Result of FASTA (ccds) for
pF1KB0999
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0999, 2450 aa
1>>>pF1KB0999 2450 - 2450 aa - 2450 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 15.9897+/-0.00119; mu= -21.1552+/- 0.072
mean_var=659.9692+/-134.340, 0's: 0 Z-trim(116.4): 54 B-trim: 44 in 1/54
Lambda= 0.049924
statistics sampled from 16965 (17005) to 16965 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.522), width: 16
Scan time: 10.240
The best scores are: opt bits E(32554)
CCDS41858.2 NCOR2 gene_id:9612|Hs108|chr12 (2514) 12442 913.0 0
CCDS41857.2 NCOR2 gene_id:9612|Hs108|chr12 (2458) 10933 804.3 0
CCDS55892.1 NCOR2 gene_id:9612|Hs108|chr12 (2504) 10933 804.3 0
CCDS11175.1 NCOR1 gene_id:9611|Hs108|chr17 (2440) 2868 223.4 1.1e-56
CCDS54095.1 NCOR1 gene_id:9611|Hs108|chr17 (2337) 2860 222.8 1.6e-56
CCDS54094.1 NCOR1 gene_id:9611|Hs108|chr17 ( 914) 2566 201.4 1.8e-50
>>CCDS41858.2 NCOR2 gene_id:9612|Hs108|chr12 (2514 aa)
initn: 10228 init1: 6903 opt: 12442 Z-score: 4857.7 bits: 913.0 E(32554): 0
Smith-Waterman score: 16081; 96.5% identity (96.5% similar) in 2493 aa overlap (1-2418:1-2482)
10 20 30 40 50 60
pF1KB0 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 PQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 SPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 REITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 REITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 AHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 LSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 KVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVEN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 SAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 NLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 AEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 EPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 GRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 LDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 GKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDP
:::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS41 GKSRSPAPPADKEA--------FAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDP
1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KB0 SAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQ
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KB0 LHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEA
1140 1150 1160 1170 1180 1190
1210 1220 1230 1240 1250 1260
pF1KB0 SVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSP
1200 1210 1220 1230 1240 1250
1270 1280 1290 1300 1310 1320
pF1KB0 SRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYD
1260 1270 1280 1290 1300 1310
1330 1340 1350 1360 1370 1380
pF1KB0 MMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLR
1320 1330 1340 1350 1360 1370
1390 1400 1410 1420 1430 1440
pF1KB0 REAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 REAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREE
1380 1390 1400 1410 1420 1430
1450 1460 1470 1480 1490 1500
pF1KB0 LRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDV
1440 1450 1460 1470 1480 1490
1510 1520 1530 1540 1550 1560
pF1KB0 MADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAG
1500 1510 1520 1530 1540 1550
1570 1580 1590 1600 1610 1620
pF1KB0 HLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYE
1560 1570 1580 1590 1600 1610
1630 1640 1650 1660 1670 1680
pF1KB0 HLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRG
1620 1630 1640 1650 1660 1670
1690 1700 1710 1720 1730 1740
pF1KB0 YPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGII
1680 1690 1700 1710 1720 1730
1750 1760 1770 1780 1790 1800
pF1KB0 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS
1740 1750 1760 1770 1780 1790
1810 1820 1830 1840 1850 1860
pF1KB0 SSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSGSSGGGGGSSSRPA
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS41 SSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSG---GGGGSSSRPA
1800 1810 1820 1830 1840
1870 1880 1890 1900 1910 1920
pF1KB0 SHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAAT
1850 1860 1870 1880 1890 1900
1930 1940 1950 1960 1970 1980
pF1KB0 FPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPA
1910 1920 1930 1940 1950 1960
1990 2000 2010 2020 2030 2040
pF1KB0 SSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFS
1970 1980 1990 2000 2010 2020
2050 2060 2070 2080 2090 2100
pF1KB0 IQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPG
2030 2040 2050 2060 2070 2080
2110 2120 2130 2140 2150 2160
pF1KB0 PVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHP
2090 2100 2110 2120 2130 2140
2170 2180 2190 2200 2210 2220
pF1KB0 QQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKT
2150 2160 2170 2180 2190 2200
2230 2240 2250 2260 2270 2280
pF1KB0 SVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFF
2210 2220 2230 2240 2250 2260
2290 2300 2310 2320 2330
pF1KB0 SKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTG---------
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTGLMTYRSQAV
2270 2280 2290 2300 2310 2320
pF1KB0 ------------------------------------------------------------
CCDS41 QEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPLNASASLPAAMPITAADGRSDH
2330 2340 2350 2360 2370 2380
2340 2350 2360 2370 2380
pF1KB0 ------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWED
2390 2400 2410 2420 2430 2440
2390 2400 2410 2420 2430 2440
pF1KB0 RPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYET
:::::::::::::::::::::::::::::::::
CCDS41 RPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYET
2450 2460 2470 2480 2490 2500
2450
pF1KB0 LSDSE
CCDS41 LSDSE
2510
>>CCDS41857.2 NCOR2 gene_id:9612|Hs108|chr12 (2458 aa)
initn: 8383 init1: 7544 opt: 10933 Z-score: 4270.5 bits: 804.3 E(32554): 0
Smith-Waterman score: 16306; 97.9% identity (97.9% similar) in 2479 aa overlap (1-2450:1-2458)
10 20 30 40 50 60
pF1KB0 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 PQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 SPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 REITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 REITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 AHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSG
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS41 RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQ-RVGQRGSG
310 320 330 340 350
370 380 390 400 410 420
pF1KB0 LSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPM
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB0 KVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYK
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB0 SLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVEN
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB0 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQ
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB0 SAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB0 NLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEE
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB0 AEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPP
::: ::::::::::::::::::::::::::::::::::::::::
CCDS41 AEA-----------------TVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPP
720 730 740 750 760
790 800 810 820 830 840
pF1KB0 EPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEG
770 780 790 800 810 820
850 860 870 880 890 900
pF1KB0 EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGS
830 840 850 860 870 880
910 920 930 940 950 960
pF1KB0 GRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKP
890 900 910 920 930 940
970 980 990 1000 1010 1020
pF1KB0 LDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR
950 960 970 980 990 1000
1030 1040 1050 1060 1070 1080
pF1KB0 GKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDP
1010 1020 1030 1040 1050 1060
1090 1100 1110 1120 1130 1140
pF1KB0 SAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQ
1070 1080 1090 1100 1110 1120
1150 1160 1170 1180 1190 1200
pF1KB0 LHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEA
1130 1140 1150 1160 1170 1180
1210 1220 1230 1240 1250 1260
pF1KB0 SVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSP
1190 1200 1210 1220 1230 1240
1270 1280 1290 1300 1310 1320
pF1KB0 SRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYD
1250 1260 1270 1280 1290 1300
1330 1340 1350 1360 1370 1380
pF1KB0 MMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLR
1310 1320 1330 1340 1350 1360
1390 1400 1410 1420 1430 1440
pF1KB0 REAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 REAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREE
1370 1380 1390 1400 1410 1420
1450 1460 1470 1480 1490 1500
pF1KB0 LRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDV
1430 1440 1450 1460 1470 1480
1510 1520 1530 1540 1550 1560
pF1KB0 MADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAG
1490 1500 1510 1520 1530 1540
1570 1580 1590 1600 1610 1620
pF1KB0 HLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYE
1550 1560 1570 1580 1590 1600
1630 1640 1650 1660 1670 1680
pF1KB0 HLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRG
1610 1620 1630 1640 1650 1660
1690 1700 1710 1720 1730 1740
pF1KB0 YPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGII
1670 1680 1690 1700 1710 1720
1750 1760 1770 1780 1790 1800
pF1KB0 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS
1730 1740 1750 1760 1770 1780
1810 1820 1830 1840 1850 1860
pF1KB0 SSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSGSSGGGGGSSSRPA
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS41 SSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSG---GGGGSSSRPA
1790 1800 1810 1820 1830
1870 1880 1890 1900 1910 1920
pF1KB0 SHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAAT
1840 1850 1860 1870 1880 1890
1930 1940 1950 1960 1970 1980
pF1KB0 FPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPA
1900 1910 1920 1930 1940 1950
1990 2000 2010 2020 2030 2040
pF1KB0 SSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFS
1960 1970 1980 1990 2000 2010
2050 2060 2070 2080 2090 2100
pF1KB0 IQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPG
2020 2030 2040 2050 2060 2070
2110 2120 2130 2140 2150 2160
pF1KB0 PVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHP
2080 2090 2100 2110 2120 2130
2170 2180 2190 2200 2210 2220
pF1KB0 QQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKT
2140 2150 2160 2170 2180 2190
2230 2240 2250 2260 2270 2280
pF1KB0 SVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFF
2200 2210 2220 2230 2240 2250
2290 2300 2310 2320 2330
pF1KB0 SKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTG---------
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTGLMTYRSQAV
2260 2270 2280 2290 2300 2310
2340 2350 2360 2370
pF1KB0 --------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGD
::::::::::::::::::::::::::::::::::::::::
CCDS41 QEHASTNMGLEAIIRKALMGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGD
2320 2330 2340 2350 2360 2370
2380 2390 2400 2410 2420 2430
pF1KB0 CNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAW
2380 2390 2400 2410 2420 2430
2440 2450
pF1KB0 DEEPKPLLCSQYETLSDSE
:::::::::::::::::::
CCDS41 DEEPKPLLCSQYETLSDSE
2440 2450
>>CCDS55892.1 NCOR2 gene_id:9612|Hs108|chr12 (2504 aa)
initn: 8389 init1: 7544 opt: 10933 Z-score: 4270.4 bits: 804.3 E(32554): 0
Smith-Waterman score: 15913; 96.1% identity (96.1% similar) in 2485 aa overlap (1-2410:1-2464)
10 20 30 40 50 60
pF1KB0 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 PQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 SPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 REITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 AHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSG
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS55 RYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQ-RVGQRGSG
310 320 330 340 350
370 380 390 400 410 420
pF1KB0 LSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPM
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB0 KVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYK
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB0 SLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVEN
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB0 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQ
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB0 SAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB0 NLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEE
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB0 AEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPP
::: ::::::::::::::::::::::::::::::::::::::::
CCDS55 AEA-----------------TVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPP
720 730 740 750 760
790 800 810 820 830 840
pF1KB0 EPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEG
770 780 790 800 810 820
850 860 870 880 890 900
pF1KB0 EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGS
830 840 850 860 870 880
910 920 930 940 950 960
pF1KB0 GRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKP
890 900 910 920 930 940
970 980 990 1000 1010 1020
pF1KB0 LDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR
950 960 970 980 990 1000
1030 1040 1050 1060 1070 1080
pF1KB0 GKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDP
1010 1020 1030 1040 1050 1060
1090 1100 1110 1120 1130 1140
pF1KB0 SAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQ
1070 1080 1090 1100 1110 1120
1150 1160 1170 1180 1190 1200
pF1KB0 LHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEA
1130 1140 1150 1160 1170 1180
1210 1220 1230 1240 1250 1260
pF1KB0 SVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSP
1190 1200 1210 1220 1230 1240
1270 1280 1290 1300 1310 1320
pF1KB0 SRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYD
1250 1260 1270 1280 1290 1300
1330 1340 1350 1360 1370 1380
pF1KB0 MMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLR
1310 1320 1330 1340 1350 1360
1390 1400 1410 1420 1430 1440
pF1KB0 REAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREE
1370 1380 1390 1400 1410 1420
1450 1460 1470 1480 1490 1500
pF1KB0 LRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDV
1430 1440 1450 1460 1470 1480
1510 1520 1530 1540 1550 1560
pF1KB0 MADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAG
1490 1500 1510 1520 1530 1540
1570 1580 1590 1600 1610 1620
pF1KB0 HLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYE
1550 1560 1570 1580 1590 1600
1630 1640 1650 1660 1670 1680
pF1KB0 HLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRG
1610 1620 1630 1640 1650 1660
1690 1700 1710 1720 1730 1740
pF1KB0 YPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGII
1670 1680 1690 1700 1710 1720
1750 1760 1770 1780 1790 1800
pF1KB0 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS
1730 1740 1750 1760 1770 1780
1810 1820 1830 1840 1850 1860
pF1KB0 SSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSGSSGGGGGSSSRPA
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS55 SSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGS---SGGGGGSSSRPA
1790 1800 1810 1820 1830
1870 1880 1890 1900 1910 1920
pF1KB0 SHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAAT
1840 1850 1860 1870 1880 1890
1930 1940 1950 1960 1970 1980
pF1KB0 FPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPA
1900 1910 1920 1930 1940 1950
1990 2000 2010 2020 2030 2040
pF1KB0 SSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFS
1960 1970 1980 1990 2000 2010
2050 2060 2070 2080 2090 2100
pF1KB0 IQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPG
2020 2030 2040 2050 2060 2070
2110 2120 2130 2140 2150 2160
pF1KB0 PVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHP
2080 2090 2100 2110 2120 2130
2170 2180 2190 2200 2210 2220
pF1KB0 QQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKT
2140 2150 2160 2170 2180 2190
2230 2240 2250 2260 2270 2280
pF1KB0 SVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFF
2200 2210 2220 2230 2240 2250
2290 2300 2310 2320 2330
pF1KB0 SKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTG---------
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTGLMTYRSQAV
2260 2270 2280 2290 2300 2310
pF1KB0 ------------------------------------------------------------
CCDS55 QEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPLNASASLPAAMPITAADGRSDH
2320 2330 2340 2350 2360 2370
2340 2350 2360 2370 2380
pF1KB0 ------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWED
2380 2390 2400 2410 2420 2430
2390 2400 2410 2420 2430 2440
pF1KB0 RPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYET
:::::::::::::::::::::::::
CCDS55 RPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYET
2440 2450 2460 2470 2480 2490
>>CCDS11175.1 NCOR1 gene_id:9611|Hs108|chr17 (2440 aa)
initn: 2280 init1: 1139 opt: 2868 Z-score: 1131.1 bits: 223.4 E(32554): 1.1e-56
Smith-Waterman score: 5071; 40.7% identity (61.4% similar) in 2660 aa overlap (1-2450:1-2439)
10 20 30 40 50
pF1KB0 MSGSTQPVAQTWRATEP-RYPPHSLSYPVQIARTHTDVGLLEYQ--HHSRDYASHLSPGS
::.: : : .:: ::::::..: .: . . .. .:. : . ::.: .
CCDS11 MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYRSSHLEVSQASQLLQQQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 IIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPD--
: ::::::::::.::..: :: : . . : . . . .:::::::: . :
CCDS11 QQQQLRRRPSLLSEFHPGSDRPQER--RTSYEPFHPGPSPVDHDSLESKRPRLEQVSDSH
70 80 90 100 110
120 130 140 150 160
pF1KB0 ---------PLLRPSPLLATGQPAGSEDLTKDRSLTGKLE-PVSPPSPPHTDPELELVPP
::..: : : : : : :: .. :: : : :: : . . :
CCDS11 FQRVSAAVLPLVHPLP---EGLRA-SADAKKDPAFGGKHEAPSSPISGQPCGDDQNASPS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB0 RLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRS
.::::::::.::::::::. ::::: :::::::::::::::::::::::::::.:.::::
CCDS11 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRS
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB0 LVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFK
.::::::::::::: ::.:.:::::.::::::::::::. :::::: ::.:::::::.::
CCDS11 IVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFK
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB0 RRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRE
:::::::: :::.:::::::::::::::.::::::::.:::::.::::::::::::::::
CCDS11 RRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQRE
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB0 LQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQ
:::.: ::::::.::: . ::::::.:::::::::::: :::::::.:::::..::.:.
CCDS11 QQERFQ-RVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQR
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB0 RIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAE
:.::::::::: :::::::::: ::.:...::: :..::.:::::::::::.::::.: .
CCDS11 RVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPD
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB0 CVLYYYLTKKNENYKSLVRRSY-RRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKE
:::::::::::::::.::::.: .:::..:: . .:... ..... .. . :: :.:
CCDS11 CVLYYYLTKKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEED--KAEKTEKKEEE
480 490 500 510 520 530
530 540 550 560 570 580
pF1KB0 KEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITR
:. : ::.:.. :: :: :.: : :. :...:.: .. .:::::::::::::::::
CCDS11 KKDEEEKDEKEDSKENTKE---KDKIDGTA-EETEEREQATPRGRKTANSQGRRKGRITR
540 550 560 570 580
590 600 610 620 630
pF1KB0 SMANEAN---------SEEAITP-QQSAELASMELNESSRWTEEEMETAKKGLLEHGRNW
::.::: .:: : : : : :.:::::::::.:::::.::::::
CCDS11 SMTNEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNW
590 600 610 620 630 640
640 650 660 670 680 690
pF1KB0 SAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEA
.:::.:::.:. .::::::::::.:.:::..::::: : .. .: .. ..:: .
CCDS11 AAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKTSRKPREERDVSQCESVASTVS
650 660 670 680 690 700
700 710 720 730 740 750
pF1KB0 AFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSP
: :::..::: :::: :..:. .. .: ..: .... ..:: :.
CCDS11 A----QEDEDIEAS----NEEENPEDSEVEAVKPSE------DSPENATSRGNTE--PAV
710 720 730 740 750
760 770 780 790 800 810
pF1KB0 HTEAAKDTGQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPS
. : . .: .:. .:.. : : : :: . : .... .: :
CCDS11 ELEPTTET---APSTSPSLAV------PSTKPAED---ESVETQVNDSISAETAEQMD--
760 770 780 790
820 830 840 850 860 870
pF1KB0 PSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGP
: .:.. :: .. : :::.. .::. : : . . ..:
CCDS11 ------VDQQEHSAEEGSVCDP--------PPATKADSVDV---EVRVPENHASKVEGDN
800 810 820 830 840
880 890 900 910 920 930
pF1KB0 AKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDK
.: .: . : .: . .. .. .:. .:.:::::::::: ..: ..
CCDS11 TKERDLDRASEKVE----PRDEDLVVAQQINAQRPEPQSDNDSSATCSADEDVDGEP-ER
850 860 870 880 890
940 950 960 970 980 990
pF1KB0 NRL--LSPRPSLLTPTGDPRANASPQKP--LDLKQLKQRAAAIPPIQVTKVHEPPREDAA
.:. .. .::::.:::. .. :: :: ::: ::..:::.:::. : : .
CCDS11 QRMFPMDSKPSLLNPTGSILVS-SPLKPNPLDLPQLQHRAAVIPPM----VSCTPCN---
900 910 920 930 940
1000 1010 1020 1030 1040 1050
pF1KB0 PTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKL
: . : . . :. ..:. : : ..
CCDS11 ----IPIGTPVSGYALYQRHIKAMHESALLEEQRQRQEQIDLECRS--------------
950 960 970 980
1060 1070 1080 1090 1100 1110
pF1KB0 PGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTI
. :: :: : ::.. .:: .... : : :: :.::. : :: :
CCDS11 -STSPCGTS--KSPNREWEVLQPAPH----QVITNLPEGVRLP-----TTRPTRPPPPLI
990 1000 1010 1020 1030
1120 1130 1140 1150 1160
pF1KB0 SNPPPLISSAKHPSVLERQIGAISQG-----MSVQLHVPYSEHAKAP-VGPVTMGLPLPM
. ..: : :: . . :.:::: .. . .. :.... : :: ...::: .
CCDS11 PSSKTTVASEK-PSFI--MGGSISQGTPGTYLTSHNQASYTQETPKPSVGSISLGLPRQQ
1040 1050 1060 1070 1080 1090
1170 1180 1190 1200 1210 1220
pF1KB0 DPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTR
. : : . .:::..:::.: . ::.: : ::. .:.:::: :.. ::::.: :...
CCDS11 ESAKSATLPYIKQEEFSPRSQNSQPEGLLV-RAQHEGVVRGTA-GAIQEGSITRGTPTSK
1100 1110 1120 1130 1140 1150
1230 1240 1250 1260 1270
pF1KB0 VPSDSAITYRGSITHGTPA--------DVLYKGTITRIIGEDSPSRLDRGREDSLPKGHV
. .: . :::::.:::: ..: ::.:.:. ::: ..:::.. ::::
CCDS11 ISVESIPSLRGSITQGTPALPQTGIPTEALVKGSISRMPIEDSSP--EKGREEAASKGHV
1160 1170 1180 1190 1200 1210
1280 1290 1300 1310 1320 1330
pF1KB0 IYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAIS-----
:::::.::.:::.. . ..: : : :: . ::.:. .:: . ...:
CCDS11 IYEGKSGHILSYDN----IKNARE-GTRSPRTAHEISL-KRSYESVEGNIKQGMSMRESP
1220 1230 1240 1250 1260
1340 1350 1360 1370 1380
pF1KB0 -SASIEGLMGRAIPPERHSPHH-LKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKRE
:: .:::. ::.: : ::: :::. . ::: :: ::. .:. :: :. : .:::
CCDS11 VSAPLEGLICRALP--RGSPHSDLKERTVLSGSIMQGTPRATTESFEDGLKYP-KQIKRE
1270 1280 1290 1300 1310 1320
1390 1400 1410 1420 1430 1440
pF1KB0 GTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREEL-----RHT
. :: : . : : :: ..: ..:.:: :::::::::... :.:
CCDS11 S-----PPIRAFEGAIT-------KGKP-YDG-ITTIKEMGRSIHEIPRQDILTQESRKT
1330 1340 1350 1360
1450 1460 1470 1480 1490 1500
pF1KB0 PELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMADA
::. . ::. ::::.::::.:.:.. : .. ::.:.::: .:.. . ::... .
CCDS11 PEVVQSTRPIIEGSISQGTPIKFDNN-SGQSAIKHNVKSLITGPSKLSRGMPPLEIVPEN
1370 1380 1390 1400 1410 1420
1510 1520 1530 1540 1550
pF1KB0 -RALERACYE-----ESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGA--
...::. :: :...:: .. ::: :. :.. . : : . :: :.: .:
CCDS11 IKVVERGKYEDVKAGETVRSRHTSVVSSGPSVLRST---LHEAPKAQLSPGIYDDTSARR
1430 1440 1450 1460 1470 1480
1560 1570 1580 1590 1600 1610
pF1KB0 -P--FAGHLPRGSPVTTREPTPRLQEGSLSSSKAS-QDRKLTSTPREIAKSP-HSTVPEH
: . . . ::::. .: .. ..::.:.. ..:: : :: . . : .: ::
CCDS11 TPVSYQNTMSRGSPMMNRT-----SDVTISSNKSTNHERKSTLTPTQRESIPAKSPVPGV
1490 1500 1510 1520 1530
1620 1630 1640 1650 1660
pF1KB0 HP---HPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLD-AAAAYYLPRHLAPNP
: : ::.. :: .. ..::::.: .:: ..: :: ::::: . :.:.:.:
CCDS11 DPVVSH--SPFDPHHRGSTAGEVYRSHLPTHLDP-AMPFHRALDPAAAAYLFQRQLSPTP
1540 1550 1560 1570 1580 1590
1670 1680 1690 1700 1710 1720
pF1KB0 TYPHLYPPYLIRGYPDTAALEN-RQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRES
:: : : :.:: ::::.:::::::::. : : :. :::::::.
CCDS11 GYPSQYQLY---------AMENTRQTILNDYITSQQMQVNL------RPDVARGLSPREQ
1600 1610 1620 1630 1640
1730 1740 1750 1760 1770 1780
pF1KB0 SLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSR-HSSSPL
:.: : : ::::::...: .::: :: . :::..:.: . : : ..:. .
CCDS11 PLGLPYPA-TRGIIDLTNMPPT-ILVPHPGGTSTPPMDRITYIPGTQITFPPRPYNSASM
1650 1660 1670 1680 1690
1790 1800 1810 1820 1830 1840
pF1KB0 SPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGS
::: ::::. ...:.::::.:.::..:.::: : .... . :::.::
CCDS11 SPGHPTHLA---AAASAEREREREREKERERER---IAAASSDL----YLRPGSEQP---
1700 1710 1720 1730 1740
1850 1860 1870 1880 1890 1900
pF1KB0 SGSSGGGGGSSSRPASHSHAHQHSPISPRTQDA-LQQRPSVLHNTGMKGIITAVEPSTPT
.::.::..... :: : :::.. :::::::...:. ..:: ..:..
CCDS11 -----------GRPGSHGYVRSPSP-SVRTQETMLQQRPSVFQGTNGTSVITPLDPTAQL
1750 1760 1770 1780 1790
1910 1920 1930 1940 1950
pF1KB0 VLRSTSTSSPV----RPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKE----APRVARP
. ...: ::. . :. :.. .:.. . . : :: : :. .
CCDS11 RIMPLPAGGPSISQGLPASRYNTAADA-LAALVDAAASAPQMDVSKTKESKHEAARLEEN
1800 1810 1820 1830 1840 1850
1960 1970 1980 1990
pF1KB0 ERPR--ADTGHAFLAKPP----ARS--GLEPASS-PSKGSEPRPLV-----------PPV
: : : . . : . :: : .:. :: .:. : ::
CCDS11 LRSRSAAVSEQQQLEQKTLEVEKRSVQCLYTSSAFPSGKPQPHSSVVYSEAGKDKGPPPK
1860 1870 1880 1890 1900 1910
2000 2010 2020 2030 2040 2050
pF1KB0 SGHATIARTPAKNLAPHHASPDPPAPPASASDPH-REK-TQSKPFSIQELELRSLGYHGS
: . :: .:. : ::: ::. .::. : ::. :
CCDS11 SRYEEELRTRGKTTITAANFIDVIITRQIASDKDARERGSQSSDSS------SSLSSHRY
1920 1930 1940 1950 1960
2060 2070 2080 2090 2100 2110
pF1KB0 SYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHL
...: .::.:::. ..: . : . .. :.. . :: : :
CCDS11 ETPSDAIEVISPASSPAPPQEKLQTYQPEVVKANQAENDPTRQYEGP---------LHHY
1970 1980 1990 2000 2010
2120 2130 2140 2150 2160
pF1KB0 RPLPESQPSSSPLLQTAPGVKGH--------QRVVTLAQHISEVITQDYTRHHPQQLSAP
:: .: : :: : :. ... .:..:::.:: ..::::..:.. .. . :
CCDS11 RP---QQESPSPQQQLPPSSQAEGMGQVPRTHRLITLADHICQIITQDFARNQVSSQT-P
2020 2030 2040 2050 2060 2070
2170 2180 2190 2200 2210
pF1KB0 LPAPLYSF---PGA--SCPVLDLRRPPSDLYLPPPD-----HGAP-ARGSPH-----SEG
: .: :.: : :: : :. : : . : : .: ::. :.:
CCDS11 QQPPTSTFQNSPSALVSTPV---RTKTSNRYSPESQAQSVHHQRPGSRVSPENLVDKSRG
2080 2090 2100 2110 2120 2130
2220 2230 2240 2250 2260 2270
pF1KB0 GKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSP
.. . :... : . . ::.:::. . : .. :: . : . .: ..::
CCDS11 SRPGKSPERSHV---SSEPYEPISPPQ--VPVVHEKQDSLLLLSQRGAEPAEQRNDARSP
2140 2150 2160 2170 2180
2280 2290 2300 2310 2320 2330
pF1KB0 GNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGT
:. : :.::.:: :..: ::::::::: .:::. . .. .. .::::::::.::.: .
CCDS11 GSISYLPSFFTKL-ENTSPMVKSKKQEIFRKLNSSGGGDSDMAAAQPGTEIFNLPAVTTS
2190 2200 2210 2220 2230 2240
pF1KB0 GG----------------------------------------------------------
:.
CCDS11 GSVSSRGHSFADPASNLGLEDIIRKALMGSFDDKVEDHGVVMSQPMGVVPGTANTSVVTS
2250 2260 2270 2280 2290 2300
2340 2350 2360 2370
pF1KB0 --------------GG--KAKVSGRPSSRKAKSPAPGLA--SGDRPPSVSSVHSEGDCNR
:: : :. .. .:::.::: :: . . .:: :::::::::: .:
CCDS11 GETRREEGDPSPHSGGVCKPKLISKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHR
2310 2320 2330 2340 2350 2360
2380 2390 2400 2410 2420 2430
pF1KB0 RTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSG-PLAGPHHA---
.:: . .:::::::.::: :::::: ::. . ..:: : : :. :.::.
CCDS11 QTP--GWAWEDRPSSTGSTQFPYNPLTMRMLS---STPPTPIACAPSAVNQAAPHQQNRI
2370 2380 2390 2400 2410
2440 2450
pF1KB0 WDEEPKPLLCSQYETLSDSE
:..:: ::: .::::::::.
CCDS11 WEREPAPLLSAQYETLSDSDD
2420 2430 2440
>>CCDS54095.1 NCOR1 gene_id:9611|Hs108|chr17 (2337 aa)
initn: 2271 init1: 1139 opt: 2860 Z-score: 1128.3 bits: 222.8 E(32554): 1.6e-56
Smith-Waterman score: 5036; 41.1% identity (60.9% similar) in 2625 aa overlap (1-2450:1-2336)
10 20 30 40 50
pF1KB0 MSGSTQPVAQTWRATEP-RYPPHSLSYPVQIARTHTDVGLLEYQ--HHSRDYASHLSPGS
::.: : : .:: ::::::..: .: . . .. .:. : . ::.: .
CCDS54 MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYRSSHLEVSQASQLLQQQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 IIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPD--
: ::::::::::.::..: :: : . . : . . . .:::::::: . :
CCDS54 QQQQLRRRPSLLSEFHPGSDRPQER--RTSYEPFHPGPSPVDHDSLESKRPRLEQVSDSH
70 80 90 100 110
120 130 140 150 160
pF1KB0 ---------PLLRPSPLLATGQPAGSEDLTKDRSLTGKLE-PVSPPSPPHTDPELELVPP
::..: : : : : : :: .. :: : : :: : . . :
CCDS54 FQRVSAAVLPLVHPLP---EGLRA-SADAKKDPAFGGKHEAPSSPISGQPCGDDQNASPS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB0 RLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRS
.::::::::.::::::::. ::::: :::::::::::::::::::::::::::.:.::::
CCDS54 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRS
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB0 LVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFK
.::::::::::::: ::.:.:::::.::::::::::::. :::::: ::.:::::::.::
CCDS54 IVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFK
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB0 RRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRE
:::::::: :::.:::::::::::::::.::::::::.:::::.::::::::::::::::
CCDS54 RRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQRE
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB0 LQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQ
:::.: ::::::.::: . ::::::.:::::::::::: :::::::.:::::..::.:.
CCDS54 QQERFQ-RVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQR
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB0 RIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAE
:.::::::::: :::::::::: ::.:...::: :..::.:::::::::::.::::.: .
CCDS54 RVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPD
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB0 CVLYYYLTKKNENYKSLVRRSY-RRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKE
:::::::::::::::.::::.: .:::..:: . .:... ..... .. . :: :.:
CCDS54 CVLYYYLTKKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEED--KAEKTEKKEEE
480 490 500 510 520 530
530 540 550 560 570 580
pF1KB0 KEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITR
:. : ::.:.. :: :: :.: : :. :...:.: .. .:::::::::::::::::
CCDS54 KKDEEEKDEKEDSKENTKE---KDKIDGTA-EETEEREQATPRGRKTANSQGRRKGRITR
540 550 560 570 580
590 600 610 620 630
pF1KB0 SMANEAN---------SEEAITP-QQSAELASMELNESSRWTEEEMETAKKGLLEHGRNW
::.::: .:: : : : : :.:::::::::.:::::.::::::
CCDS54 SMTNEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNW
590 600 610 620 630 640
640 650 660 670 680 690
pF1KB0 SAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEA
.:::.:::.:. .::::::::::.:.:::..::::: : .. .: .. ..:: .
CCDS54 AAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKTSRKPREERDVSQCESVASTVS
650 660 670 680 690 700
700 710 720 730 740 750
pF1KB0 AFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSP
: :::..::: :::: :..: : : ::::::: :::
CCDS54 A----QEDEDIEAS----NEEENPEDSE-----GAE-------------NSSDTESAPSP
710 720 730 740
760 770 780 790 800 810
pF1KB0 HTEAAKDTGQNGPKPPATLGADGPPPE-PPTPPPEDIPAPTEPTPASE-ATGAPTPPPAP
: ....:. .. : : : :: .:. .:... : . .
CCDS54 SPVEAVKPSEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAVPSTKPAEDESVETQVN
750 760 770 780 790 800
820 830 840 850 860 870
pF1KB0 PSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEE
: :: ...:..: ::: :: : . .:. .: : . . ..:
CCDS54 DSISAETAEQMDVDQQEHSA-----EEGSVCDPPPATK--ADSVDVEVRVPENHASKVEG
810 820 830 840 850
880 890 900 910 920 930
pF1KB0 GPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGG
.: .: . : .: . .. .. .:. .:.:::::::::: ..:
CCDS54 DNTKERDLDRASEKVE----PRDEDLVVAQQINAQRPEPQSDNDSSATCSADEDVDGEP-
860 870 880 890 900
940 950 960 970 980
pF1KB0 DKNRL--LSPRPSLLTPTGDPRANASPQKP--LDLKQLKQRAAAIPPIQVTKVHEPPRED
...:. .. .::::.:::. .. :: :: ::: ::..:::.:::. : : .
CCDS54 ERQRMFPMDSKPSLLNPTGSILVS-SPLKPNPLDLPQLQHRAAVIPPM----VSCTPCN-
910 920 930 940 950 960
990 1000 1010 1020 1030 1040
pF1KB0 AAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ
: . : . . :. ..:. : : ..
CCDS54 ------IPIGTPVSGYALYQRHIKAMHESALLEEQRQRQEQIDLECRS------------
970 980 990 1000
1050 1060 1070 1080 1090 1100
pF1KB0 KLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPP
. :: :: : ::.. .:: .... : : :: :.::. : ::
CCDS54 ---STSPCGTS--KSPNREWEVLQPAPH----QVITNLPEGVRLP-----TTRPTRPPPP
1010 1020 1030 1040 1050
1110 1120 1130 1140 1150 1160
pF1KB0 TISNPPPLISSAKHPSVLERQIGAISQG-----MSVQLHVPYSEHAKAP-VGPVTMGLPL
: . ..: : :: . . :.:::: .. . .. :.... : :: ...:::
CCDS54 LIPSSKTTVASEK-PSFI--MGGSISQGTPGTYLTSHNQASYTQETPKPSVGSISLGLPR
1060 1070 1080 1090 1100
1170 1180 1190 1200 1210 1220
pF1KB0 PMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPS
.. : : . .:::..:::.: . ::.: : ::. .:.:::: :.. ::::.: :.
CCDS54 QQESAKSATLPYIKQEEFSPRSQNSQPEGLLV-RAQHEGVVRGTA-GAIQEGSITRGTPT
1110 1120 1130 1140 1150 1160
1230 1240 1250 1260 1270
pF1KB0 TRVPSDSAITYRGSITHGTPA--------DVLYKGTITRIIGEDSPSRLDRGREDSLPKG
... .: . :::::.:::: ..: ::.:.:. ::: ..:::.. ::
CCDS54 SKISVESIPSLRGSITQGTPALPQTGIPTEALVKGSISRMPIEDSSP--EKGREEAASKG
1170 1180 1190 1200 1210 1220
1280 1290 1300 1310 1320 1330
pF1KB0 HVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAIS---
:::::::.::.:::.. . ..: : : :: . ::.:. .:: . ...:
CCDS54 HVIYEGKSGHILSYDN----IKNARE-GTRSPRTAHEISL-KRSYESVEGNIKQGMSMRE
1230 1240 1250 1260 1270
1340 1350 1360 1370 1380
pF1KB0 ---SASIEGLMGRAIPPERHSPHH-LKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLK
:: .:::. ::.: : ::: :::. . ::: :: ::. .:. :: :. : .:
CCDS54 SPVSAPLEGLICRALP--RGSPHSDLKERTVLSGSIMQGTPRATTESFEDGLKYP-KQIK
1280 1290 1300 1310 1320 1330
1390 1400 1410 1420 1430 1440
pF1KB0 REGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREEL-----R
::. :: : . : : :: ..: ..:.:: :::::::::... :
CCDS54 RES-----PPIRAFEGAIT-------KGKP-YDG-ITTIKEMGRSIHEIPRQDILTQESR
1340 1350 1360 1370 1380
1450 1460 1470 1480 1490 1500
pF1KB0 HTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMA
.:::. . ::. ::::.::::.:.:.. : .. ::.:.::: .:.. . ::...
CCDS54 KTPEVVQSTRPIIEGSISQGTPIKFDNN-SGQSAIKHNVKSLITGPSKLSRGMPPLEIVP
1390 1400 1410 1420 1430 1440
1510 1520 1530 1540 1550
pF1KB0 DA-RALERACYE-----ESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGA
. ...::. :: :...:: .. ::: :. :.. . : : . :: :.: .:
CCDS54 ENIKVVERGKYEDVKAGETVRSRHTSVVSSGPSVLRST---LHEAPKAQLSPGIYDDTSA
1450 1460 1470 1480 1490
1560 1570 1580 1590 1600
pF1KB0 ---P--FAGHLPRGSPVTTREPTPRLQEGSLSSSKAS-QDRKLTSTPREIAKSP-HSTVP
: . . . ::::. .: .. ..::.:.. ..:: : :: . . : .: ::
CCDS54 RRTPVSYQNTMSRGSPMMNRT-----SDVTISSNKSTNHERKSTLTPTQRESIPAKSPVP
1500 1510 1520 1530 1540 1550
1610 1620 1630 1640 1650 1660
pF1KB0 EHHP---HPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLD-AAAAYYLPRHLAP
: : ::.. :: .. ..::::.: .:: ..: :: ::::: . :.:.:
CCDS54 GVDPVVSH--SPFDPHHRGSTAGEVYRSHLPTHLDP-AMPFHRALDPAAAAYLFQRQLSP
1560 1570 1580 1590 1600
1670 1680 1690 1700 1710 1720
pF1KB0 NPTYPHLYPPYLIRGYPDTAALEN-RQTIINDYITSQQMHHNAATAMAQRADMLRGLSPR
.: :: : : :.:: ::::.:::::::::. : : :. ::::::
CCDS54 TPGYPSQYQLY---------AMENTRQTILNDYITSQQMQVNL------RPDVARGLSPR
1610 1620 1630 1640 1650
1730 1740 1750 1760 1770 1780
pF1KB0 ESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSR-HSSS
:. :.: : : ::::::...: .::: :: . :::..:.: . : : ..:.
CCDS54 EQPLGLPYPA-TRGIIDLTNMPPT-ILVPHPGGTSTPPMDRITYIPGTQITFPPRPYNSA
1660 1670 1680 1690 1700 1710
1790 1800 1810 1820 1830 1840
pF1KB0 PLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSS
.::: ::::. ...:.::::.:.::..:.::: : .... . :::.::
CCDS54 SMSPGHPTHLA---AAASAEREREREREKERERER---IAAASSDL----YLRPGSEQ--
1720 1730 1740 1750 1760
1850 1860 1870 1880 1890 1900
pF1KB0 GSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDA-LQQRPSVLHNTGMKGIITAVEPST
.::.::..... :: : :::.. :::::::...:. ..:: ..:..
CCDS54 ------------PGRPGSHGYVRSPSP-SVRTQETMLQQRPSVFQGTNGTSVITPLDPTA
1770 1780 1790 1800
1910 1920 1930 1940 1950 1960
pF1KB0 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD
:: . : : :: :.. . :: : .
CCDS54 Q--LR-------IMPL---------PAGG------PSISQG--LPAS----------RYN
1810 1820 1830
1970 1980 1990 2000 2010 2020
pF1KB0 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASP-DPPA
:. :: .. : . :: .: .:.: .::. : . :: . ::
CCDS54 TAADALAALVDAAASAPQMDVSKTKE-------ISSHRY--ETPSD--AIEVISPASSPA
1840 1850 1860 1870 1880
2030 2040 2050 2060 2070 2080
pF1KB0 PPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKH
:: .:: :. :.:: :. . ..:. .. : :
CCDS54 PP-------QEKLQT-------------------YQPEVVKANQAENDPTRQYEG--PLH
1890 1900 1910
2090 2100 2110 2120 2130 2140
pF1KB0 LEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVV
: ::.: .: . .:: : :: . . .: . : :..
CCDS54 -------HY----RPQQESP----SPQQQLP-----PSSQAEG---MGQVP--RTH-RLI
1920 1930 1940
2150 2160 2170 2180 2190
pF1KB0 TLAQHISEVITQDYTRHHPQQLSAPLPAPLYSF---PGA--SCPVLDLRRPPSDLYLPPP
:::.:: ..::::..:.. .. . : : .: :.: : :: : :. : :
CCDS54 TLADHICQIITQDFARNQVSSQT-PQQPPTSTFQNSPSALVSTPV---RTKTSNRYSPES
1950 1960 1970 1980 1990 2000
2200 2210 2220 2230 2240
pF1KB0 D-----HGAP-ARGSPH-----SEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHS
. : : .: ::. :.:.. . :... : . . ::.:::. . :
CCDS54 QAQSVHHQRPGSRVSPENLVDKSRGSRPGKSPERSHV---SSEPYEPISPPQ--VPVVHE
2010 2020 2030 2040 2050
2250 2260 2270 2280 2290 2300
pF1KB0 RSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTH
.. :: . : . .: ..:::. : :.::.:: :..: ::::::::: .:::.
CCDS54 KQDSLLLLSQRGAEPAEQRNDARSPGSISYLPSFFTKL-ENTSPMVKSKKQEIFRKLNSS
2060 2070 2080 2090 2100 2110
2310 2320 2330
pF1KB0 NRNEPEYNISQPGTEIFNMPAITGTGG---------------------------------
. .. .. .::::::::.::.: .:.
CCDS54 GGGDSDMAAAQPGTEIFNLPAVTTSGSVSSRGHSFADPASNLGLEDIIRKALMGSFDDKV
2120 2130 2140 2150 2160 2170
2340 2350
pF1KB0 ---------------------------------------GG--KAKVSGRPSSRKAKSPA
:: : :. .. .:::.:::
CCDS54 EDHGVVMSQPMGVVPGTANTSVVTSGETRREEGDPSPHSGGVCKPKLISKSNSRKSKSPI
2180 2190 2200 2210 2220 2230
2360 2370 2380 2390 2400
pF1KB0 PGLA--SGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVM
:: . . .:: :::::::::: .:.:: . .:::::::.::: :::::: ::. .
CCDS54 PGQGYLGTERPSSVSSVHSEGDYHRQTP--GWAWEDRPSSTGSTQFPYNPLTMRMLS---
2240 2250 2260 2270 2280 2290
2410 2420 2430 2440 2450
pF1KB0 ASPPPPGLPAGSG-PLAGPHHA---WDEEPKPLLCSQYETLSDSE
..:: : : :. :.::. :..:: ::: .::::::::.
CCDS54 STPPTPIACAPSAVNQAAPHQQNRIWEREPAPLLSAQYETLSDSDD
2300 2310 2320 2330
>>CCDS54094.1 NCOR1 gene_id:9611|Hs108|chr17 (914 aa)
initn: 1665 init1: 1139 opt: 2566 Z-score: 1019.7 bits: 201.4 E(32554): 1.8e-50
Smith-Waterman score: 2780; 52.9% identity (71.1% similar) in 918 aa overlap (137-1026:36-907)
110 120 130 140 150 160
pF1KB0 RPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLE-PVSPPSPPHTDPELELVPP
.: .. :: : : :: : . . :
CCDS54 YPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQDPAFGGKHEAPSSPISGQPCGDDQNASPS
10 20 30 40 50 60
170 180 190 200 210 220
pF1KB0 RLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRS
.::::::::.::::::::. ::::: :::::::::::::::::::::::::::.:.::::
CCDS54 KLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRS
70 80 90 100 110 120
230 240 250 260 270 280
pF1KB0 LVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFK
.::::::::::::: ::.:.:::::.::::::::::::. :::::: ::.:::::::.::
CCDS54 IVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFK
130 140 150 160 170 180
290 300 310 320 330 340
pF1KB0 RRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRE
:::::::: :::.:::::::::::::::.::::::::.:::::.::::::::::::::::
CCDS54 RRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQRE
190 200 210 220 230 240
350 360 370 380 390 400
pF1KB0 LQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQ
:::.: ::::::.::: . ::::::.:::::::::::: :::::::.:::::..::.:.
CCDS54 QQERFQ-RVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQR
250 260 270 280 290 300
410 420 430 440 450 460
pF1KB0 RIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAE
:.::::::::: :::::::::: ::.:...::: :..::.:::::::::::.::::.: .
CCDS54 RVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPD
310 320 330 340 350 360
470 480 490 500 510 520
pF1KB0 CVLYYYLTKKNENYKSLVRRSY-RRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKE
:::::::::::::::.::::.: .:::..:: . .:... ..... .. . :: :.:
CCDS54 CVLYYYLTKKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEED--KAEKTEKKEEE
370 380 390 400 410 420
530 540 550 560 570 580
pF1KB0 KEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITR
:. : ::.:.. :: :: :.: : :. :...:.: .. .:::::::::::::::::
CCDS54 KKDEEEKDEKEDSKENTKE---KDKIDGTA-EETEEREQATPRGRKTANSQGRRKGRITR
430 440 450 460 470
590 600 610 620 630
pF1KB0 SMANEAN---------SEEAITP-QQSAELASMELNESSRWTEEEMETAKKGLLEHGRNW
::.::: .:: : : : : :.:::::::::.:::::.::::::
CCDS54 SMTNEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNW
480 490 500 510 520 530
640 650 660 670 680 690
pF1KB0 SAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEA
.:::.:::.:. .::::::::::.:.:::..::::: : .. .: .. ..:: .
CCDS54 AAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKTSRKPREERDVSQCESVASTVS
540 550 560 570 580 590
700 710 720 730 740 750
pF1KB0 AFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSP
: :::..::: :::: :..: : : ::::::: :::
CCDS54 A----QEDEDIEAS----NEEENPEDSE-----GAE-------------NSSDTESAPSP
600 610 620 630
760 770 780 790 800 810
pF1KB0 HTEAAKDTGQNGPKPPATLGADGPPPE-PPTPPPEDIPAPTEPTPASE-ATGAPTPPPAP
: ....:. .. : : : :: .:. .:... : . .
CCDS54 SPVEAVKPSEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAVPSTKPAEDESVETQVN
640 650 660 670 680 690
820 830 840 850 860 870
pF1KB0 PSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEE
: :: ...:..: ::: :: : . .:. .: : . . ..:
CCDS54 DSISAETAEQMDVDQQEHSA-----EEGSVCDPPPATK--ADSVDVEVRVPENHASKVEG
700 710 720 730 740
880 890 900 910 920 930
pF1KB0 GPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGG
.: .: . : .: . .. .. .:. .:.:::::::::: ..:
CCDS54 DNTKERDLDRASEKVE----PRDEDLVVAQQINAQRPEPQSDNDSSATCSADEDVDGEP-
750 760 770 780 790 800
940 950 960 970 980
pF1KB0 DKNRL--LSPRPSLLTPTGDPRANASPQKP--LDLKQLKQRAAAIPP-IQVTKVHEP---
...:. .. .::::.:::. .. :: :: ::: ::..:::.::: .. : . :
CCDS54 ERQRMFPMDSKPSLLNPTGSILVS-SPLKPNPLDLPQLQHRAAVIPPMVSCTPCNIPIGT
810 820 830 840 850
990 1000 1010 1020 1030
pF1KB0 PREDAAPTKPAPPAPPPPQNLQPESDAPQQ------PGSSPRGKSRSPAPPADKEAEKPV
: : . : :. . . .: ..:: : :.::
CCDS54 PVSGYALYQRHIKAMHESALLEEQRQRQEQIDLECRSSTSPCGTSKSPNREWEGR
860 870 880 890 900 910
1040 1050 1060 1070 1080 1090
pF1KB0 FFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHD
2450 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:41:27 2016 done: Sat Nov 5 01:41:29 2016
Total Scan time: 10.240 Total Display time: 1.350
Function used was FASTA [36.3.4 Apr, 2011]