GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:44:02

Sequence gi568815581f:57005465_57220321 : 214857 bp : 45.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3251   3315   65  1  2   37   46   128 0.439   4.12
 1.02 Intr +   6219   6285   67  0  1   66  109    25 0.201   1.31
 1.03 Intr +  35247  35345   99  2  0   85   60    34 0.020   0.61
 1.04 Intr +  40233  40413  181  2  1   19   -7   295 0.098  12.54
 1.05 Term +  40596  40981  386  1  2  -49   52   658 0.922  43.55
 1.06 PlyA +  41310  41315    6                               1.05

 2.10 PlyA -  42810  42805    6                               1.05
 2.09 Term -  58417  58269  149  2  2   61   40    97 0.208   0.26
 2.08 Intr -  73946  73823  124  2  1   86   62    -7 0.043  -3.34
 2.07 Intr -  79554  79376  179  1  2  -13   93   140 0.549   4.04
 2.06 Intr -  80008  79807  202  1  1   49   11   166 0.589   3.86
 2.05 Intr -  80656  80468  189  1  0   61   76   134 0.949   9.28
 2.04 Intr -  89022  88728  295  2  1   11   84   141 0.507   3.01
 2.03 Intr -  90937  90792  146  1  2   47   82   123 0.638   6.68
 2.02 Intr -  92638  92512  127  0  1   89   47   100 0.898   6.68
 2.01 Init -  96485  96451   35  2  2  101   87    -4 0.800   0.14
 2.00 Prom -  97789  97750   40                              -8.36

 3.00 Prom +  98894  98933   40                              -8.76
 3.01 Init + 100001 101714 1714  1  1   74   75  1183 0.996 104.73
 3.02 Intr + 104561 104694  134  0  2  124   97   117 0.984  16.56
 3.03 Intr + 106334 106460  127  1  1   54   86    85 0.989   5.15
 3.04 Intr + 107027 107154  128  0  2   75   80   122 0.952  10.50
 3.05 Intr + 108995 109172  178  1  1  115   80   249 0.999  26.29
 3.06 Intr + 110647 110797  151  2  1   94   99   313 0.999  32.22
 3.07 Intr + 111396 111463   68  0  2  120   92    37 0.923   5.85
 3.08 Intr + 112917 112990   74  1  2   67   89    67 0.956   3.83
 3.09 Intr + 113518 113580   63  0  0  109  100    15 0.908   3.71
 3.10 Intr + 120212 120425  214  1  1   60   81    72 0.205   1.99
 3.11 Term + 122399 122511  113  0  2   16   48    94 0.224  -3.08
 3.12 PlyA + 122965 122970    6                               1.05

 4.03 PlyA - 123135 123130    6                               1.05
 4.02 Term - 127172 125912 1261  1  1  106   37   425 0.335  30.26
 4.01 Init - 128186 128170   17  2  2   45  100     9 0.308  -2.44
 4.00 Prom - 143033 142994   40                              -1.06

 5.03 PlyA - 143286 143281    6                               1.05
 5.02 Term - 144096 144079   18  0  0  127   44    21 0.109  -0.08
 5.01 Init - 157757 157701   57  2  0   64   91    87 0.623   7.91
 5.00 Prom - 163382 163343   40                              -3.96

 6.00 Prom + 166902 166941   40                              -7.66
 6.01 Init + 171423 171488   66  2  0   52   94    62 0.127   4.27
 6.02 Intr + 182450 182563  114  1  0   68    7   100 0.036   0.54
 6.03 Intr + 189144 189351  208  2  1  105   71    93 0.672   7.95
 6.04 Intr + 198882 199026  145  1  1   -7   90   106 0.067   0.64
 6.05 Term + 206648 206759  112  2  1   62   49    37 0.002  -4.77
 6.06 PlyA + 208628 208633    6                               1.05

 7.02 PlyA - 208807 208802    6                               1.05
 7.01 Sngl - 209551 209162  390  1  0   85   42   181 0.430   9.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_1|265_aa
MHHLNVDRYGTTATLQDSPERCSAELSCSPFPRILLEHVCFPGQHSQPSMVFVLFSRNSL
IAGLSLVHRCGPGIWHVSRPPLENADQHLFTLPQGYGQFAFGIFDDSFEIPTFSPGAQAD
GSKDPERPWETEHQSRPLANGLDAFAQLLNQFENTGPPPADEEKIQYLPTVPVTEEHVGS
GLECPVCKDDYALGEQLPRNHLFHDGCIVHRLEQHDSCPVCRKSLPGHNTATNTPAPGPT
GMNCSSSSSSPSSSSPSKENATSNS

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_1|798_bp
atgcatcacctgaatgtggaccgctatggcaccacggccacactccaggacagccctgaa
agatgctcagctgagctcagctgctcccccttcccccggatcctcctagagcatgtctgc
ttcccgggccagcacagccagccaagtatggtgtttgtcctgttttctagaaactccttg
atagcaggcttaagtctggttcatcgatgtggccctggcatctggcacgtaagccggccg
ccgttggagaacgcggaccagcacctgttcacgctgccgcagggctacggacagtttgct
ttcggcatctttgacgacagcttcgagatccccacgttctctcctggggcgcaggctgac
ggcagcaaggaccctgagagaccgtgggagacagagcatcagtcccggcccctggccaac
ggcctggacgccttcgcacagctcctcaatcagtttgaaaacacgggccccccaccggca
gatgaagagaaaatccagtacctccccaccgtccccgtcaccgaggagcacgtaggctcc
gggctcgagtgccccgtgtgcaaggacgactacgcgctgggcgagcagctgccccgcaac
cacctgttccacgatggctgcatagtgcaccggctggagcagcacgacagctgccccgtc
tgccgaaaaagcctcccgggacacaacacggccacgaacacccccgccccgggcccgact
gggatgaactgctcctcctcgtcgtcctccccctcctccagctcgcccagtaaagagaac
gccacaagtaactcctga

>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_2|481_aa
MEKITWIRKTKREVPAASQNSPQKSNGLTLNSADKPGNCRLQPSAKQENKSLAMSSCQEL
GTLSQPNSQKEGQKLNPVVSEYLLGKAFYGQNENPESTTRCSRPSCLLTSATQLKAQSMP
SKVPVPAWIGWLLVGHKPRTPSQQATERWAPPRQGNQPRKEGHWIQKRDKRRGEGIPRLK
GKQSQGKGMRPGETWNRCEYLGLRMQIPPETPLSLRPPDPNSVRTVPQPETRLDHNRPMS
RPIFPVPLARRTELPGAAPAGEPRAPHRPDPAAFGSPAGGPRRSCPRPTSSSATIGVRDA
ESARRRRPPAVPRGPARSAALPQLPHVLAQAESRHLSGARERGRAGRYSNRRNLDSLPRK
PSTGFAALSRRVNQAISCLGTESALEKAEGPTLVTQERWQDFHPSHLTWNPWINQLPLEA
NPETKGAVYTETVAEVTLKPYWIVPDLLLPAHMPLVPVKYSRTLPEENPALNYPEPVWFG
L

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_2|1446_bp
atggaaaaaatcacctggatacgtaaaacaaaaagggaggtacctgcagcttctcagaac
agccctcagaaaagtaatggcctcactctcaactcagctgacaaacctggtaactgcagg
ctacagccttctgctaaacaagaaaacaaatccctggcaatgagcagctgtcaggaactc
gggacactttcccagcccaattcacagaaggaaggccagaagcttaacccagtagtgtct
gagtacctgcttggcaaagccttctacggccaaaatgaaaaccctgaatccactaccagg
tgctctaggcctagttgtctgctgacttcagccacccaactgaaggcccaatccatgcct
tcaaaggtgcctgtccctgcatggatcggctggcttcttgtgggccacaaaccacgcaca
ccttctcagcaagctactgaacgatgggctcccccaagacaaggaaatcaaccaagaaag
gaggggcactggatccagaaacgagacaagagaaggggagagggaattccaaggctgaag
gggaagcagagccagggaaaagggatgcgcccaggagaaacgtggaaccgttgcgagtac
ctggggctacgaatgcaaattccccccgagacgcccctgagcctccgacctccagacccc
aattcggttcgaacggtccctcagcccgaaacacggttggatcacaaccggccgatgtcc
cggcccatcttcccagttcccctggctcgccgcacggaactcccaggggctgcgccggcg
ggcgagccgagggctccccatcgccccgaccccgccgccttcgggtctccggcagggggt
ccccggcgcagctgcccccgacctaccagctcctcggctaccatcggggtgcgggatgcg
gagtccgcgcgccgccgccggcccccggctgtgccccgcggcccggcccgcagcgccgcg
cttccgcagctcccccacgtgctagcccaggcggagagccgtcatctctccggtgcccgg
gagaggggccgggcgggacggtacagcaaccggaggaaccttgattccctgccccgcaag
cccagcaccggttttgccgccttgtctcgaagggtcaaccaggccatctcctgcctcggg
acggagagcgccctggaaaaggcggaggggccgaccttagtcacacaagagcgatggcaa
gattttcacccaagccatctgacttggaacccatggattaaccaactgccactggaggca
aatccagagaccaagggagcagtttatacagaaacagttgcagaagtcactctaaaaccc
tactggattgtcccagaccttctgctcccagctcatatgcctttggttcctgtcaagtat
tccaggacactgccagaagagaaccctgccctgaactaccctgaacctgtctggtttggg
ctctga

>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_3|987_aa
MAIQFRSLFPLALPGMLALLGWWWFFSRKKGHVSSHDEQQVEAGAVQLRADPAIKEPLPV
EDVCPKVVSTPPSVTEPPEKELSTVSKLPAEPPALLQTHPPCRRSESSGILPNTTDMRLR
PGTRRDDSTKLELALTGGEAKSIPLECPLSSPKGVLFSSKSAEVCKQDSPFSRVPRKVQP
GYPVVPAEKRSSGERARETGGAEGTGDAVLGEKVLEEALLSREHVLELENSKGPSLASLE
GEEDKGKSSSSQVVGPVQEEEYVAEKLPSRFIESAHTELAKDDAAPAPPVADAKAQDRGV
EGELGNEESLDRNEEGLDRNEEGLDRNEESLDRNEEGLDRNEEIKRAAFQIISQVISEAT
EQVLATTVGKVAGRVCQASQLQGQKEESCVPVHQKTVLGPDTAEPATAEAAVAPPDAGLP
LPGLPAEGSPPPKTYVSCLKSLLSSPTKDSKPNISAHHISLASCLALTTPSEELPDRAGI
LVEDATCVTCMSDSSQSVPLVASPGHCSDSFSTSGLEDSCTETSSSPRDKAITPPLPEST
VPFSNGVLKGELSDLGAEDGWTMDAEADHSGGSDRNSMDSVDSCCSLKKTESFQNAQAGS
NPKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYISTLPYTQSVQICHIEGS
QHHVDKALNLIGKKFKELNLTNIYAPPLPSLALPSLPMTSWLMLPDGITVEVIVVNQVNA
GHLFVQQHTHPTFHALRSLDQQMYLCYSQPGIPTLPTPVEITVICAAPGADGAWWRAQVV
ASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGAEVLLDSVMPLSDDDQFSP
EADAAMSEMTGNTALLAQVTSYSPTGLPLIQLWSVVGDEAGALTAPTDFFLSIEHLLYAK
HPAGGFKDETNIEPLGSFSVLGVGFDDLGADGAFLSGCLLPLCNGILAIADTDLIGLGYT
LGTGRDLEKVLPLECNVYTKAHQVHTS

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_3|2964_bp
atggcaatccagttccgttcgctcttccccttggcattgcctgggatgctggcgctcctc
ggctggtggtggtttttctctcgtaaaaaaggccatgtcagcagccatgatgagcagcag
gtggaggctggtgctgtgcagctgagggctgaccctgccatcaaggaacctctccccgtg
gaagacgtctgtcccaaagtagtgtccacaccccccagtgtcacagagcctccagaaaag
gaactgtccaccgtgagcaagctgcctgcagagcccccagcattgctccagacacaccca
ccttgccgaagatcagagtcctcgggcattcttcctaacaccacagacatgagattgcga
ccaggaacacgcagagatgacagtacaaagctggagctagccctgacaggtggtgaagcc
aaatcgattcctctagagtgccccctttcatccccaaagggtgtactattctccagcaaa
tcagctgaggtgtgtaagcaagattcccccttcagcagggtgccaaggaaggtccagcca
ggctaccccgtagtccccgcagagaagcgtagctctggggagagggcaagagagacaggt
ggggccgaagggactggtgatgccgtgttgggggaaaaggtgcttgaagaagctctgttg
tctcgggagcatgtcttggaattggagaacagcaagggccccagcctggcctctttagag
ggggaagaagataaggggaagagcagctcatcccaggtggtggggccagtgcaggaggaa
gagtatgtagcagagaagttgccaagtaggttcatcgagtcggctcacacagagctggca
aaggacgatgcggcgccagcacccccagtcgcagacgccaaagcccaggatagaggtgtc
gagggagaactgggcaatgaggagagcttggatagaaatgaggagggcttggatagaaat
gaggagggcttggatagaaatgaggagagcttggatagaaatgaggagggcttggataga
aatgaggagattaagcgggctgccttccagataatctcccaagtgatctcagaagcaacc
gaacaggtgctggccaccacggttggcaaggttgcaggtcgtgtgtgtcaggccagtcag
ctccaagggcagaaggaagagagctgtgtcccagttcaccagaaaactgtcttgggccca
gacactgcggagcctgccacagcagaggcagctgttgccccgccggatgctggcctcccc
ttgccaggcctaccagcagagggctcaccaccaccaaagacctacgtgagctgcctgaag
agccttctgtccagccccaccaaggacagtaagccaaatatctctgcacaccacatctcc
ctggcctcctgcctggcactgaccacccccagtgaagagttgccggaccgggcaggcatc
ctggtggaagatgccacctgtgtcacctgcatgtcagacagcagccaaagtgtccctttg
gtggcttctccaggacactgctcagattctttcagcacttcagggcttgaagactcttgc
acagagaccagctcgagccccagggacaaggccatcaccccgccactgccagaaagtact
gtgcccttcagcaatggggtgctgaagggggagttgtcagacttgggggctgaggatgga
tggaccatggatgcggaagcagatcattcaggaggttctgacaggaacagcatggattcc
gtggatagctgttgcagtctcaagaagactgagagcttccaaaatgcccaggcaggctcc
aaccctaagaaggtcgacctcatcatctgggagatcgaggtgccaaagcacttagtcggt
cggctaattggcaagcaggggcgctatgtgagttttctgaagcaaacatctggtgccaag
atctacatttcaaccctgccttacacccagagcgtccagatctgccacatagaaggctct
caacatcatgtagacaaagcgctgaacttgattgggaagaagttcaaagagctgaacctc
accaatatctacgctcccccattgccttcactggcactgccttctctgccgatgacatcc
tggctcatgctgcctgatggcatcaccgtggaggtcattgtggtcaaccaggtcaatgcc
gggcacctgttcgtgcagcagcacacacaccctaccttccacgcgctgcgcagcctcgac
cagcagatgtacctctgttactctcagcctggaatccccaccttgcccaccccagtggaa
ataacggtcatctgtgccgcccctggtgcggacggggcctggtggcgagcccaagtggtt
gcctcctacgaggagaccaacgaagtggagattcgatacgtggactacggcggatataag
agggtgaaagtagacgtgctccggcaaatcaggtctgactttgtcaccctgccgtttcag
ggagcagaagtccttctggacagtgtgatgcccctgtcagacgatgaccagttttcaccg
gaagcagatgccgccatgagcgagatgacggggaatacagcactgcttgctcaggtgaca
agttacagtccaactggtcttcctctgattcagctgtggagtgtggttggagatgaagca
ggagctctgactgctcccactgatttctttctctccattgagcacctgctgtatgccaag
catcctgctgggggcttcaaagatgaaacaaacattgagcctttagggagcttctctgtt
ttgggagtggggtttgatgatctcggtgcagatggtgctttcctgagtgggtgccttctc
ccactttgtaatgggatcctggcaattgctgacacggatttaattggtctgggctacacc
ctgggcactgggagagatttagaaaaagtattacctttggagtgtaacgtgtacaccaaa
gcacaccaagtgcacacatcttga

>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_4|425_aa
MAGKTSRPTLTPSSPPTLTPSSRPTLTPCSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTP
SSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTP
TLTPSSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTP
SNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRP
ILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTP
SSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTP
TLTPSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPCSRPTLYFTASCSLLP
KLPRG

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_4|1278_bp
atggctggaaaaacaagccggcccaccctcaccccctccagcccacccaccctcaccccc
tccagccggcccaccctcaccccctgcagcacacccaccctcaccccctccagcacaccc
accctcaccccctccaacacacccaccctcaccccctccaacacacccaccctcaccccc
tccagcccgcccaccctcaccccctccagcacgcccaccctcaccccctccagccagccc
atcctcacccgctccagcacacccaccctcaccccctccagcccgcccaccctcaccccc
tccaacacacccaccctcaccccctccaacacacccaccctcaccccctccagcacaccc
accctcaccccctccagcacacccaccctcaccccctccaacacacccaccctcaccccc
tccagcacgcccaccctcaccccctccagcacgcccaccctcaccccctccagccagccc
atcctcacccgctccagcacacccaccctcaccccctccagcccacccaccctcaccccc
tccaacacacccaccctcaccccctccaacacacccaccctcaccccctccaacacaccc
accctcaccccctccagcacacccaccctcaccccctccagcacgcccaccctcaccccc
tccagccggcccatcctcacccgctccagcacacccaccctcaccccctccagccggccc
atcctcacccgctccagcacgcccaccctcaccccctccagcacgcccaccctcaccccc
tccagcacacccaccctcaccccctccagcacgcccaccctcaccccctccagccggccc
atcctcacccgctccagcacgcccaccctcaccccctccagccggcccatcctcaccccc
tccagcacacccaccctcaccccctccagccggcccatcctcacccgctccagcacaccc
accctcaccccctccagcacgcccaccctcaccccctccaacacacccaccctcaccccc
tccaacacacccaccctcaccccctccaacacacccaccctcaccccctccagcacaccc
accctcaccccctccagcacacccaccctcaccccctccagccggcccatcctcaccccc
tccagcacacccaccctcaccccctccagccggcccatcctcacccgctccagcacaccc
accctcaccccctgcagccggcccaccctctatttcaccgcttcctgctcacttcttccc
aagttacccagaggctga

>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_5|24_aa
MIAALINIAAGEIYMGRDQRSHED

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_5|75_bp
atgattgctgccctcatcaatattgctgccggcgaaatctacatgggacgcgatcagagg
agtcatgaagattag

>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_6|214_aa
MGKQFDKLWYIHTTEDYTAAKKTNKTTDALRSAASSLMADEQNVFAEAPLHLLSTLITSQ
KFTLKEALCRFLIKALPKPYACTELYKLGTTIPQPGKRPGTENREKYLVHGIGKIRVCKD
GLWKHLEVLAWCEEHREISWPNRTPVALDASLNQIYIRSVSCLSFPKASWAAYSHSQRAA
LPPHDKSLLEVTGAPRAQPKQVTPTLRDRGPSSV

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_6|645_bp
atggggaaacagtttgataaattatggtacattcatacaacagaagattatacagctgct
aaaaagaccaacaagactactgatgccttgagatcagctgcctcaagtctcatggcagat
gagcagaatgtctttgctgaagcacccttgcatcttctgagcacactcatcacctcgcag
aagttcactttgaaagaggccttgtgtcgctttctgatcaaggctcttcccaagccttat
gcctgtactgagttgtacaagttagggaccaccatccctcaacctgggaaaaggcctggc
acagagaacagagagaaatatttggtgcatggaatcggtaaaataagggtgtgcaaggat
gggctgtggaagcacctagaggtgctggcctggtgtgaagagcatcgggaaatctcatgg
ccaaatcggacccccgtggccttggatgccagcctcaatcagatctacattcgaagtgtc
tcctgcctttccttccccaaagcctcctgggcagcctactcccacagccagagagctgca
ttaccccctcatgacaagtcgctgttggaggtcactggggcaccaagagcccagccgaag
caggtgactccaaccctcagagacagagggccctcaagtgtctga

>gi568815581f:57005465_57220321|GENSCAN_predicted_peptide_7|129_aa
MLQQKALSSYKDFSKGSPEMSDNEPFTASEGWLNRSRNRFGLKNRNTTREAASANEEVAA
TFLAKLKKLINEKGYPPKQVFNCNEIWIFWEKMGNRTYIHKSAKEVPGQKTWKDRLALLP
CDNTAGHMI

>gi568815581f:57005465_57220321|GENSCAN_predicted_CDS_7|390_bp
atgttgcagcagaaagcattgagttcatacaaagacttcagcaagggatcccctgaaatg
agcgacaacgagccatttactgcaagtgagggatggttaaacagatccaggaataggttt
ggactgaaaaatagaaatactactagagaggccgcatctgccaatgaagaagttgctgcc
acatttctggcaaagttgaagaagttaattaacgagaaaggataccctccaaagcaagtc
ttcaattgcaatgaaatctggattttctgggagaagatgggcaatagaacctacattcat
aaaagtgcaaaggaagtaccagggcagaaaacatggaaggacagattagctctgttgcca
tgtgacaatactgcagggcatatgatatag