GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:43:47

Sequence gi568815582r:58608174_58834228 : 226055 bp : 44.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1466   1461    6                               1.05
 1.05 Term -  21131  20845  287  0  2   74   40   142 0.343   3.57
 1.04 Intr -  22376  22331   46  2  1   92   32    25 0.029  -4.72
 1.03 Intr -  32953  32804  150  1  0   83  106   188 0.952  20.46
 1.02 Intr -  36819  36739   81  0  0   69  101    97 0.991   8.93
 1.01 Init -  36929  36876   54  2  0  109   90    31 0.982   6.68
 1.00 Prom -  38856  38817   40                              -4.46

 2.11 PlyA -  39100  39095    6                               1.05
 2.10 Term -  59314  59212  103  0  1  119   41   171 0.999  13.25
 2.09 Intr -  61994  61940   55  0  1  112  103    26 0.999   4.54
 2.08 Intr -  63071  62872  200  1  2   66   80   416 0.999  37.59
 2.07 Intr -  64070  63923  148  0  1  120   89   269 0.992  29.49
 2.06 Intr -  67881  67767  115  0  1   71  109   149 0.998  15.32
 2.05 Intr -  68173  68116   58  0  1   85   50    64 0.825   1.19
 2.04 Intr -  69251  69153   99  1  0   72   94   189 0.999  17.13
 2.03 Intr -  70301  70160  142  0  1  105   36   148 0.920  10.71
 2.02 Intr -  70721  70523  199  2  1  100   44   277 0.996  23.42
 2.01 Init -  71953  71684  270  1  0  108  101   360 0.962  36.27
 2.00 Prom -  93059  93020   40                              -3.56

 3.00 Prom +  96550  96589   40                              -2.06
 3.01 Init +  96857  96871   15  1  0   66   80     6 0.419  -1.95
 3.02 Intr +  97162  97245   84  0  0   30   77    73 0.255   0.42
 3.03 Term +  98706  98861  156  2  0  107   43    96 0.471   4.93
 3.04 PlyA +  98932  98937    6                              -0.45

 4.11 PlyA -  98979  98974    6                               1.05
 4.10 Term - 100120  99998  123  1  0   81   35   236 0.935  15.98
 4.09 Intr - 101394 101244  151  2  1   50  109   210 0.713  19.46
 4.08 Intr - 108006 107841  166  1  1   57   58   201 0.837  13.02
 4.07 Intr - 108640 108490  151  1  1   97  103   156 0.999  17.74
 4.06 Intr - 110127 110023  105  0  0   86  100    34 0.964   4.81
 4.05 Intr - 110515 110354  162  1  0   89   89   103 0.778  10.67
 4.04 Intr - 111082 111023   60  1  0   70  105    43 0.844   3.13
 4.03 Intr - 114105 113977  129  0  0   57  102   135 0.999  12.69
 4.02 Intr - 115729 115573  157  0  1   72  105   169 0.879  17.01
 4.01 Init - 126055 125967   89  1  2  109  115   165 0.999  19.43
 4.00 Prom - 133172 133133   40                              -5.06

 5.00 Prom + 133388 133427   40                              -4.46
 5.01 Init + 140518 140660  143  0  2   78   48   200 0.991  12.61
 5.02 Term + 141027 141183  157  0  1   81   37   117 0.951   3.31
 5.03 PlyA + 141468 141473    6                               1.05

 6.02 PlyA - 142551 142546    6                               1.05
 6.01 Sngl - 145974 145552  423  0  0   91   48    96 0.473   2.39
 6.00 Prom - 151081 151042   40                              -2.56

 7.00 Prom + 164129 164168   40                              -3.96
 7.01 Sngl + 169071 169382  312  2  0   61   44   335 0.998  22.33
 7.02 PlyA + 170471 170476    6                               1.05

 8.06 PlyA - 170567 170562    6                               1.05
 8.05 Term - 174164 173505  660  2  0  -92   42   344 0.260   5.71
 8.04 Intr - 174660 174286  375  0  0  -11   41   274 0.182   8.01
 8.03 Intr - 182189 181878  312  2  0    1   64   160 0.106   1.28
 8.02 Intr - 182734 182551  184  0  1   61   58   104 0.109   4.49
 8.01 Init - 182928 182819  110  0  2   82    5   152 0.512   4.17
 8.00 Prom - 214011 213972   40                              -2.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_1|205_aa
MQANLEMAGNGVTSMGMEPLAIPHIYCCSEGTCNFSNTENHCLRAVLEAYGMIQGIGLNI
YHRYSPWWEARGYQGHYTADMSNLFRRYQFNVATWGAATNEDALLLRWERVGIGFRGLGL
LAGGTVFGVFACFQFFSVYSELPLSPSYAPSTLSKPPRFRVSPDGKGGREQALPYYLLQV
LFHSRAWALTLSLKLAPTYSVRCLQ

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_1|618_bp
atgcaggccaatttagaaatggcaggaaatggggtgacttccatgggaatggagcctctg
gccattcctcacatctactgctgctctgagggcacctgcaacttcagcaacacagagaac
cactgcctgagagcggtcctagaagcttatggcatgattcagggcattggcctcaacatt
taccaccgctactcaccctggtgggaggcacgtggctaccaggggcattacactgctgac
atgagcaaccttttccgaagataccagttcaacgtggccacctggggcgcagcgacgaac
gaagacgcattacttctgcgatgggaacgggtgggcatcggcttccgaggcctagggctt
ctggcgggggggaccgtgtttggagtttttgcatgtttccagttcttctccgtgtactcg
gagctgccactctccccgtcttacgcccccagcacgttgtcaaagccccccaggtttcgg
gtgtccccggatgggaagggcgggcgggagcaagcacttccttattacttgctacaggtt
ttgttccactcgcgcgcctgggcgctcacactttctttgaagttggcccccacctactcg
gtccggtgtctgcagtag

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_2|462_aa
MAQVSINNDYSEWDLSTDAGERARLLQSPCVDTAPKSEWEASPGGLDRGTTSTLGAIFIV
VNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVILAYCSQASNERTYQEVVW
AVCGKLTGVLCEVAIAVYTFGTCIAFLIIIGDQQDKIIAVMAKEPEGASGPWYTDRKFTI
SLTAFLFILPLSIPREIGFQKYASFLSVVGTWYVTAIVIIKYIWPDKEMTPGNILTRPAS
WMAVFNAMPTICFGFQCHVSSVPVFNSMQQPEVKTWGGVVTAAMVIALAVYMGTGICGFL
TFGAAVDPDVLLSYPSEDMAVAVARAFIILSVLTSYPILHFCGRAVVEGLWLRYQGVPVE
EDVGRERRRRVLQTLVWFLLTLLLALFIPDIGKVISVIGGLAACFIFVFPGLCLIQAKLS
EMEEVKPASWWVLVSYGVLLVTLGAFIFGQTTANAIFVDLLA

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_2|1389_bp
atggcccaggtcagcatcaacaatgactacagcgagtgggacttgagcacggatgccggg
gagcgggctcggctgctgcagagtccctgtgtggacacagcccccaagagtgagtgggaa
gcctctcctgggggtctggacagaggcaccacttccacacttggggccatcttcatcgtc
gtcaacgcgtgcctgggtgcagggttactcaacttcccagcagccttcagcactgcgggg
ggcgtggcagcaggcatcgcactgcagatgggtatgctggttttcatcatcagtggcctt
gtcatcctggcctactgctcccaggccagcaatgagaggacctaccaggaggtggtatgg
gctgtgtgtggcaagctgacaggtgtgctatgtgaggtggccatcgctgtctacaccttt
ggcacctgcattgccttcctaatcatcattggcgaccagcaggacaagattatagctgtg
atggcgaaagagccggagggggccagcggcccttggtacacagaccgcaagttcaccatc
agcctcactgccttcctcttcatcctgcccctctccatccccagggagattggtttccag
aaatatgccagcttcctgagcgtcgtgggtacctggtacgtcacagccatcgttatcatc
aagtacatctggccagataaagagatgaccccagggaacatcctgaccaggccggcttcc
tggatggctgtgttcaatgccatgcccaccatctgcttcggatttcagtgccacgtcagc
agtgtgcccgtcttcaacagcatgcagcagcctgaagtgaagacctggggtggagtggtg
acagctgccatggtcatagccctcgctgtctacatggggacaggcatctgtggcttcctg
acctttggagctgctgtggatcctgacgtgctcctgtcctatccctcggaggacatggcc
gtggccgttgcccgagccttcatcatcctgagcgtgctcacctcctaccctatcctgcac
ttctgtgggcgggcggtggtggaaggcctgtggctgcgctaccagggggtgccagtggag
gaggacgtggggcgggagcggcggcggcgagtgctgcagacgctggtctggttcctgctc
accctgctgctggcgctcttcatccctgacatcggcaaggtgatctcagtcattggaggc
ctggccgcctgcttcatcttcgtcttcccagggctgtgcctcattcaagccaaactctct
gagatggaagaggtcaaaccagccagctggtgggtgctggtcagctacggagtcctcttg
gtcaccctgggagccttcatcttcggccagaccacagccaacgccatctttgtggatctc
ttggcataa

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_3|84_aa
MADLWKTIKLQTPHDEWDLVQCKVVVPMFKNNKDPSWDSTCSPQGPRDYTHILSIFGLDK
LNGNMKKTTNLQPIFGIVDTSTGL

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_3|255_bp
atggctgatctatggaaaaccatcaagctgcagacaccacatgatgaatgggacttagtc
cagtgtaaggtggtagtacccatgtttaaaaataacaaggatccttcatgggactccact
tgttccccacaaggtccaagggattacacccacattctcagcatcttcggactggacaaa
ctgaatggcaacatgaagaaaacgacgaatcttcagccaatatttggaatagtggataca
tctactggcttatga

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_4|430_aa
MALLHSGRVLPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKM
NLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEV
LKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYR
YYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFA
FFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADE
AKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVS
NLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGY
LAHAIHQVTK

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_4|1293_bp
atggccctgctgcactccggccgcgtcctccccgggatcgccgccgccttccacccgggc
ctcgccgccgcggcctctgccagagccagctcctggtggacccatgtggaaatgggacct
ccagatcccattctgggagtcactgaagcctttaagagggacaccaatagcaaaaagatg
aatctgggagttggtgcctaccgggatgataatggaaagccttacgttctgcctagcgtc
cgcaaggcagaggcccagattgccgcaaaaaatttggacaaggaatacctgcccattggg
ggactggctgaattttgcaaggcatctgcagaactagccctgggtgagaacagcgaagtc
ttgaagagtggccggtttgtcactgtgcagaccatttctggaactggagccttaaggatc
ggagccagttttctgcaaagattttttaagttcagccgagatgtctttctgcccaaacca
acctggggaaaccacacacccatcttcagggatgctggcatgcagctacaaggttatcgg
tattatgaccccaagacttgcggttttgacttcacaggcgctgtggaggatatttcaaaa
ataccagagcagagtgttcttcttctgcatgcctgcgcccacaatcccacgggagtggac
ccgcgtccggaacagtggaaggaaatagcaacagtggtgaagaaaaggaatctctttgcg
ttctttgacatggcctaccaaggctttgccagtggtgatggtgataaggatgcctgggct
gtgcgccacttcatcgaacagggcattaatgtttgcctctgccaatcatatgccaagaac
atgggcttatatggtgagcgtgtaggagccttcactatggtctgcaaagatgcggatgaa
gccaaaagggtagagtcacagttgaagatcttgatccgtcccatgtattccaaccctccc
ctcaatggggcccggattgctgctgccattctgaacaccccagatttgcgaaaacaatgg
ctgcaagaagtgaaagtcatggctgaccgcatcattggcatgcggactcaactggtctcc
aacctcaagaaggagggttccacccacaattggcaacacatcaccgaccaaattggcatg
ttctgtttcacagggctaaagcctgaacaggtggagcggctgatcaaggagttctccatc
tacatgacaaaagatggccgcatctctgtggcaggggtcacctccagcaacgtgggctac
cttgcccatgccattcaccaggtcaccaagtaa

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_5|99_aa
MLAALAHPWCLLGLAPTLATLEEPFSPPLHCGSPFLGWTDAGAGSLSLAPGPINRPRAEG
CRHTVGDWQAAPPAAVVRDPLDEASWAPESSGHLENLYV

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_5|300_bp
atgctggcagccctcgctcacccttggtgcctcctcggcctcgcgcccactctggccacg
cttgaggagcccttcagcccgccgctgcactgtgggagccccttcctgggatggaccgac
gccggagccggctccctcagcctggcgcctggtcccatcaaccgcccaagggctgagggg
tgccggcacacggtgggggactggcaggcagctccacctgcggccgtggtgcgggatcca
ctggatgaagccagctgggctccggagtctagtgggcatttggagaacctttatgtctag

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_6|140_aa
MTLHSLLAESSCPDGKQGQGRASPSCWPEQDDRTDRAINTPPPVRLWTARPKELLDCCNT
PSGASGSQAPLLGHHCVPLSVTHLVQLQDPHGACSCASTWNSQPDPTLAGSQIHFCQELS
KQLQQPWDCARVQARCGLVG

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_6|423_bp
atgaccctccactctctgctggcggagagcagctgccccgacgggaagcaggggcagggc
agagccagcccgagctgctggccggagcaggacgacaggactgacagagctattaacacg
ccaccacctgtcaggctgtggacggccagaccaaaagagctattagattgctgtaacacc
ccctctggggcttccgggtctcaggcacccctgcttgggcaccactgtgttcccctcagt
gtgacacacctggtccagctgcaagacccacatggagcctgctcctgtgccagcacttgg
aacagccagccagatcctacacttgctggctcacagatccacttctgccaggagctgagc
aagcagttgcagcagccatgggattgtgccagagtgcaagccaggtgtggcctggtgggc
tga

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_7|103_aa
MEITEDLCQYFAETGRHREEQGWRQQLDAECLDSYVNADHDLCYNTHWWVEPPTERPSKR
CQAEMKRLYGNSTAKLQAMEASVQLSFDKHCDQKQPSSGWSCL

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_7|312_bp
atggaaatcactgaggatctctgccagtactttgcagaaaccgggaggcacagagaagaa
caagggtggcggcagcagctggatgcagaatgcttggacagctatgtgaatgccgaccac
gacctttgctacaacacccactggtgggtggagcccccgactgagcggcccagcaagcgg
tgccaggctgagatgaagcgcttgtatgggaacagcactgccaagctccaggccatggag
gcttcggtgcagctgagctttgacaagcactgtgaccaaaagcagcccagttctggctgg
tcatgcctgtga

>gi568815582r:58608174_58834228|GENSCAN_predicted_peptide_8|546_aa
MGLVGSTLGTAGSAAGPASPAAAGNEGLSTQASGCGGAQDLQPAMPKPPTPSMGSCAAGA
SQMSAAPCSTAPRPIDHQRAEECGRTAQDWQATPPAAPGCSFTPEANKTTSPPGGKNNSR
RTTLRAVTLTAKVCSFTPEPARPRTHQKEETPNTSEHQKEQTPDTLPLRTVTLTARVRGF
ILEVSETKNPPIPDTPALREAEELVLEKINKIDRLLARLIKKKREKNQKDAIKNDKGDIT
NDPTDIQTTIREYYKHLYENKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIEAT
INSLPTKKCPGPDGFTAEFYQRYKEELNFGPIPLMNINAKILNKIPANQIQQHIKKVIRH
DQVGFIPGMQGWFNIRKSINVIHHINRTKDKNHTIISIDAEKAFDKIQQPFMLKTLNKLG
IDGTYLKIIRATYDKPTANITVNAQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIMQ
EKEIKGIQLGKEEVKLSLFADDMIVHLENPMVSAQNLLKLISNFSKVSGYKINVKNHKHS
YAPITD

>gi568815582r:58608174_58834228|GENSCAN_predicted_CDS_8|1641_bp
atgggcttggtgggctccacactcggaacagccggcagcgcagccggccctgccagccct
gccgccgcgggcaatgaggggcttagcacccaggccagcggctgcggaggggctcaggac
ctgcagcccgccatgcctaagcctcccaccccctccatgggctcctgtgcagctggagcc
tcccagatgagcgcggccccctgctccacggcacccaggcccatcgaccaccaaagggct
gaggagtgcgggcgcacggcacaggactggcaggccactccacctgcagccccgggctgc
agcttcactcctgaagccaacaagaccacgagcccaccgggaggaaagaacaactccaga
cgcaccaccttaagagctgtaacactcaccgcgaaggtctgcagcttcactcctgagcca
gcaagaccacgaacccaccagaaggaagaaactccaaacacatctgaacatcagaaggaa
caaactccagacacgctgcctttaagaactgtaacactcaccgcaagggtccgtggcttc
attctcgaagtcagtgagaccaagaacccaccgattccggacacaccagcacttcgggag
gccgaggagctggtacttgaaaagatcaacaaaattgatagactgctggcaagactaata
aagaagaaaagagagaagaatcaaaaagatgcaataaaaaatgataaaggggatatcacc
aacgatcccacagacatacaaactaccatcagagaatactataaacacctctatgaaaat
aaactagaaaatctagaagaaatggataaattcctggacacatacaccctcccaagacta
aaccaggaagaagttgaatccctgaatagaccaataacaggctctgaaattgaggcaaca
attaatagcctaccaaccaaaaaatgtccaggaccagatggattcacagccgaattctac
cagaggtacaaggaggagctgaattttggaccaatacccctgatgaacatcaatgcaaaa
atcctcaataaaataccggcaaaccaaatccagcagcacatcaaaaaggttatccgccat
gatcaagtgggcttcatccctgggatgcaaggctggttcaacatacgaaaatcaataaac
gtaatccatcatataaacagaaccaaagacaaaaaccacacgattatctcaatagatgca
gaaaaggcctttgacaaaattcaacagcccttcatgctaaaaactctcaataaattaggt
attgatgggacgtatctcaaaataataagagctacttatgacaaacccacagccaatatc
acagtgaatgcgcagaaactggaagcattccctttgaaaactggcacaagacagggatgc
cctctctcaccactcctattcaacatagtgttggaagttctggccagggcaatcatgcag
gagaaagaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgca
gatgacatgattgtgcatttagaaaaccctatggtctcagcccaaaatctccttaagctg
ataagcaacttcagcaaagtctcaggatacaaaatcaatgtgaaaaatcacaagcattct
tatgcaccaataacagactaa