GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:05:30

Sequence gi568815587f:7887353_8096019 : 208667 bp : 44.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  13777  13850   74  2  2   93   35   109 0.549   4.17
 1.02 PlyA +  13965  13970    6                               1.05

 2.04 PlyA -  16275  16270    6                               1.05
 2.03 Term -  18464  18273  192  2  0   65   47   185 0.789   9.52
 2.02 Intr -  28047  27903  145  2  1   45   62    71 0.158   0.48
 2.01 Init -  33990  33572  419  0  2   71   53   129 0.129   3.60
 2.00 Prom -  34044  34005   40                              -4.46

 3.03 PlyA -  34161  34156    6                               1.05
 3.02 Term -  34657  34205  453  1  0   19   48   199 0.376   4.16
 3.01 Init -  36155  35487  669  2  0   66   41   280 0.361  16.31
 3.00 Prom -  46126  46087   40                              -6.16

 4.06 PlyA -  46508  46503    6                               1.05
 4.05 Term -  47313  47140  174  0  0   97   41    45 0.029  -1.54
 4.04 Intr -  52096  51959  138  1  0   45  105    91 0.004   7.16
 4.03 Intr -  61061  60919  143  0  2   58   71    82 0.014   3.57
 4.02 Intr -  73970  72528 1443  0  0   63   61  1075 0.021  91.90
 4.01 Init -  76143  75855  289  0  1  104  101   285 0.872  26.68
 4.00 Prom -  81249  81210   40                              -3.16

 5.00 Prom +  84610  84649   40                              -1.76
 5.01 Init +  96699  96774   76  2  1   73   83    56 0.449   3.71
 5.02 Intr +  99648 100021  374  1  2   42  100   258 0.450  17.18
 5.03 Intr + 100071 100273  203  2  2   24   25   256 0.712  10.98
 5.04 Intr + 100279 100364   86  1  2   41   92   142 0.976   9.36
 5.05 Intr + 104429 104499   71  0  2   96   81    77 0.998   6.70
 5.06 Intr + 104732 104811   80  1  2  102  119    71 0.999   9.95
 5.07 Intr + 105535 105672  138  1  0   78   60   246 0.998  20.38
 5.08 Intr + 107074 107165   92  1  2  108  105   151 0.997  18.44
 5.09 Intr + 107630 107766  137  0  2   44   85   144 0.999   9.99
 5.10 Intr + 107902 108015  114  0  0   64   82   185 0.999  16.14
 5.11 Term + 108593 108670   78  1  0  140   42    86 0.998   6.96
 5.12 PlyA + 108790 108795    6                               1.05

 6.08 PlyA - 108841 108836    6                               1.05
 6.07 Term - 115956 115897   60  0  0   93   43    43 0.107  -1.90
 6.06 Intr - 125435 125309  127  1  1   53  109    48 0.054   4.08
 6.05 Intr - 130456 130344  113  1  2   71   84    41 0.006   1.18
 6.04 Intr - 144384 144216  169  2  1  119   15   135 0.373   9.25
 6.03 Intr - 146668 146596   73  2  1   56   74    33 0.436  -2.84
 6.02 Intr - 149168 149120   49  2  1   89   89    18 0.211   0.25
 6.01 Init - 149880 149797   84  0  0   68   75    62 0.514   3.72
 6.00 Prom - 155110 155071   40                              -0.26

 7.03 PlyA - 155448 155443    6                               1.05
 7.02 Term - 175610 175520   91  1  1  117   45    97 0.471   5.49
 7.01 Init - 182739 182645   95  0  2   85   49    72 0.388   2.85
 7.00 Prom - 186734 186695   40                              -3.46

 8.00 Prom + 189622 189661   40                              -7.36
 8.01 Init + 194059 194196  138  0  0   72  101   148 0.999  12.64
 8.02 Intr + 195094 195266  173  0  2   67   36   202 0.419  11.64
 8.03 Intr + 202258 202309   52  1  1   88  109    72 0.935   8.21
 8.04 Intr + 202717 202879  163  0  1   57   69   293 0.989  23.85
 8.05 Intr + 206694 206837  144  1  0   18   82    89 0.584   1.55
 8.06 Intr + 208146 208313  168  1  0   74   84   151 0.640  13.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  73970  72292 1679  0  2   63   40  1104 0.968  92.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_1|24_aa
XIMVLEVVYENKYQKYEKDLHENE

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_1|75_bp
nggataatggtcctggaagttgtgtatgagaacaaatatcagaaatatgaaaaggatctg
catgagaacgagtaa

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_2|251_aa
MGKDFMSKTPKAMATKDKIDKWGLIKLKSFCTAKETTIRVNRQPTKREKIFATYSSDKEL
ISRIYNELKQIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMEIKTT
MRYHLTPVRMAIIKKSGNNRSPQTITDAELQVTLTVEDKPIPFLISTEATHSTLPSFQGP
VSLASITVVHAGYIVVPQTVTQLGSQQVVTQNRDAKDANKWRLNTGLRRCEQKRSAGAEK
LKLTRQTGTPG

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_2|756_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagacaaaattgac
aaatggggtctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aataggcaacctacaaaacgggagaaaatttttgcaacctactcatctgacaaagagcta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggtgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaa
aagcacatgaaaaaatgctcatcatcactggccatcagagaaatggaaatcaaaaccaca
atgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaga
agcccccagaccatcacggacgctgagcttcaggtaactctcacagtggaagataagccc
atccccttcttaatcagtacggaggctacccactccacattaccttcttttcaagggcct
gtttcccttgcctccataactgttgtccatgcaggttacatagtggtgccccaaacagtg
acacaattgggttctcaacaagtggtgactcagaacagggacgccaaggatgccaacaag
tggcgtctgaacacgggacttcgacgatgtgaacaaaaaagatctgctggagcagagaag
ctgaaattgacaaggcaaacggggaccccaggatga

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_3|373_aa
MKAEIKMFFETNENKDTTYQDLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESKSWFFERINKIDRPLARLIKKKR
EKNQIDTIKNDKGDMTTDPTEIQTTIREYYKHLYAKKLENLEEMDKFLNTYILPRLNQEE
VESLNRPITGAEIVAIINSLPIKKSPGPDGFTAKFSQRYKEELRIKYLGIQLTRDVKDLF
NENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMALLPKVIYRFNAIPIKLPMTFFTELE
KTTLKFIWNQKRAHFAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQNRA
LGNNTAYLQLSDL

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_3|1122_bp
atgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacacaacataccag
gatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaa
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagca
gaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatccaagagctgg
ttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaaaga
gagaagaatcaaatagacacaataaaaaatgataaaggggatatgaccactgatcccaca
gaaatacaaactaccatcagagaatactacaaacacctctatgcaaaaaaactagaaaat
ctagaagaaatggataaattcctcaacacatacattctcccaagactaaaccaggaagaa
gttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatcaatagctta
ccaatcaaaaagagtccaggaccagatggattcacagccaaattctcccagaggtacaag
gaggaactgagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttc
aatgagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaac
attccatgctcatgggtaggaagaatcaatatcgtgaaaatggccttactgcccaaggta
atttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaa
aaaactaccttaaagttcatatggaaccaaaaaagagcccactttgccaagtcaatccta
agccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggct
acagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcagaacagagcc
ctcggaaataacaccgcatatctacaactatctgatctttga

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_4|728_aa
MAMAKARKPREALLWALSDLEENDFKKLKFYLRDMTLSEGQPPLARGELEGLIPVDLAEL
LISKYGEKEAVKVVLKGLKVMNLLELVDQLSHICLHDYREVYREHVRCLEEWQEAGVNGR
YNQVLLVAKPSSESPESLACPFPEQELESVTVEALFDSGEKPSLAPSLVVLQGSAGTGKT
TLARKMVLDWATGTLYPGRFDYVFYVSCKEVVLLLESKLEQLLFWCCGDNQAPVTEILRQ
PERLLFILDGFDELQRPFEEKLKKRGLSPKESLLHLLIRRHTLPTCSLLITTRPLALRNL
EPLLKQARHVHILGFSEEERARYFSSYFTDEKQADRAFDIVQKNDILYKACQVPGICWVV
CSWLQGQMERGKVVLETPRNSTDIFMAYVSTFLPPDDDGGCSELSRHRVLRSLCSLAAEG
IQHQRFLFEEAELRKHNLDGPRLAAFLSSNDYQLGLAIKKFYSFRHISFQDFFHAMSYLV
KEDQSRLGKESRREVQRLLEVKEQEGNDEMTLTMQFLLDISKKDSFSNLELKFCFRISPC
LAQDLKHFKEQMESMKHNRTWDLEFSLYEAKIKNLVKVGAKPLFSDIDQLVGTDAPGEAV
LLGADSSGLSGTRKIFIPEDSSFLKVQLFGVFLVIYVVTLMGNAIITVIISLNQSLHVPM
YLFLLNLSVVEKLFSLIRFHLSILAFVAIAFGVILIPKPGRDTTKKDNFRPISLMNIDAK
ILNKILAN

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_4|2187_bp
atggccatggccaaggccagaaagccccgggaggcattgctctgggccttgagtgacctt
gaggagaacgatttcaagaagttaaagttctacttacgggatatgaccctgtctgagggc
cagcccccactggccagaggggagttggagggcctgattccggtggacctggcagaatta
ctgatttcaaagtatggagaaaaggaggctgtgaaagttgtcctcaagggcttgaaggtc
atgaacctgttggaacttgtggaccagctcagccatatttgtctgcatgattacagagaa
gtataccgagagcatgtgcgctgcctagaggaatggcaggaagcaggagtcaatggcaga
tacaaccaggtgctcctggtggccaagcccagctcagagagcccagaatcacttgcctgc
cccttcccggagcaggagctggagtctgtcacggtggaggctctatttgattcaggggaa
aagccctcactggccccatccttagttgtgctacaggggtcggctggcactggaaagaca
actctcgccagaaaaatggtgttggactgggccaccggtactctgtacccaggccggttt
gattatgtcttttatgtaagctgcaaagaagtggtcctgctgctggagagcaaactggag
cagctccttttctggtgctgcggggacaatcaagcccctgtcacagagattctgaggcag
ccagagcggctcctgttcatcctggatggctttgatgagctgcagaggccctttgaagaa
aagttgaagaagaggggtttgagtcccaaggagagcctgctgcaccttctaattaggaga
catacactccccacgtgctcccttctcatcaccacccggcccctggctttgaggaatctg
gagcccttgctgaaacaagcacgtcatgtccatatcctaggcttctctgaggaggagagg
gcgaggtacttcagctcctatttcacggatgagaagcaagctgaccgtgccttcgacatt
gtacagaaaaatgacattctctacaaagcgtgtcaggttccaggcatttgctgggtggtc
tgctcctggctgcaggggcagatggagagaggcaaagttgtcttagagacacctagaaac
agcactgacatcttcatggcttacgtctccacctttctgccgcccgatgatgatgggggc
tgctccgagctttcccggcacagggtcctgaggagtctgtgctccctagcagctgaaggg
attcagcaccagaggttcctatttgaagaagctgagctcaggaaacataatttagatggc
cccaggcttgccgctttcctgagtagtaacgactaccaattgggacttgccatcaagaag
ttctacagcttccgccacatcagcttccaggacttttttcatgccatgtcttacctggtg
aaagaggaccaaagccggctggggaaggagtcccgcagagaagtgcaaaggctgctggag
gtaaaggagcaggaagggaatgatgagatgaccctcactatgcagtttttactggacatc
tcgaaaaaagacagcttctcgaacttggagctcaagttctgcttcagaatttctccctgt
ttagcgcaggatctgaagcattttaaagaacagatggaatctatgaagcacaacaggacc
tgggatttggaattctccctgtatgaagctaaaataaagaatctggtaaaagtgggggcc
aagcccttattctctgacattgatcagttagtaggtacagatgccccaggtgaagcagtc
cttttaggggctgacagctcaggcctttctggcactcgcaaaatcttcattcctgaagat
tcttcattcttgaaggtgcagctctttggggttttcctagttatttatgtggtgaccctg
atgggaaatgccatcattacagtcatcatctccttaaaccagagcctccacgttcccatg
tacctgttcctcctgaacctatctgtggtggagaagctctttagtttaattagattccat
ttgtcaattttggcttttgttgccattgcttttggtgtcatcctgataccaaaacctggc
agagacacaacaaaaaaagacaatttcaggccaatatccctgatgaacatcgatgcaaaa
atcctcaataaaatactggcaaactga

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_5|482_aa
MGRQHQRVGGSITVHAAALPHEGSLSTLTSIISFKSKTRISTSALLSGSTWRQLHKVFLF
ERRPKFYPELLSPGFPECSSGQKQSAQIPEEITNGGTISVLREVSPVTNQQKALAHVVYI
QPIKLLIFMNAVISASASFFLDKMATPAVPPQFQRQRQHRLRLRFPLRLQPHPQTLRQQR
LQLRLLARPRPQRKLQRRPQRPLCLVLLFQGPSPAAAWLHPVILASIVDSYERRNEGAAR
VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYAT
GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPL
TVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLS
GKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLV
NL

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_5|1449_bp
atggggcggcagcatcagagggtgggcggcagcatcacagtgcatgcggcagctctgccc
catgagggaagccttagcactttgacatccattatctcatttaagtctaaaacacgaatt
tcgacctccgcgctgctttctggttccacctggcggcagctgcacaaagtgtttctcttc
gaacgccgtcccaagttttacccggaactacttagcccagggtttcctgagtgctcctcg
ggccaaaagcagagcgcacaaattccagaagaaattaccaacggcgggactatttcagtg
ctccgagaagtatcaccagtaaccaatcagcaaaaagctctagctcacgtggtgtatatt
cagcctatcaagctcctgatattcatgaatgctgtcatttccgcttccgcctccttcttt
ctcgacaagatggccacaccggcggtaccacctcagttccagcgccaacgccagcaccgg
ctgcggctccggttcccgctgcggctccagcctcatcctcagaccctgcggcagcagcgg
ctgcaactgcggctcctggccagaccccggcctcagcgcaagctccagcgcagaccccag
cgcccgctctgcctggtcctgctcttccagggcccttccccggcggccgcgtggctgcac
ccagtcattttggcctccattgtggacagctacgagagacgcaacgagggtgctgcccga
gttatcgggaccctgttgggaactgtcgacaaacactcagtggaggtcaccaattgcttt
tcagtgccgcacaatgagtcagaagatgaagtggctgttgacatggaatttgctaagaat
atgtatgaactgcataaaaaagtttctccaaatgagctcatcctgggctggtacgctacg
ggccatgacatcacagagcactctgtgctgatccacgagtactacagccgagaggccccc
aaccccatccacctcactgtggacacaagtctccagaacggccgcatgagcatcaaagcc
tacgtcagcactttaatgggagtccctgggaggaccatgggagtgatgttcacgcctctg
acagtgaaatacgcgtactacgacactgaacgcatcggagttgacctgatcatgaagacc
tgctttagccccaacagagtgattggactctcaagtgacttgcagcaagtaggaggggca
tcagctcgcatccaggatgccctgagtacagtgttgcaatatgcagaggatgtactgtct
ggaaaggtgtcagctgacaatactgtgggccgcttcctgatgagcctggttaaccaagta
ccgaaaatagttcccgatgactttgagaccatgctcaacagcaacatcaatgaccttttg
atggtgacctacctggccaacctcacacagtcacagattgcactcaatgaaaaacttgta
aacctgtga

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_6|224_aa
MPQSCTASLKGVSARGTRTDILHAGTCQNMTLQSVTVLCISALNDKAGYAPKFYLETNAY
SPALPVSLRCGHCQQIAHGQLGLVPGLSSYTKSETKEDGIEEVQAHPTLMRPRIAPQPLT
SRQTELLSLPFLCNTAISITTEVPNLLIELPKRIINQYLPRASLVSENAIESSGLPLRPI
KGLRGQMDPNGLQCLGEEDAKHMSQDTFTAHLDDSNPSFRLPVV

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_6|675_bp
atgccccaaagctgcacagccagcctcaagggagtcagtgcaaggggcacacgcacagac
atcctgcatgccggcacctgccagaacatgactcttcagtcggtcacagtgctttgcatt
agtgcactgaatgacaaggccgggtatgccccaaaattctacctggaaacaaacgcctat
tctccggccctccctgtatccctgcggtgcggccactgccagcagatcgcgcatggccag
ctcggactggtccctgggctctccagttacactaaaagtgagaccaaggaagatggtatc
gaggaggtgcaggctcatccaacattgatgcggccccggattgccccacagcccctcacc
tcacggcagaccgagcttttaagtttaccatttctgtgcaatacagccatctctataacc
actgaagtacccaacttgctcatagagctacccaaacgcatcattaaccaatatttacca
agggccagcttggtgtcagaaaatgccatagaaagttctgggctccccttgaggccgatt
aaagggctaagaggacagatggacccaaatgggcttcaatgtttgggtgaggaagatgca
aagcacatgagccaggacacctttactgctcatttggacgactccaatccatctttcaga
ctgccagtggtgtga

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_7|61_aa
MVCERGLCDKKASVAMLPRWLVSISNTTSIFPKRLPKSMSASPSHESADDLNTFQRQRLS
V

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_7|186_bp
atggtttgtgaacgtgggctctgtgataagaaagccagtgtggccatgttgcctcgctgg
ctagtgtcgatcagcaacaccacctccattttcccgaaaaggttaccgaagagtatgtcg
gcctctccttcccacgagagtgcagatgacctgaacaccttccagagacaacgtctgagt
gtctaa

>gi568815587f:7887353_8096019|GENSCAN_predicted_peptide_8|280_aa
MRPGAARELSRAPAPAPPGPGLQSRSHRPAPERHDFQAAFRLDSLQGRELIAMAAPDSWP
PIGSLVAMGYGAVSVENGCWTPKAHCVIVDPGARASGRQDEILSVLDDEGRNLRQQKLDR
QRALLEQKQKKKRQEPLMVQANADGRPRSRRARQSEEQAPLVESYLSSSGSTSYQVQEAD
SLASVQLGATRPTAPASAKRTKAAATAGGQGGAARKEKKGKHKGTSGPAALAEDKSEAQG
PVQILTVGQSDHAQDAGETAAGGGERPSGQDLRATMQRKX

>gi568815587f:7887353_8096019|GENSCAN_predicted_CDS_8|840_bp
atgcggcccggggcggcccgggagctgagcagggcccccgcgccggcccctccgggcccc
ggcctccagagccgcagccaccgccccgcccccgagagacatgacttccaagccgcattc
cgactggattccctacagggaagggagctcatcgccatggcagcgccagattcttggcca
cccattggctccttggttgccatgggctacggggctgtctctgtggaaaatgggtgctgg
actcctaaggcccactgtgttattgtcgacccaggtgcacgtgctagcggacggcaggat
gagatcctcagtgtcttagatgatgagggcagaaacctgaggcagcagaagcttgatcgg
cagcgggccctgctggagcagaagcagaagaagaagcgccaggagcccctgatggtgcag
gccaatgcagatgggcggccccggagccggcgggcccggcagtcagaggaacaagccccc
ctggtggagtcctacctcagcagcagtggcagcaccagctaccaagttcaagaggccgac
tcactcgccagtgtgcagctgggagccacgcgcccaacagcaccagcttcagccaagaga
accaaggcggcagctacagcagggggccagggtggcgccgctaggaaggagaagaaggga
aagcacaaaggcaccagcgggccagcagcactggcagaagacaagtctgaggcccaaggc
ccagtgcagattctgactgtgggccagtcagaccacgcccaggacgcaggggagacggca
gctggtgggggcgaacggcccagcgggcaggatctccgtgccacgatgcagaggaaggnn