GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:46:51

Sequence gi568815596r:121124344_121385109 : 260766 bp : 47.43% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1037   1294  258  1  0  -86   55   551 0.978  29.95
 1.02 PlyA +   2976   2981    6                               1.05

 2.22 PlyA -   3971   3966    6                               1.05
 2.21 Term -   7972   7889   84  1  0  116   47    77 0.566   4.05
 2.20 Intr -  16381  16282  100  0  1   42   84    85 0.339   3.61
 2.19 Intr -  29376  29233  144  2  0   66   81   107 0.950   7.20
 2.18 Intr -  32105  31965  141  1  0  124   44    59 0.286   4.57
 2.17 Intr -  71606  71582   25  0  1  100   99    -4 0.074  -1.02
 2.16 Intr -  77910  77836   75  1  0   65  115    26 0.462   2.49
 2.15 Intr -  78299  78195  105  0  0   98   47    49 0.430   1.99
 2.14 Intr -  84712  84550  163  1  1   76   94    65 0.227   5.45
 2.13 Intr - 107625 107483  143  1  2   73   78   253 0.659  22.87
 2.12 Intr - 109851 109748  104  2  2   88  105   142 0.999  15.72
 2.11 Intr - 110968 110878   91  2  1   97   94   150 0.999  15.55
 2.10 Intr - 113373 113280   94  0  1   87   99    98 0.998  10.34
 2.09 Intr - 113507 113459   49  1  1  128  105    50 0.999   9.38
 2.08 Intr - 115306 115215   92  1  2  114   83   113 0.999  12.19
 2.07 Intr - 118126 118016  111  1  0   68   83   163 0.899  14.38
 2.06 Intr - 122627 122475  153  2  0  131   97   245 0.989  29.97
 2.05 Intr - 123927 123821  107  1  2   78   80    26 0.999   0.73
 2.04 Intr - 124744 124639  106  1  1   93  109   197 0.999  22.09
 2.03 Intr - 125304 125228   77  1  2   47  121    74 0.845   5.83
 2.02 Intr - 156928 156777  152  0  2  127   67   178 0.695  19.41
 2.01 Init - 160883 160705  179  2  2   28   91   282 0.995  19.23
 2.00 Prom - 164286 164247   40                              -6.56

 3.04 PlyA - 165674 165669    6                               1.05
 3.03 Term - 168746 168615  132  2  0  123   43    28 0.195  -0.11
 3.02 Intr - 172308 172222   87  0  0   97   53    34 0.484   0.97
 3.01 Init - 174538 174248  291  1  0   53   32   202 0.677   8.25
 3.00 Prom - 200271 200232   40                              -3.36

 4.09 PlyA - 200908 200903    6                               1.05
 4.08 Term - 216604 216518   87  1  0  123   39    64 0.558   2.66
 4.07 Intr - 222811 222695  117  1  0  101   95    74 0.995  10.06
 4.06 Intr - 224375 224169  207  2  0   36   96   306 0.927  25.47
 4.05 Intr - 228108 227776  333  0  0   36   69   135 0.527   2.17
 4.04 Intr - 238957 238829  129  1  0   94  105   137 0.998  16.89
 4.03 Intr - 240941 240751  191  0  2   65   49   332 0.999  26.30
 4.02 Intr - 243488 243245  244  2  1   28   24   283 0.430  12.97
 4.01 Init - 253305 253156  150  0  0   45   87   181 0.864  13.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:121124344_121385109|GENSCAN_predicted_peptide_1|85_aa
RKKKKEKEKKEKEKEKKKEDEEEKGKGKEKRKRKKEKEKKEGGEEEEEEEEEEEEEEEEE
EGEEEEEEEEKEEEEEEEEEEGGGG

>gi568815596r:121124344_121385109|GENSCAN_predicted_CDS_1|258_bp
aggaagaagaagaaggagaaggagaaaaaggagaaggagaaggagaaaaaaaaggaggac
gaggaggagaaggggaaggggaaggagaagaggaagaggaagaaggagaaggagaagaag
gaaggaggagaagaggaagaggaagaggaggaggaggaagaagaggaagaggaagaagaa
gaaggagaagaggaagaggaagaggaggagaaggaagaagaggaagaggaagaagaagaa
gaaggaggaggaggatga

>gi568815596r:121124344_121385109|GENSCAN_predicted_peptide_2|764_aa
MRRAGRHRGFGARSRRWVLGAPRVCACCRAPVGALGVPAMLFWHTQPEHYNQHNSGSYLR
DVLALPIFKQEEPQLSPENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLE
NRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGIL
DPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNEN
GEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWP
DVAYQVNSAPSPSYNGSPNSFGLGEGNASPTHPVEALPVGSDHLLPSASIQDAQQWLHRN
RFSQFCRLFASFSGADLLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQ
NRVPLQQKRDGSGDSNLSVYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIH
VVVSNELQLSPLLALLLPSGMWALGKEACPRVPADAALPLGCRGLLGSRVLPQYSGHLLS
DASNATLTVLPSGFHSSVLSFLPQGTLLTSSEPKWENPHDGFARWVLLHSFSDEEAEEKE
VFSSVKWNWLFSTREPFPFSWGWVKPELGSSGPRALHRDMMMIMMHEDDPKTVVTWTPSL
TSSNATCVNTVPLPSCPCAFEWTITGQSNDPRADLHKELAQSFWPWDKIWAGLLNDDRGV
AKSLIVVPFVSQPATRHLINAIQQGLLLFPTTDGIAACWELPPI

>gi568815596r:121124344_121385109|GENSCAN_predicted_CDS_2|2295_bp
atgcgccgagccggccggcaccgcgggttcggagcgcgaagccgccgctgggtcctcggc
gcgccccgcgtctgcgcttgctgccgcgccccggtcggcgcgctgggagttccagccatg
ctcttctggcacacgcagcccgagcactacaaccagcacaactccggcagctacctgcgt
gatgtgctcgctctgcccatcttcaagcaggaggaaccccagctgtcccccgagaacgag
gcccgcctgccacccctgcaatatgtgttgtgtgctgccacgtccccagccgtgaagctg
catgaagagacgctgacctacctcaaccaaggtcagtcttatgaaatccgactactggag
aatcggaagctgggagactttcaagatctgaacacaaaatatgtcaagagcatcatccgt
gtggtcttccatgaccgccggctgcagtatacggagcaccagcagctggagggctggcgg
tggagtcggccaggggaccggatcctggacatcgatattccactgtctgttggtatcttg
gaccccagggccagcccgacccagctgaatgcagtcgagtttttgtgggaccctgcgaag
agagcttctgcattcattcaggtacactgcatcagcacagaattcacccccaggaagcac
gggggcgagaagggagtgccctttcgagtccagattgacacgtttaagcagaacgagaat
ggggagtacacggagcacctgcactcagccagctgccagatcaaggtgttcaagccgaag
ggagccgatcggaaacagaagactgaccgggagaagatggagaaaagaactgcccaagag
aaggagaaataccagccgtcctatgaaaccaccatcctcacagagtgctctccatggccc
gacgtggcctaccaggtgaacagcgccccgtccccaagctacaatggttctccaaacagc
tttggcctcggcgaaggcaacgcctctccgacccacccggtggaggccctgcccgtgggc
agtgaccacctgctcccatcagcttcgatccaggatgcccagcagtggcttcaccgcaac
aggttctcgcagttctgccggctctttgccagcttctcaggtgctgacttgctgaagatg
tcccgagatgatttggtccagatctgtggtcccgcagatgggatccggctcttcaacgcc
atcaaaggccggaatgtgaggccaaagatgaccatttatgtctgtcaggagctggagcag
aatcgagtgcccctgcagcagaagcgggacggcagtggagacagcaacctgtctgtgtac
cacgccatcttcctggaagagctgaccaccttggagctgattgagaagatcgccaacctg
tacagcatctccccccagcacatccaccgagtctaccggcagggccccacgggcatccat
gtggtggtgagcaacgagctgcaactgtcccctctgctggccctgctgctgccctctgga
atgtgggccctaggaaaggaagcctgtccccgggtacctgcagatgcagctcttcctctg
ggctgccgtgggctgctgggctccagggttctgccccaatactcaggccacctcctctca
gatgcatccaatgccaccttgactgtgctgccttctggctttcattcttcagttctctcg
ttcctgcctcagggtaccctgctgacctcctccgagcccaagtgggaaaaccctcatgat
ggctttgcaaggtgggtgttattacactcattttcagatgaggaagcagaggagaaggaa
gtgttctcatctgtaaaatggaactggctctttagtacaagagagcctttcccattcagc
tggggctgggtcaagcctgaacttgggtcctcaggtcctcgtgcactacatagagacatg
atgatgatcatgatgcatgaagatgatcccaaaacagtagtgacatggaccccctcactg
acctcctccaatgccacctgtgtcaacaccgtccctttgccctcatgcccctgtgccttt
gagtggacaataaccggacagtccaacgaccccagagctgatcttcacaaggaattggcc
cagtctttctggccatgggacaaaatctgggctggcctgctgaatgatgacagaggagtg
gccaagtcactcattgttgtcccatttgtcagccagccagccaccagacatctcatcaac
gccatccagcagggtctccttctcttccccacgacggatggcattgccgcttgctgggag
ctccctccaatttaa

>gi568815596r:121124344_121385109|GENSCAN_predicted_peptide_3|169_aa
MLLTVGDASAIWQFGNVVDIACTHMKSLPKTKRASALKECRGGISGLEGNPGPTVKHSLQ
KCCNANAHQGPAHRLWCQTSNTGDSEYKRDPEDSAINAQKCLLLLSGLFSLPGPAVILEQ
SCGCAQDWKFPEASVDAKKKMLCFLYSLQNHEPIKPLFFINYLISGISL

>gi568815596r:121124344_121385109|GENSCAN_predicted_CDS_3|510_bp
atgcttctgacagttggtgatgcctctgccatttggcagtttggtaatgtggttgacatt
gcctgcacacacatgaaatctctgcctaagaccaagagagcatctgcattgaaagagtgc
agagggggcatcagcggcttggaaggaaatcctgggccaacggtgaagcactctcttcaa
aaatgctgcaacgccaatgctcatcagggcccagcgcaccgcctatggtgccaaaccagc
aacacaggcgattctgagtataaaagggatccagaagactctgcaataaatgctcagaag
tgcctgctcctgctctcaggcctcttctcactcccggggcctgctgtgattctggagcaa
agttgtggctgtgcccaggattggaagtttcctgaggcctcagtggacgccaagaagaag
atgttatgcttcctgtacagcctgcagaaccatgagccaattaaacctcttttctttata
aattacctaatctcaggtatttctttatag

>gi568815596r:121124344_121385109|GENSCAN_predicted_peptide_4|485_aa
MLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASP
ATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEA
VFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHF
KTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVT
CVERATFGRSLNWQEKEITVGFLQIGSFLYIGGMHGVNAVHVESDALAGKGKACSLRCPD
EAEAGQAGCAWPRALELEEGPQNTKEAFCTYPCSFLLPSNPGHPQEVHQVVRAAEEAAST
LASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGY
DNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSD
VSTHS

>gi568815596r:121124344_121385109|GENSCAN_predicted_CDS_4|1458_bp
atgctggactatgatacagagaacctgaactctgaagaaatctatagttctctacgtgga
gttacagaagccattgaaaagtttagttttcgaagccaagaagatctgaatgagccaatt
aaacgagatggcaaaaaggagtgtgatattgtgtcccgcgatgggggcgctgcctcccct
gccactgagggccgggggggtagtgaagtagaaggaggccggacagctctggataacaag
acctcactactcaacacccagcctccgcgcgccttcccggggccgcgggcgcgagactac
aacccgtacccctactcagatgccatcaacacctacgacaagaccgccctgaaagaggct
gtgttcgatgacgacatggagcagcttcgagacgtgcccatcgaccattctgacctggtg
gctgaccttctgaaagagctgtccaaccacaatgagcgagtggaggaacggaagggagcc
ctgctggagctgctcaagatcacgcgggaagacagccttggtgtctgggaggagcacttc
aagaccattctgctcctgctgctggagacccttggagacaaagaccattcaattcgagca
ctggcgttaagagttttgagggaaattctgagaaatcaaccagcaagatttaaaaactac
gccgagctgacgattatgaagactctggaagcccacaaagactcccataaggaggtgacc
tgtgtggaaagagctacctttggcaggagtttgaattggcaagaaaaagaaatcacagtg
ggcttccttcaaataggctccttcctgtacattggtggcatgcatggagtcaatgccgtc
catgttgagtccgacgctttggctggcaaggggaaggcctgctcactgaggtgcccggac
gaggcagaggcagggcaggccggctgtgcatggccgagggcccttgagctggaggaaggc
ccgcagaacaccaaagaagccttctgcacatatccatgctccttcctcctcccatctaat
cctggccacccacaagaagtgcatcaggtggtgagagcggctgaggaggctgcgtccaca
ctggccagttccatccacccggagcagtgcatcaaggtgctctgccccatcatccagacg
gccgactaccccatcaaccttgctgccatcaagatgcagaccaaagtcgtcgagaggatc
gcaaaggagtcattgctgcagctccttgtcgacatcatcccaggcttgctgcagggttat
gacaacaccgaaagtagtgtgcgtaaggccagcgtgttttgcttagtggcaatttattcc
gtaatcggagaagacctgaaacctcaccttgcacagctcacagggagcaagatgaagcta
ctaaacttatacataaagagggcccagaccaccaacagcaacagcagctcctcctccgat
gtctccacgcacagctaa