ggagtggccataaagcagatgaaccttcaacagcaacccaagaaggaattaattattaat
gaaattctggtcatgagggaaaataagaaccctaatattgttaattatttagatagctac
ttggtgggtgatgaactatgggtagtcatggaatacttggctggtggctctctgactgat
gtggtcacagagacctgtatggatgaaggacagatagcagctgtctgcagagagatcact
cctgagcaaagtaaacgaagcactatggtgggaaccccatattggatggcacctgaggtg
gtgactcgaaaagcttatggtccgaaagttgatatctggtctcttggaattatggcaatt
gaaatggtggaaggtgaacccccttaccttaatgaaaatccactcagggcattgtatctg
atagccactaatggaactccagagctccagaatcctgagagactgtcagctgtattccgt
gactttttaaatcgctgtcttgagatggatgtggataggcgaggatctgccaaggagctt
ttgcagcatccatttttaaaattagccaagcctctctccagcctgactcctctgattatc
gctgcaaaggaagcaattaagaacagcagccgctaa

>gi568815575r:111146580_111363936|GENSCAN_predicted_peptide_2|152_aa
MKTLEENLGNTIQGIGMGKDFMTKTPKAMATKAKIDKRDLIKLNSVFTAKETIISMNRQP
TELEKFFAIYLSDKGRKMSHPITVGHSVYSSQQEIKEKSPGHHPYVCQQRHFGINIERCA
LVISGHTSNIKDLDRLTCVKMSLKIQGKRINC

>gi568815575r:111146580_111363936|GENSCAN_predicted_CDS_2|459_bp
atgaaaaccctagaagaaaacctaggcaataccattcagggcataggcatgggcaaagat
ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaacgggatcta
attaaactaaacagcgtcttcacagcaaaagaaactatcatcagcatgaacaggcaacct
acagaattggagaaattttttgcaatctatctatctgacaaaggaagaaaaatgagtcac
cctatcacagtgggccacagtgtatactctagtcaacaggaaattaaagaaaagtcacca
ggccaccatccatatgtttgccagcaaagacattttggaatcaacattgaaagatgtgcc
ctcgttatctcagggcacactagcaacatcaaagatttggatagactcacctgtgtcaag
atgagcttaaaaatccagggaaagagaataaactgttaa

>gi568815575r:111146580_111363936|GENSCAN_predicted_peptide_3|641_aa
MGPPLKLFKNQKYQELKQECIKDSRLFCDPTFLPENDSLFYNRLLPGKVVWKRPQDICDD
PHLIVGNISNHQLTQGRLGHKPMVSAFSCLAVQESHWTKTIPNHKEQEWDPQKTEKYAGI
FHFRFWHFGEWTEVVIDDLLPTINGDLVFSFSTSMNEFWNALLEKAYAKLLGCYEALDGL
TITDIIVDFTGTLAETVDMQKGRYTELVEEKYKLFGELYKTFTKGGLICCSIESPNQEEQ
EVETDWGLLKGHTYTMTDIRKIRLGERLVEVFSAEKVYMVRLRNPLGRQEWSGPWSEISE
EWQQLTASDRKNLGLVMSDDGEFWMSLEDFCRNFHKLNVCRNVNNPIFGRKELESVLGCW
TVDDDPLMNRSGGCYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDLRTYRRMGRPDNYI
IGFELFKVEMNRKFRLHHLYIQERAGTSTYIDTRTVFLSKYLKKGNYVLVPTMFQHGRTS
EFLLRIFSEVPVQLRELTLDMPKMSCWNLARGYPKVVTQITVHSAEDLEKKYANETVNPY
LVIKCGKEEVRSPVQKNTVHAIFDTQAIFYRRTTDIPIIVQVWNSRKFCDQFLGQVTLDA
DPSDCRDLKSLYLRKKGGPTAKVKQGHISFKVISSDDLTEL

>gi568815575r:111146580_111363936|GENSCAN_predicted_CDS_3|1926_bp
atgggtcctcctctgaagctcttcaaaaaccagaaataccaggaactgaagcaggaatgc
atcaaagacagcagacttttctgtgatccaacatttctgcctgagaatgattctcttttc
tacaaccgactgcttcctggaaaggtggtgtggaaacgtccccaggacatctgtgatgac
ccccatctgattgtgggcaacattagcaaccaccagctgacccaagggagactggggcac
aagccaatggtttctgcattttcctgtttggctgttcaggagtctcattggacaaagaca
attcccaaccataaggaacaggaatgggaccctcaaaaaacagaaaaatacgctgggata
tttcactttcgtttctggcattttggagaatggactgaagtggtgattgatgacttgttg
cccaccattaacggagatctggtcttctctttctccacttccatgaatgagttttggaat
gctctgctggaaaaagcttatgcaaagctgctaggctgttatgaggccctggatggtttg
accatcactgatattattgtggacttcacgggcacattggctgaaactgttgacatgcag
aaaggaagatacactgagcttgttgaggagaagtacaagctattcggagaactgtacaaa
acatttaccaaaggtggtctgatctgctgttccattgagtctcccaatcaggaggagcaa
gaagttgaaactgattggggtctgctgaagggccatacctataccatgactgatattcgc
aaaattcgtcttggagagagacttgtggaagtcttcagtgctgagaaggtgtatatggtt
cgcctgagaaaccccttgggaagacaggaatggagtggcccctggagtgaaatttctgaa
gagtggcagcaactgactgcatcagatcgcaagaacctggggcttgttatgtctgatgat
ggagagttttggatgagcttggaggacttttgccgcaactttcacaaactgaatgtctgc
cgcaatgtgaacaaccctatttttggccgaaaggagctggaatcggtgttgggatgctgg
actgtggatgatgatcccctgatgaaccgctcaggaggctgctataacaaccgtgatacc
ttcctgcagaatccccagtacatcttcactgtgcctgaggatgggcacaaggtcattatg
tcactgcagcagaaggacctgcgcacttaccgccgaatgggaagacctgacaattacatc
attggctttgagctcttcaaggtggagatgaaccgcaaattccgcctccaccacctctac
atccaggagcgtgctgggacttccacctatattgacacccgcacagtgtttctgagcaag
tacctgaagaagggcaactatgtgcttgtcccaaccatgttccagcatggtcgcaccagc
gagtttctcctgagaatcttctctgaagtgcctgtccagctcagggaactgactctggac
atgcccaaaatgtcctgctggaacctggctcgtggctacccgaaagtagttactcagatc
actgttcacagtgctgaggacctggagaagaagtatgccaatgaaactgtaaacccatat
ttggtcatcaaatgtggaaaggaggaagtccgttctcctgtccagaagaatacagttcat
gccatttttgacacccaggccattttctacagaaggaccactgacattcctattatagta
caggtctggaacagccgaaaattctgtgatcagttcttggggcaggttactctggatgct
gaccccagcgactgccgtgatctgaagtctctgtacctgcgtaagaagggtggtccaact
gccaaagtcaagcaaggccacatcagcttcaaggttatttccagcgatgatctcactgag
ctctaa

>gi568815575r:111146580_111363936|GENSCAN_predicted_peptide_4|140_aa
MAFILGKSVECTVRQIVCEALERERKSLGSLPEVLITITDLPTRAMSDQGHVCSLAHINF
ANTSPFFSACPLSSNVHVCDINPGTENSSGNGSSSSSSSSSSSRAPGITQVSREGIRKLT
LEFYFLDNLASKKDEETSTL

>gi568815575r:111146580_111363936|GENSCAN_predicted_CDS_4|423_bp
atggcatttatccttggcaaaagtgtagaatgcactgttaggcagatcgtttgtgaggct
ttagaaagggagcggaaatcactagggtcacttcctgaagtcctcatcactatcacagat
ctgcctaccagggccatgtctgaccagggccatgtctgcagcctagcccatattaacttt
gccaacacttcaccatttttctctgcatgtcctctctctagtaatgtgcatgtctgtgat
attaaccctgggacagaaaacagcagcggcaacggcagcagcagcagcagcagcagcagc
agcagcagcagggctcctgggataactcaggtgagtagagagggaattcgcaaacttacc
ctggagttttatttcctggataacttagcgtctaagaaagatgaagaaacttcaactttg
tag

>gi568815575r:111146580_111363936|GENSCAN_predicted_peptide_5|306_aa
MNNSNSSNTLGNEINSALAQKPAEMELVLGVVSLGFIGGSNKAIVRELPGRKAKSAGLQR
LQTPLLLQVQAHGDQSSAPEPLTRVNKVPAGNPHPVTCLHDFFGDDDVFIACGPEKFRYA
QDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDALLPK
GFQKVSKANEVTKPCFGTWVEHLSPQFRDIAKGVFRALYVTRHQTCTCLCPWMTRTRLVI
PCKGGESAQSPEYKSKPIIVVGTREQDAYIPKMSSRTLMGMIPKITPPQKRLCQETSPDR
NTGTVV

>gi568815575r:111146580_111363936|GENSCAN_predicted_CDS_5|921_bp
atgaacaatagtaacagcagcaacaccctgggaaatgagataaattctgccttagcccag
aagcctgctgagatggagctggttcttggagtggtcagcctgggattcataggtggaagc
aataaagccatcgtcagagaactaccaggaagaaaggctaagtctgctggtctacagaga
ctgcagacccccttactcctacaggttcaggcccacggagatcagagttctgcccctgag
cctctgactagagttaataaagttcctgcagggaatccccacccagtaacttgtctccat
gatttctttggtgatgatgatgtgtttattgcctgtggtcctgaaaaatttcgctatgct
caggatgatttttctctggatgaaaatgaatgccgagtcatgaagggaaacccatcagcc
acagctggcccaaaggcatccccaacacctcagaagacttcagccaagagccctggtcct
atgcgccgaagcaagtctccagctgactcaggtaacgaccaagacgcacttcttccaaag
ggtttccaaaaggtctccaaagctaatgaggtaaccaaaccatgctttgggacatgggtt
gaacacttgtctccccagttcagagacatagcaaagggggtgttcagggcactttatgtc
accaggcaccagacctgtacctgcctctgtccttggatgactcggactcgcttggtgatt
ccatgtaaaggaggggagagtgctcagagtccagagtacaaatccaagcctatcattgta
gtagggacaagagaacaggatgcctatatccccaaaatgagctccaggacactgatggga
atgatcccaaagatcaccccacctcagaaacgtctgtgccaagagacttccccagataga
aacactgggacagtggtttga