GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:22:20

Sequence gi568815595f:93964435_94226487 : 262053 bp : 37.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  15896  16048  153  1  0   69   96   141 0.549  12.35
 1.02 Intr +  32813  32867   55  1  1   65   90    73 0.423   2.83
 1.03 Term +  39225  39478  254  1  2   58   42   263 0.846  13.52
 1.04 PlyA +  40750  40755    6                               1.05

 2.02 PlyA -  41305  41300    6                               1.05
 2.01 Sngl -  50835  49951  885  0  0   71   43   491 0.862  38.70
 2.00 Prom -  61333  61294   40                              -5.15

 3.00 Prom +  62042  62081   40                              -6.55
 3.01 Init +  68744  68781   38  1  2   74   75    38 0.969   0.63
 3.02 Intr +  70897  71002  106  1  1   75   64   111 0.996   6.70
 3.03 Intr +  72118  72320  203  0  2   67  115   279 0.988  25.66
 3.04 Intr +  75446  75554  109  2  1   27   64   125 0.457   3.37
 3.05 Intr +  78581  78806  226  1  1   36   90   128 0.387   4.44
 3.06 Intr +  84972  85088  117  1  0   60  105   109 0.431   9.32
 3.07 Term +  88753  88829   77  2  2   86   41    50 0.694  -2.88
 3.08 PlyA +  89015  89020    6                               1.05

 4.02 PlyA -  89527  89522    6                               1.05
 4.01 Sngl -  97077  96514  564  0  0   50   34   490 0.582  35.69
 4.00 Prom - 102709 102670   40                              -7.45

 5.03 PlyA - 104213 104208    6                               1.05
 5.02 Term - 104774 104692   83  0  2   58   53   112 0.569   1.58
 5.01 Init - 109442 109202  241  2  1   71   61   156 0.845   9.28
 5.00 Prom - 109496 109457   40                              -7.05

 6.05 PlyA - 109613 109608    6                               1.05
 6.04 Term - 110402 109648  755  0  2   63   48   179 0.350   4.01
 6.03 Intr - 111715 111481  235  1  1   -5   -9   215 0.431  -1.16
 6.02 Intr - 112576 111896  681  1  0   26   73   550 0.780  38.15
 6.01 Init - 114250 113504  747  1  0   44   54   372 0.772  24.16
 6.00 Prom - 114504 114465   40                             -12.72

 7.03 PlyA - 114554 114549    6                               1.05
 7.02 Term - 115810 115283  528  1  0   55   41   334 0.913  18.67
 7.01 Init - 118000 117854  147  1  0   51   64    98 0.834   3.84
 7.00 Prom - 121005 120966   40                              -2.75

 8.00 Prom + 126832 126871   40                              -5.35
 8.01 Init + 129226 129283   58  0  1   68   82   100 0.954   8.92
 8.02 Intr + 129706 129860  155  2  2   79   75    31 0.951  -0.23
 8.03 Intr + 130599 130720  122  2  2  113  116    56 0.933   9.27
 8.04 Term + 161777 162056  280  2  1   73   44   149 0.280   2.93
 8.05 PlyA + 163816 163821    6                               1.05

 9.00 Prom + 174185 174224   40                              -6.35
 9.01 Init + 180251 180431  181  1  1   60   94    66 0.426   3.79
 9.02 Intr + 198937 199110  174  2  0   60   79    85 0.017   3.79
 9.03 Term + 215171 215253   83  0  2   81   42    85 0.017   0.08
 9.04 PlyA + 215782 215787    6                               1.05

10.03 PlyA - 217117 217112    6                               1.05
10.02 Term - 231463 231335  129  1  0  118   49    52 0.681   1.50
10.01 Init - 240938 240894   45  2  0   93   75    67 0.509   6.63
10.00 Prom - 243507 243468   40                              -6.35

11.03 PlyA - 243556 243551    6                               1.05
11.02 Term - 249985 249875  111  1  0   75   42    71 0.519  -1.22
11.01 Init - 251529 251470   60  0  0   69   66    96 0.855   6.80
11.00 Prom - 259124 259085   40                              -3.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +   9201   9518  318  2  0   65   44   202 0.821   9.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_1|153_aa
GRLGVPEAPGEERGAGVRSGLGWEVVGGATRDVQSDGQLLRLVQAVAGACQSMEKLSSAK
LVPGAADLKEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIF
VVDSSDEERMEETKEAMSEMLRHPRISGKPILV

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_1|462_bp
gggcgtctcggagtgccggaggcccccggggaagagcggggtgccggtgtccgctccggg
ctcggatgggaagtggtgggaggagcgacccgggatgttcagtctgatggccagttgctg
cggctggttcaagcggtggcgggagcctgtcagtccatggaaaaattgtcttctgcaaaa
ctggtccctggtgctgctgatctaaaggaataccctgaagatgtagctcctactgttgga
ttttcaaaaattaaccttagacaaggaaagtttgaagtcaccatctttgacttgggaggt
ggaataagaattcggggaatctggaagaattactatgctgaatcctatggggtaatattt
gttgtggattccagtgatgaagagagaatggaagagacaaaagaggctatgtcagaaatg
ctaagacatcctaggatatcgggaaagcctatattggtgtaa

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_2|294_aa
MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
INNLADNVQKFGQQQKSLVASMRRFSLLKRESTITKEIKIQAEYINRSLNDLVKEVKKSE
VENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSEE
DVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLLV
EEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_2|885_bp
atgaaagaccgacttcaagaactaaagcagagaacaaaggaaattgaactctctagagac
agtcatgtatcaactacagaaacagaggaacaaggggtgtttctacagcaagctgttatt
tatgaaagagagcctgtagctgagagacacctacatgaaatccaaaaactacaggaaagt
attaacaatttggcagataatgttcaaaaatttgggcagcaacagaaaagtctggtggct
tcaatgagaaggtttagtctacttaagagagagtctaccattacaaaggagataaaaatt
caggcagaatacatcaacagaagtttgaatgatttagttaaagaagttaaaaagtcagag
gttgaaaatggtccatcttcagtggtcacaaggatacttaaatctcagcatgctgcaatg
ttccgccattttcagcaaatcatgtttatatacaatgacacaatagcagcaaagcaagag
aagtgcaagacatttattttacgtcagcttgaagttgctggaaaagagatgtctgaagaa
gatgtaaatgatatgcttcatcaaggaaaatgggaagtttttaatgaaagcttacttaca
gaaatcaatatcactaaagcacaactttcagagattgaacagagacacaaggaacttgtt
aatttggagaaccaaataaaggatttaagggatcttttcattcagatatctcttttagta
gaggaacaaggagagagcatcaacaatattgaaatgacagtgaatagtacaaaagagtat
gttaacaatactaaagagaaatttggactagctgtaaaatacaaaaaaagaaatccttgc
agagtactgtgttgttggtgctgtccatgctgtagctcaaaataa

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_3|291_aa
MECGLIDIGDLDRLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKK
IDKSIKKGLYWLLHVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREERKQNE
QEQAELDGTSGLAELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCHLKHKME
HEQIETQGQVNHNGQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKKKTKKLRMK
RNHRVEPLNIDDCAPESPTPPPPPPPDFYRKPLPPLAVPQRPNSDAHDVIS

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_3|876_bp
atggagtgtggattaatagacattggagacttggacaggttggcaaataaacaagataaa
gaaggagctttaggagaagctgatgtcattgaatgtctatctctggaaaaattggtcaat
gagcacaagtgcctgtgtcagatagaaccatgttcagcaatctcggggtatggaaagaaa
attgacaagtccattaaaaaaggcctttattggctgctacatgttattgcaagagacttt
gatgccttaaatgaacgcatccaaaaagagacaacagagcagcgtgctcttgaggaacaa
gagaaacaagaaagagctgaacgagtgcgaaaattacgagaagaaagaaaacaaaatgaa
caggagcaggctgaactcgatggaaccagtggtctggctgagttggacccagaaccaacg
aatcctttccagccaatagcatctgtaatcattgagaatgaaggaaaacttgaaagagag
aaaaaaaaccaaaaaatggagaaagacagtgatggctgccacctgaaacataaaatggag
catgagcaaatagagacacaaggccaggttaatcacaatggccaaaaaaataatgaattt
ggactagtagaaaattataaggaggcattaacacagcagttaaagaatgaagatgagaca
gaccggccatcattggaatcagctaatggtaaaaagaaaactaagaaactaagaatgaaa
aggaaccaccgggtagaaccacttaatatagatgactgtgctcctgagagtccaacgcca
cccccaccccctcctcctgatttctataggaagccactgcctcccctggctgtgccacag
cgacctaacagtgatgctcatgatgtgatctcataa

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_4|187_aa
MFLLLNCIVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFS
IPEKNRPLKDRINLVLSRELKEPPQGAHFLARSLDDALKLTERPELANKVDMIWIVGGSS
VYKEAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVLSDVQEGKHIKYKF
EVCEKDD

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_4|564_bp
atgtttcttttgctaaactgcatcgtcgctgtgtcccaaaacatgggcatcggcaagaac
ggggacctgcccaggccgccgctcaggaatgaattcaggtatttccagagaatgaccaca
acttcttcagtagagggtaaacagaatctggtgattatgggtaggaagacctggttctcc
attcctgagaagaatcgacctttaaaggatagaattaatttagttctcagcagagaactc
aaggaacctccacaaggagctcattttcttgccagaagtttggatgatgccttaaaactt
actgaacgaccagaattagcaaataaagtagacatgatttggatagttggtggcagttct
gtttataaggaagccatgaatcacctaggccatcttaaactatttgtgacaaggatcatg
caggactttgaaagtgacacgtttttttcagaaattgacttggagaaatataaacttctg
cctgaatacccaggtgttctctctgatgtccaggaggggaaacacatcaagtacaaattt
gaagtatgtgagaaggatgattaa

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_5|107_aa
MGKDFMSKTPKATAAKAKIDKWDLIKRKSFCTVKETTIRVNRQPTEWEKIFAIYPTDKGL
ISRIYKEFKQIYEKKTTSSKNRKSFAFLVEHQKAKNPEHKSPSYYGI

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_5|324_bp
atgggcaaagacttcatgtctaaaacaccaaaagcaacggcagcaaaagccaaaattgac
aaatgggatctaattaaacgaaagagcttctgcacagtaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcaatctatccaactgacaaagggcta
atatccagaatctacaaagaatttaaacaaatttacgagaaaaaaacaacctcatcaaaa
aataggaaatcctttgcgtttctggtggaacatcaaaaggctaaaaatcctgaacataag
agtccttcatactacgggatctga

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_6|805_aa
MVKGSMQQEELTILNIYAPNTGASRFMKQVLRDLQRDLDSHTIIVGDFNTPLSILDRSMR
QKINKDIQDLNSALDQADLIDIYRTLHPKSTEYTLFSASHHTYSKTDHIIGSKLLSKCKR
MEIITNSLSEHSEIKLELRIKKLTQNRTTTQKLNNLLLNDYWVNNEMQAEIKMFFETNEN
KDTTYQNLWDPFKAVCKGRFTALNAHKRKQERSKIDNLTSKLKELEKQQQTNSKASRRQE
ITKIRAELKTRRERFQHSSTCPGYTHTLDEQKHLVIASVQLPNDDAHFDASHYDSEKGEF
GGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIITTKTPSSDVLILDYTKHPKPDLSGD
CNSDLRLHGHQKKGYGLSWPNLSGHLLSASDDHTIYPWDISAVPKEGNVVDAKTIFTGHT
VVVEDVSWHLFHKSLFGSVADHQKLMIWDTCSNNTSKPSHSVDAHTAEVNCLSILIDLSK
IGEEQSPEDAEDGSPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY
NDEDPEGIWIQKDKVLEFLARAIRHEKEIKGIQIGREEVKLSLFADDMIVYLESPIVSAQ
NLLKLISNFSKISRNKINVQKSQAFLYTNNRQTDSQIMSELPSTIATKRIKYLGIQLTRD
VKDLFKENYKPLLEEIREDTNKWKILPCSWIRRINTVKMAILPRVTYRFNAIPIQLPLTF
FTELEKQNTLNFIWNQKRTHIAKTILRKKNKAGGIMLPDFKLYYKATVTKTAWNWYQNRY
IQPMEQNRALRNNTTHLQLSDLWQT

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_6|2418_bp
atggtaaagggatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaac
acaggagcatccagattcatgaagcaagttcttagagacctacaaagagacttagactcc
cacacaataatagtgggagactttaacaccccgctgtcaatattagacagatcaatgaga
cagaaaattaacaaggatattcaggacttgaactcagctctggaccaagcagacctaata
gacatctacagaactctccacccaaaatcaacagaatatacattattctcagcatctcat
cacacttattctaaaactgaccacataattggaagtaaactcctcagcaaatgtaaaaga
atggaaatcataacaaacagtctctcagaacacagtgaaatcaaattagaactcaggatt
aagaaactcactcaaaaccgcacaactacacagaaactgaacaacctgctcctgaatgac
tactgggtaaataatgaaatgcaggcagaaataaagatgttctttgaaaccaatgagaac
aaagacacaacataccagaatctctgggacccatttaaagcagtgtgtaaagggagattt
acagcactaaatgctcacaagagaaagcaggaaagatctaaaattgacaacctaacatca
aaattaaaagaactagagaagcaacagcaaacaaattcaaaagctagcagaagacaagaa
ataactaagatcagagcagaactgaagaccagaagggaaagatttcagcattcatcgact
tgtcctgggtacacacacacattggatgaacaaaaacatcttgttatagccagtgtgcaa
ctccctaatgatgatgctcattttgatgcatcacactacgacagtgagaaaggagaattt
ggaggttttggttcagttagtggaaaaattgaaatagaaatcaagatcaaccatgaagga
gaagtaaacagggcccgttatatgccccagaatccttgtattatcacaacaaagactcct
tccagtgatgttcttatcttggactatacaaaacatcctaaaccagatctttctggagac
tgcaactcagacttgcgtctccatggacatcagaaaaaaggctatgggctttcttggcca
aatctcagtgggcacttacttagtgcttcagatgatcacaccatctacccgtgggacatc
agtgctgttccaaaggagggaaatgtggtggatgcaaagaccatctttacagggcataca
gtagtagtagaagatgtttcctggcatctgttccataagtctctgtttgggtcagttgct
gatcatcagaaacttatgatttgggatacttgttcaaacaatacttccaaaccaagccac
tcagttgacgctcacactgctgaagtgaactgcctttcaatccttatagatttaagtaaa
attggagaggaacaatccccagaagatgcagaagacgggtcaccagagttgttgtttatt
catggtggtcacactgccaagatatctgatttctcctggaatcccaatgaaccttgggtg
atttgttctgtatcagaagacaatatcatgcaagtgtggcaaatggcagagaacatttat
aatgatgaagaccctgaaggaatatggatccagaaggacaaggtattggaatttctagcc
agggcaatcaggcacgagaaggaaataaagggtattcaaataggaagagaggaagtcaaa
ttgtctctgtttgcagatgacatgattgtatatttagaaagccccatcgtctcagcccaa
aatctccttaagctaataagcaacttcagcaaaatctcaaggaacaaaatcaatgtgcaa
aaatcacaagcattcctatataccaataacagacaaacagacagccaaatcatgagtgaa
ctcccatccacaattgctactaagagaataaaatacctgggaatacaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcgaggaaataagagaggacaca
aacaaatggaaaatacttccatgctcatggataagaagaatcaatacagtgaaaatggcc
atactgcccagagtaacttatagattcaatgctatccccatccagctaccattgactttc
ttcacagaattggaaaaacaaaatactttaaacttcatatggaatcaaaaaagaacccac
atagccaagacaatcctaaggaaaaagaacaaagctggaggcatcatgctacctgacttc
aaactatactacaaggctacagtaaccaaaacggcatggaactggtaccaaaacagatat
atacaaccaatggaacagaacagagccctcagaaataataccacacatctacaactatct
gatctttggcaaacctga

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_7|224_aa
MTTSFLKKEVRKLKCASRVCKTDCRDLARVSDSVGLKESLKFVALASFQPPLVIPRQTRS
GVDLQQTPADLQQRGPTVRRKTNKQKGIAHPLKDPTSQRSPTSKTKGDISTKMGRNQCKK
AENSKNQNASSPPKDHNSSPAREQNWMENEFDKLTEVGFRRWVITNSSKLKEHILTQCKE
AKNLEKSLDKLLTRITSLEKNINDLMELKNTARELREAYTSINS

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_7|675_bp
atgacaacctctttccttaagaaagaggttcgcaaacttaagtgtgcatcaagggtctgt
aaaacagactgcagggacctagccagagtttctgattcagtaggtctgaaagagagcctg
aaattcgtagctctagcaagttttcagcctccgctggtgatacccaggcaaacaaggtct
ggagtggacctccagcaaactccagcagacctgcagcagaggggcccaactgttagaagg
aaaactaacaaacagaaaggaatagcacatccactcaaagaccccaccagccaaaggtca
ccaacatcaaagaccaaaggggatatatccacaaagatggggagaaaccagtgcaaaaag
gctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcacaactcctcgccg
gcaagggaacaaaactggatggagaatgagtttgacaaactgacagaagtaggcttcaga
aggtgggttataacaaactcttccaagctaaaggagcatattctaacccaatgcaaggaa
gctaagaaccttgaaaaaagtttagacaaattgctaactagaataaccagtttagagaag
aacataaatgacctgatggagctgaaaaacacagcacgagaacttcgtgaagcatacaca
agtatcaatagctga

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_8|204_aa
MVPVGQEAFKPGQFLRLPQCYLHCNEYDSLRLRWLRQTLESFIPQPLINVIKVSELDGRK
MGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQRRNLPLLQIELLRSAIKALRP
GGILVYSTCTLSKAENQDVISEILNSHGNIMPMDIKGIARTCSHDFTFAPTGQECGLLVI
PDKGKAWGPMYVAKLKKSWSTGKW

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_8|615_bp
atggttcctgtgggacaggaagcttttaagccaggacagttcctgcgtctgccgcaatgt
tatcttcattgtaatgaatatgatagtctgagattgaggtggctaaggcagacgttggaa
tctttcatcccacagcctttgataaatgtaattaaagtgtctgaattggatggcagaaaa
atgggagatgcccagcctgaaatgtttgacaaggtgttagtggatgctccgtgttcaaat
gatcgaagctggttgttttcttctgactctcagaaggcatcctgtaggataagtcaaagg
aggaatttgcctcttctacagatagagctgttaaggtctgcaattaaggccttacgtcct
ggagggatacttgtatactctacatgcacgctttccaaggcagaaaatcaagatgtgatc
agtgaaattttaaactcccacggtaacatcatgcctatggacattaaaggaatagcaagg
acttgctcccacgacttcacatttgctcccactggccaggaatgtgggctcttagtgatt
ccagataagggcaaagcctggggcccaatgtatgtagccaaattgaagaaatcatggagc
acaggaaaatggtga

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_9|145_aa
MEKKQESAILAKERTNFKKEQSITRIKCYREVREKENNHSSKQIGFVNFGCSMVMRWYQR
AWLKKQQTTYETRDLMNPRNLISGVSCTATGLILMNAKRNLKPFVTQKPSLDTRVRDTVC
MMNASVLYLQGSRNIAKSKTPQTLR

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_9|438_bp
atggaaaagaagcaggagagtgccatacttgccaaggaaagaactaactttaagaaggag
cagtcgattactagaatcaagtgctacagagaggtcagagaaaaggagaacaatcatagc
agcaaacagattggatttgttaattttggatgctcaatggtaatgagatggtatcagaga
gcatggttaaagaaacaacaaacaacttatgagaccagagatcttatgaatccacgtaat
ttaatttctggggtgagctgcacagccacaggcttgatattaatgaatgcaaaaaggaac
ctgaaaccttttgttacacagaagccatctttggacaccagggtgagagacacagtgtgc
atgatgaatgccagtgtcttatatctgcagggaagtcggaatattgccaaatctaaaact
cctcaaactcttcggtaa

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_10|57_aa
MTITEDLDKNSLRGELIRMQCWLQPQKLNQEEGLTKDKKVARQQDPDSLLWATTPVK

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_10|174_bp
atgaccatcactgaggacctggacaagaacagtttaagaggagagctgatcagaatgcag
tgttggctacagcctcagaagttgaaccaggaggaggggctcactaaagacaagaaagtt
gcaagacagcaggacccagactccttattgtgggccaccacaccagtcaaatag

>gi568815595f:93964435_94226487|GENSCAN_predicted_peptide_11|56_aa
MQQEGPHQTPDVSDFQAFKTAPFQLHLLPTVQLGKTASSTMRTCFVNDHIKDAIPE

>gi568815595f:93964435_94226487|GENSCAN_predicted_CDS_11|171_bp
atgcagcaagaaggccctcatcagacaccagatgtcagtgacttccaagccttcaaaacc
gctccctttcaactacatctgcttcccacagtgcaacttggaaaaactgcctcatctacc
atgagaacatgctttgtcaatgaccatatcaaagatgctatacctgaatga