Result of GENSCAN for pF1KE2741
GENSCAN 1.0	Date run: 19-Jun-119	Time: 14:24:05

Sequence gi568815589f:97956809_98183037 : 226229 bp : 46.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4569   4608   40                              -0.86
 1.01 Init +   7519   7593   75  0  0   47  116    -3 0.620  -0.49
 1.02 Term +   9532   9651  120  0  0  116   48    71 0.808   4.37
 1.03 PlyA +  10635  10640    6                               1.05

 2.00 Prom +  24772  24811   40                              -3.46
 2.01 Init +  26748  26801   54  2  0  101   61    74 0.909   7.15
 2.02 Intr +  37823  37972  150  1  0  112  115    53 0.995  10.76
 2.03 Intr +  41748  41870  123  2  0   93  111    41 0.994   7.68
 2.04 Intr +  48156  48345  190  2  1   55  113   317 0.970  30.06
 2.05 Intr +  54463  54581  119  2  2   48   78   391 0.993  34.28
 2.06 Intr +  55613  55664   52  1  1  114   86   152 0.979  16.08
 2.07 Intr +  61481  61681  201  0  0  103  100    61 0.894   8.06
 2.08 Intr +  61740  61882  143  1  2   47   73    93 0.700   3.77
 2.09 Intr +  78522  78709  188  2  2   82   44    61 0.102  -0.41
 2.10 Term +  80159  80270  112  2  1  145   54   -11 0.081  -0.77
 2.11 PlyA +  84360  84365    6                               1.05

 3.00 Prom +  90516  90555   40                              -4.76
 3.01 Init + 100001 100132  132  1  0   78  100   254 0.996  24.14
 3.02 Intr + 103974 104189  216  2  0   56  105   279 0.981  25.10
 3.03 Intr + 104306 104337   32  1  2  101   44    26 0.014  -3.57
 3.04 Intr + 121254 121539  286  0  1  116   97   233 0.162  24.34
 3.05 Intr + 124008 124274  267  2  0   79   93   274 0.999  24.73
 3.06 Term + 126038 126247  210  1  0   89   42   280 0.969  20.79
 3.07 PlyA + 126249 126254    6                               1.05

 4.06 PlyA - 127572 127567    6                               1.05
 4.05 Term - 131197 130662  536  2  2   88   50  1008 0.878  91.41
 4.04 Intr - 135193 135152   42  2  0   79   82    52 0.738   1.91
 4.03 Intr - 138221 138059  163  2  1   86  106   273 0.991  28.45
 4.02 Intr - 143356 143123  234  1  0  108   95   180 0.980  18.59
 4.01 Init - 149666 149580   87  2  0   66   50    49 0.210  -0.45
 4.00 Prom - 150761 150722   40                              -7.16

 5.03 PlyA - 152242 152237    6                               1.05
 5.02 Term - 153176 152997  180  2  0   88   48   147 0.988   8.31
 5.01 Init - 162380 162174  207  2  0   40   75   241 0.988  14.86
 5.00 Prom - 164145 164106   40                              -9.16

 6.13 PlyA - 164193 164188    6                               1.05
 6.12 Term - 168097 167966  132  1  0   89   53   233 0.992  17.99
 6.11 Intr - 169952 169741  212  0  2   85   48    89 0.532   3.23
 6.10 Intr - 171452 171362   91  2  1   92   78    61 0.988   5.07
 6.09 Intr - 171911 171799  113  0  2  103   90   226 0.999  24.40
 6.08 Intr - 173082 172986   97  0  1  145  123   230 0.999  31.78
 6.07 Intr - 174251 174147  105  2  0  136   63   170 0.960  19.71
 6.06 Intr - 175493 175377  117  2  0   69   94   139 0.994  13.26
 6.05 Intr - 176409 176230  180  0  0   76   82   227 0.954  20.96
 6.04 Intr - 178147 177998  150  1  0   92  113   240 0.998  27.26
 6.03 Intr - 180880 180764  117  1  0   78   79   138 0.965  12.56
 6.02 Intr - 200852 200652  201  2  0  132  110   340 0.999  40.08
 6.01 Init - 203966 203895   72  2  0   74  100    47 0.532   5.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 104306 104341   36  1  0  101   54    31 0.925  -1.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:97956809_98183037|GENSCAN_predicted_peptide_1|64_aa
MFPYFSDFIVLELRGTLGISWCELKVISLIQFLMNHNKNFEINCSDYQNSLEEWRYCDVE
SLSE

>gi568815589f:97956809_98183037|GENSCAN_predicted_CDS_1|195_bp
atgtttccatacttttcagacttcatagtgttagagctgagagggaccttggggatctcc
tggtgcgagttaaaggtaatttctcttattcagtttcttatgaaccataacaagaacttt
gaaatcaattgttctgattaccaaaacagtctggaggagtggcgatactgcgatgtagag
agcctcagtgaatga

>gi568815589f:97956809_98183037|GENSCAN_predicted_peptide_2|443_aa
MDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNL
PKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDL
FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDE
DDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEGVQHLKNDSGQ
RGNAQTTLCKILHPTRSCITTTRTPGTYSRTDTGELSRPVPGIPIWATLPTPSPEKALLH
CAAINFNEPDDTAVLTVWKGNQVTSRLKLQPAKQLLCRKITKIAHLLWYQARKQALETAL
VDAAVGCTGKRRQMRDVRGHKPPPETEGVDFHPPHPPECDGGFALSGALPWVQCWEGTPN
GSLTEGAYTLEGMTDKRGRCHKG

>gi568815589f:97956809_98183037|GENSCAN_predicted_CDS_2|1332_bp
atggacatgaagaggaggatccacctggagctgaggaaccggaccccggcagctgttcga
gaacttgtcttggacaattgcaaatcaaatgatggaaaaattgagggcttaacagctgaa
tttgtgaacttagagttcctcagtttaataaatgtaggcttgatctcagtttcaaatctc
cccaagctgcctaaattgaaaaagcttgaactcagtgaaaatagaatctttggaggtctg
gacatgttagctgaaaaacttccaaatctcacacatctaaacttaagtggaaataaactg
aaagatatcagcaccttggaacctttgaaaaagttagaatgtctgaaaagcctggacctc
tttaactgtgaggttaccaacctgaatgactaccgagagagtgtcttcaagctcctgccc
cagcttacctacttggatggctatgaccgagaggaccaggaagcacctgactcagatgcc
gaggtggatggtgtggatgaagaggaggaggacgaagaaggagaagatgaggaagacgag
gacgatgaggatggtgaagaagaggagtttgatgaagaagatgatgaagatgaagatgta
gaaggggatgaggacgacgatgaagtcagtgaggaggaagaagaatttggacttgatgaa
gaagatgaagatgaggatgaggatgaaggagtccagcacctgaagaatgatagtggccag
cgtggaaatgcacaaaccaccttgtgtaagatactgcaccctacccgctcctgtatcacc
accaccaggactcctggtacatactccaggacagatacaggagagttgagtcgtcctgtt
cctggcattcctatctgggctacactacctaccccatcgccagagaaagctctgttgcat
tgtgctgccatcaattttaatgagcctgatgataccgccgtgttgacagtttggaaaggg
aatcaagttactagtagacttaagctgcagccagccaaacagttgctctgcaggaaaatc
accaagattgcacacctgctgtggtaccaggcacgcaagcaggcactcgaaactgctttg
gtggatgcagcagtggggtgcactggaaaacggaggcaaatgagggatgtcagaggtcac
aagcctccaccagagactgaaggtgttgactttcaccccccacaccctccagagtgtgat
ggggggtttgctctctcaggggctttgccctgggttcagtgctgggaaggtactccaaat
ggttccttaactgaaggcgcctacactctagagggaatgacagacaaaagaggcagatgt
cataaagggtga

>gi568815589f:97956809_98183037|GENSCAN_predicted_peptide_3|380_aa
MPLELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEF
KFNRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDELLER
LAGAKAQGWHSVLRDVCGVQLNDETSSWDVLGRVRTSKEKVLMVLVLDYSGRPMVISSGM
QSMDTMKQVYQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHET
GIAISVAAVALGAKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQ
LLPCEMACNEKLGKSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLVGKKVLVTV
EEDDTIMEELVDNHGKKIKS

>gi568815589f:97956809_98183037|GENSCAN_predicted_CDS_3|1143_bp
atgccgctggagctggagctgtgtcccgggcgctgggtgggcgggcaacacccgtgcttc
atcattgccgagatcggccagaaccaccagggcgacctggacgtagccaagcgcatgatc
cgcatggccaaggagtgtggggctgattgtgctaagttccagaagagtgagctagaattc
aagtttaatcggaaagccttggagaggccatacacctcgaagcattcctgggggaagacg
tacggggagcacaaacgacatctggagttcagccatgaccagtacagggagctgcagagg
tacgccgaggaggttgggatcttcttcactgcctctggcatggatgagctactggagagg
ctagcaggcgccaaagcccagggctggcacagtgttttaagagatgtctgtggagttcag
ttgaatgatgagaccagcagttgggatgtgttggggagagtcagaacctctaaagagaaa
gtgctgatggtgttggtgctggattactcaggtcgcccaatggtgatctccagtgggatg
cagtcaatggacaccatgaagcaagtttatcagatcgtgaagcccctcaaccccaacttc
tgcttcttgcagtgtaccagcgcatacccgctccagcctgaggacgtcaacctgcgggtc
atctcggaatatcagaagctctttcctgacattcccatagggtattctgggcatgaaaca
ggcatagcgatatctgtggccgcagtggctctgggggccaaggtgttggaacgtcacata
actttggacaagacctggaaggggagtgaccactcggcctcgctggagcctggagaactg
gccgagctggtgcggtcagtgcgtcttgtggagcgtgccctgggctccccaaccaagcag
ctgctgccctgtgagatggcctgcaatgagaagctgggcaagtctgtggtggccaaagtg
aaaattccggaaggcaccattctaacaatggacatgctcaccgtgaaggtgggtgagccc
aaaggctatcctcctgaagacatctttaatctagtgggcaagaaggtcctggtcactgtt
gaagaggatgacaccatcatggaagaattggtagataatcatggcaaaaaaatcaagtct
taa

>gi568815589f:97956809_98183037|GENSCAN_predicted_peptide_4|353_aa
MELSNGYSHGMGSPSSTLPTSFSVNNLAPANAESSKTWLKGKFTELRLLLDEEEALAKKF
IDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQM
SLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKPDARTP
TLDPDTMHARLRLSADRLTVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQ
EAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLD
RLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP

>gi568815589f:97956809_98183037|GENSCAN_predicted_CDS_4|1062_bp
atggagctgagcaatggctactcccatggcatgggatctcccagctccaccctgcccact
tccttcagtgttaacaacctggctcctgctaatgcagagtcaagtaaaacctggctgaag
gggaaattcactgaactcagattactacttgacgaagaggaagcgctggccaagaaattc
attgataaaaacacgcagcttaccctccaggtgtacagggaacaagctgactcttgcaga
gagcaacttgacatcatgaatgatctctccaacagggtctggagtatcagccaggagccc
gatcctgtccagaggcttcaggcatacacggccaccgagcaggagatgcagcagcagatg
agcctcggggagctgtgccatcccgtgcccctctcctttgagcccgtcaagagcttcttt
aagggcctcgtggaagccgtggagagtacattacagacgccattggacattcgccttaag
gaaagcataaactgccagctctcagacccttccagcaccaagccagacgcgcgcacgccc
acgctggatcctgacacgatgcacgcgcgcctgcgcctgtccgccgatcgcctgacggtg
cgctgcggcctgctgggcagcctggggcccgtgcccgtgctgcggttcgacgcgctctgg
caagtgctggctcgtgactgcttcgccaccggccgccactactgggaggttgacgtgcag
gaggcgggcgccggctggtgggtgggcgcggcctacgcctcccttcggcgccgcggggcc
tcggccgccgcccgcctgggctgcaaccgccagtcctggtgcctcaagcgctacgacctt
gagtactgggccttccacgacggccagcgcagccgcctgcggccccgcgacgacctcgac
cggctcggcgtcttcctggactacgaggccggcgtcctcgccttctacgacgtgacgggc
ggcatgagccacctgcataccttccgcgccacgttccaggagccgctctacccggccctg
cggctctgggagggggccatcagcatcccccggctgccctag

>gi568815589f:97956809_98183037|GENSCAN_predicted_peptide_5|128_aa
MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKASGHFFLIPMERPTFPPRQ
KGPPIWSQ

>gi568815589f:97956809_98183037|GENSCAN_predicted_CDS_5|387_bp
atggcgggcgcggcgaccgggagccggacccctgggaggtcggagcttgtcgagggatgc
ggctggcgctgcccggagcatggcgaccgcgtggctgagctcttctgtcgccgctgccgc
cgctgcgtgtgcgcgctttgcccggtgctgggcgcgcaccgtggccaccctgtgggcctg
gcgctggaggcagcggtgcacgtgcagaaactcagccaagaatgtttaaagcagctggca
atcaagaagcagcagcacattgacaacataacccagatagaagatgccaccgagaagctc
aaggcaagtggacatttcttcctcatacccatggaaagacccacatttccccccagacaa
aagggacccccaatatggagccaatga

>gi568815589f:97956809_98183037|GENSCAN_predicted_peptide_6|528_aa
MGRLVSITSCHRQVHSRHPQQLLKMSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVH
DNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDF
EIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYK
VMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQ
EASYKGHRASKVLFLGNLKKLMSTGTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFP
FYDADTSMLYVVGKGDGNIRYYEVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCE
IFRFYKLITTKSLIEPISMIVPRRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRERPIFN
SMAPASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPP
KTENELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL

>gi568815589f:97956809_98183037|GENSCAN_predicted_CDS_6|1587_bp
atgggacgtctggtgagcatcaccagctgccacagacaggtgcactcccgccacccccag
cagttgctcaagatgtcatggcacccccagtaccggagctccaagttccgtcatgtcttt
ggcaaaccagccagcaaggagaactgctacgactccgtgcctatcacccgcagcgttcac
gacaaccacttctgtgccgtgaacccccacttcattgcagttgtgactgagtgtgctggt
ggaggggccttcctcgtcatccccctgcaccagacagggaagttggacccccactaccca
aaagtctgcgggcacagaggcaacgttttggatgtcaagtggaacccttttgatgatttt
gagatcgcctcctgttctgaagatgccacaattaagatctggagcatccccaagcagctg
ctgaccaggaacctcacggcctacaggaaggaactcgtgggccacgcgcgcagagtaggc
ctggtggagtggcaccccacggccgccaacatcctcttcagtgctggctatgactacaag
gtgatgatctggaacctggatacaaaggagtctgtcatcacaagccccatgagtacgatt
agctgtcaccaagatgtgatcctctccatgtccttcaacaccaacggcagcctgttggcc
accacctgcaaagaccgcaagattcgggttattgacccccgagcagggaccgtcctccag
gaggccagctacaaagggcaccgggccagcaaagtgctgtttctggggaacctgaagaag
ctgatgtccacaggcacatcccgatggaacaaccggcaggtggccttgtgggaccaggat
aacctctctgtgcctctgatggaggaggacctggacggctcctcgggcgtgctgtttccc
ttctatgacgcggacaccagcatgctctacgtggtggggaagggagatggcaacatccgc
tactacgaggtgagcgccgacaagcctcacctgagctacctgactgagtaccgctcctat
aacccacagaaggggatcggtgtcatgccaaagagaggactcgacgtgtcctcctgcgag
atcttccgcttctacaagctgatcacaaccaaaagcctcatcgagcccatctccatgatt
gtgccccggcggtcagaatcctaccaagaggacatataccctccaacagcaggggcccag
ccctccctgacggcccaggagtggctcagcgggatgaatcgagagagacctatcttcaat
tccatggccccagcctcaccccggctcttgaatcagacagaaaagctggctgcagaagat
ggctggaggtcttcctccctgttggaggagaagatgccaaggtgggcagcagaacacagg
ctggaggagaagaaaacctggctgacaaatggctttgacgttttcgaatgccccccacca
aagacagagaatgagttgctgcagatgttctaccggcaacaggaggagatccgaaggctc
cgggagctgttgacccagcgagaggtccaggccaaacagttggaactggagatcaaaaac
ttgcggatgggctcagagcagctctga
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com