GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:13:38

Sequence gi568815576f:40757182_41026432 : 269251 bp : 43.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -   1103   1098    6                               1.05
 1.06 Term -  13800  13653  148  2  1  103   53   142 0.894   9.57
 1.05 Intr -  16838  16756   83  2  2   88  105    19 0.987   2.04
 1.04 Intr -  19954  19859   96  1  0  106   96    76 0.978  10.41
 1.03 Intr -  20192  20047  146  0  2   59   84    86 0.997   5.30
 1.02 Intr -  21944  21828  117  0  0   76  111    40 0.949   5.54
 1.01 Init -  27930  27861   70  0  1  110   77    52 0.993   7.51
 1.00 Prom -  30380  30341   40                              -8.36

 2.19 PlyA -  30754  30749    6                               1.05
 2.18 Term -  31982  31729  254  0  2   38   54   162 0.422   3.60
 2.17 Intr -  35495  35344  152  1  2   96   92    11 0.397   2.11
 2.16 Intr -  37399  37333   67  2  1   76   74    55 0.496   0.86
 2.15 Intr -  41902  41842   61  1  1   83  110    12 0.040   1.21
 2.14 Intr -  62096  62014   83  0  2   -5   69   122 0.016   0.36
 2.13 Intr -  69485  69368  118  2  1   95   38    79 0.215   3.64
 2.12 Intr -  70048  69915  134  2  2   87  110    48 0.722   7.26
 2.11 Intr -  72493  72445   49  1  1   63   76    15 0.717  -3.95
 2.10 Intr -  73775  73659  117  2  0   68   61   154 0.842  11.36
 2.09 Intr -  75490  75388  103  0  1   47   75    81 0.996   2.88
 2.08 Intr -  78489  78379  111  2  0   63   99   119 0.998   9.99
 2.07 Intr -  78706  78622   85  2  1   91   94    80 0.999   7.78
 2.06 Intr -  83511  83445   67  0  1   92  101    79 0.992   8.08
 2.05 Intr -  87758  87658  101  0  2   44  107   118 0.907   9.13
 2.04 Intr -  91188  91113   76  0  1   76   66   101 0.886   5.79
 2.03 Intr -  93699  93642   58  2  1   58  115    43 0.083   2.89
 2.02 Intr -  99448  99250  199  2  1   44   78   187 0.610  11.71
 2.01 Init - 104813 103946  868  2  1   75   83   456 0.556  38.53
 2.00 Prom - 106378 106339   40                              -2.46

 3.00 Prom + 115815 115854   40                              -3.16
 3.01 Init + 124055 124103   49  1  1   77   58    40 0.789  -0.99
 3.02 Intr + 124589 124996  408  0  0   89   87   176 0.189  11.84
 3.03 Intr + 129132 129334  203  1  2   53   80   216 0.152  16.30
 3.04 Intr + 150406 150468   63  0  0  122  100    61 0.784   9.61
 3.05 Intr + 151941 152054  114  2  0   78  102    54 0.986   6.44
 3.06 Intr + 157058 157143   86  1  2  113   91    34 0.975   4.82
 3.07 Intr + 165152 165332  181  2  1   96   75   116 0.975  10.97
 3.08 Intr + 167181 167301  121  2  1   99  107   -10 0.724   2.07
 3.09 Term + 169088 169254  167  0  2   95   43   182 0.979  12.48
 3.10 PlyA + 170302 170307    6                               1.05

 4.00 Prom + 187827 187866   40                              -2.46
 4.01 Init + 194218 194295   78  0  0   93   53   150 0.814  13.06
 4.02 Intr + 196374 196452   79  2  1   99   78    45 0.606   3.72
 4.03 Intr + 206866 206936   71  2  2  113   83   -23 0.203  -1.40
 4.04 Intr + 209156 209259  104  1  2  100   97    26 0.340   3.67
 4.05 Term + 209346 209463  118  0  1   92   38    29 0.317  -3.69
 4.06 PlyA + 210047 210052    6                               1.05

 5.07 PlyA - 211370 211365    6                               1.05
 5.06 Term - 220258 220060  199  0  1  116   47   107 0.674   6.27
 5.05 Intr - 239424 239313  112  1  1   73  110    20 0.398   2.14
 5.04 Intr - 246199 246162   38  0  2  105   86    49 0.358   4.31
 5.03 Intr - 252507 252413   95  0  2  102   49    56 0.227   1.86
 5.02 Intr - 254105 254045   61  1  1   81   38    60 0.045  -0.96
 5.01 Init - 268842 268835    8  0  2  114   91     0 0.111   3.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  93698  93642   57  2  0   75  115    45 0.907   7.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:40757182_41026432|GENSCAN_predicted_peptide_1|219_aa
MPGLTEFDQAKNNSQIGQPSEPEGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKG
IIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFII
GAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYK
GLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH

>gi568815576f:40757182_41026432|GENSCAN_predicted_CDS_1|660_bp
atgcctggcctaacagagtttgatcaagcaaagaacaattcgcaaattgggcagccctca
gaaccagaaggagtggttaatgtgttgctaacaactccactctgggtggtaaacaccaga
ctgaagcttcaaggagcaaaatttaggaatgaagacattgtaccaacaaactacaaaggt
atcattgatgcttttcatcagatcattcgcgatgaaggaatctcggctttatggaatggc
acatttccctcattgctgttggtcttcaatcctgccatccagttcatgttttatgaaggt
ttaaaacggcagcttttaaagaaacggatgaagctttcttccttggatgtgttcatcatt
ggtgcagtagccaaagcgattgccaccacggtgacctatcccctgcagacggtacagtca
attctgaggtttgggcgtcatagactaaacccagaaaacagaacattgggaagtcttcgg
aatattctctatcttcttcaccaacgagtaagacgttttggaataatgggactctacaaa
ggccttgaagccaaactgctgcagacagtcctcactgctgctctcatgttccttgtttat
gagaaactgacagctgccaccttcacagttatggggctgaagcgtgcacaccaacactga

>gi568815576f:40757182_41026432|GENSCAN_predicted_peptide_2|900_aa
MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDE
KRDIYDKYGTEGLNGGGSHFDDECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLL
NRPGSSYGNRNRDAGYFFSTASEYPIFEKFSSYDTGYTSQGSLGHEGLTSFSSLAFDNSG
MDNYISVTTSDKIVNGRNINTKKIIESDQEREAEDNGELTFFLVNSVANEEGFAKECSWR
TQSFNNYSPNSHSSKHVSQYTFVDNDEGGISWVTSNRDPPIFSAGVKEGAAPFCAVTPSQ
RLGLEPGRSPPSFAHHLPTMDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGK
VPPATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLGLIVIFSTLAEIDKEGVIEP
DTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILY
AKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKL
DYDEDASAMLKEVQPRAQKIAEHRRKYERKREEREIKERIERVKKAREEHERAQREEEAR
RQSGAQYGSFPGGFPGGMPGNFPGGMPGMGGGMPGMAGMPGLNEILSDPEVLAAMQDPEV
MVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGVWLGLRGAAPMASVLSYESLVHAVA
GAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSL
CCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAANFPEQVVDNLPADISSGIYYGWA
SAGSRDGQKMVVSIGWNPYYENTKKSMETHTMHTFKEHFYGEILSVAVVGYLRPEKNFDS

>gi568815576f:40757182_41026432|GENSCAN_predicted_CDS_2|2703_bp
atggtggattactatgaagttctaggactgcaaagatatgcttcacctgaggacattaaa
aaagcttatcataaagtggcacttaaatggcaccctgataaaaatccagaaaataaagaa
gaagcagagagaaaattcaaagaagtagctgaggcatacgaggtattatcaaatgatgag
aaacgggacatttatgataaatatggcacagaaggattaaacggaggtggaagtcatttt
gatgatgaatgtgagtacggcttcacattccataagccagatgatgtttttaaagaaatt
tttcatgaaagggatccattttcttttcacttctttgaagactcgcttgaggacctgtta
aatcgtccaggaagctcctatggaaacagaaacagagatgcaggatactttttctccact
gccagtgaatatccaatttttgagaaattttcttcatatgatacaggatatacatcacag
ggttcattggggcatgaaggccttacttctttctcttccctggcttttgataatagtggg
atggacaactacatatctgttacaacttcagacaaaatcgttaatggcagaaatattaat
acaaagaaaattattgaaagtgatcaagaaagagaagctgaagataatggagagttgaca
ttttttcttgtaaatagtgtggccaatgaagagggctttgcaaaagaatgcagctggaga
acacagtcattcaacaactattcaccaaattctcacagctccaaacatgtatctcaatat
actttcgtggacaatgatgagggaggtatatcttgggttaccagcaacagagatccccct
attttctcagcaggagtcaaagagggtgccgcccccttctgcgcggtcacgccgagccag
cgcctgggcctggaaccgggccgtagcccccccagtttcgcccaccacctccctaccatg
gacccccgcaaagtgaacgagcttcgggcctttgtgaaaatgtgtaagcaggatccgagc
gttctgcacaccgaggaaatgcgcttcctgagggagtgggtggagagcatgggtggtaaa
gtaccacctgctactcagaaagctaaatcagaagaaaataccaaggaagaaaaacctgat
agtaagaaggtggaggaagacttaaaggcagacgaaccatcaagtgaggaaagtgatcta
ggtcttattgtcattttctcgactttggcagaaattgataaagaaggtgtgattgaacca
gacactgatgctcctcaagaaatgggagatgaaaatgcggagataacggaggagatgatg
gatcaggcaaatgataaaaaagtggctgctattgaagccctaaatgatggtgaactccag
aaagccattgacttattcacagatgccatcaagctgaatcctcgcttggccattttgtat
gccaagagggccagtgtcttcgtcaaattacagaagccaaatgctgccatccgagactgt
gacagagccattgaaataaatcctgattcagctcagccttacaagtggcgggggaaagca
cacagacttctaggccactgggaagaagcagcccatgatcttgcccttgcctgtaaattg
gattatgatgaagatgctagtgcaatgctgaaagaagttcaacctagggcacagaaaatt
gcagaacatcggagaaagtatgagcgaaaacgtgaagagcgagagatcaaagaaagaata
gaacgagttaagaaggctcgagaagagcatgagagagcccagagggaggaagaagccaga
cgacagtcaggagctcagtatggctcttttccaggtggctttcctgggggaatgcctggt
aattttcccggaggaatgcctggaatgggagggggcatgcctggaatggctggaatgcct
ggactcaatgaaattcttagtgatccagaggttcttgcagccatgcaggatccagaagtt
atggtggctttccaggatgtggctcagaacccagcaaatatgtcaaaataccagagcaac
ccaaaggttatgaatctcatcagtaaattgtcagccaaatttggagtgtggctgggtctt
cgaggagccgcaccaatggcttccgtgctgtcctacgaaagcctggtccacgccgtggcc
ggagccgtgggaagcgtgacagcaatgacagtgttttttcccctggatacagctagactt
cgacttcaggttgatgagaaaagaaaatccaaaactacacacatggtgctcctggagatc
attaaagaagaaggactcctggcaccatatcgagggtggtttccagtgatttccagtctc
tgctgctccaattttgtctatttctacacttttaatagcctcaaagcactctgggtcaaa
ggtcaacattctaccactggaaaagatctggtagttgggtttgttgcagctaattttcct
gagcaagtggtagataatctgccagccgatatatccagtggcatttattatggttgggcc
agtgctggaagtagagatggtcagaagatggtggtgagcataggatggaacccatactat
gagaatacgaagaagtccatggaaacacataccatgcataccttcaaagagcacttctat
ggggaaatcctgagtgtggccgttgttggctacctcagaccagaaaagaactttgattca
tga

>gi568815576f:40757182_41026432|GENSCAN_predicted_peptide_3|463_aa
MRFYHVGRAGLELLTSGEVTPGLSQVEYALRRHKLMSLIQKEAQGQSGTDQTVVVLSNPT
YYMSNDIPYTFHQDNNFLYLCGFQEPDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWD
GPRSGTDGAIALTGVDEAYTLEEFQHLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTE
AKAKSKNKVRGVQQLIQRLRLIKSPAEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYA
KFEFECRARGADILAYPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDIT
RTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMKN
IKENNAFKAARKYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGIYIPEDDKDAP
EKFRGLGVRIEDDVVVTQDSPLILSADCPKEMNDIEQICSQAS

>gi568815576f:40757182_41026432|GENSCAN_predicted_CDS_3|1392_bp
atgaggttttaccatgttggccgggctggtcttgaactcctgacctcaggggaggtaact
ccaggactatctcaggtggaatatgcacttcgcagacacaaactaatgtctctgatccag
aaggaagctcaagggcagagtgggacagaccagacagtggttgtgctctccaaccctaca
tactacatgagcaacgatattccctatactttccaccaagacaacaatttcctgtaccta
tgtggattccaagagcctgatagcattcttgtccttcagagcctccctggcaaacaatta
ccatcacacaaagccatactttttgtgcctcggcgagatcccagtcgagaactttgggat
ggtccgcgatctggcactgatggagcaatagctctaactggagtagacgaagcctatacg
ctagaagaatttcaacatcttctaccaaaaatgaaagctgagacgaacatggtttggtat
gactggatgaggccctcacatgcacagcttcactctgactatatgcagcccctgactgag
gccaaagccaagagcaagaacaaggttcggggtgttcagcagctgatacagcgcctccgg
ctgatcaagtctcctgcagaaattgaacgaatgcagattgctgggaagctgacatcacag
gctttcatagaaaccatgttcaccagtaaagcccctgtggaagaagcctttctttatgct
aagtttgaatttgaatgccgggctcgtggcgcagacattttagcctatccacctgtggtg
gctggtggtaatcggtcaaacactttgcactatgtgaaaaataatcaactcatcaaggat
ggggaaatggtgcttctggatggaggttgtgagtcttcctgctatgtgagtgacatcaca
cgtacgtggccagtcaatggcaggttcaccgcacctcaggcagaactctatgaagccgtt
ctagagatccaaagagattgtttggccctctgcttccctgggacaagcttggagaacatc
tacagcatgatgctgaccctgataggacagaagcttaaagacttggggatcatgaagaac
attaaggaaaataatgccttcaaggctgctcgaaaatactgtcctcatcatgttggccac
tacctcgggatggatgtccatgacactccagacatgccccgttccctccctctgcagcct
gggatggtaatcacaattgagcccggcatttatattccagaggatgacaaagatgcccca
gagaagtttcggggtcttggtgtacgaattgaggatgatgtagtggtgactcaggactca
cctctcatcctttctgcagactgtcccaaagagatgaatgacattgaacagatatgcagc
caggcttcttga

>gi568815576f:40757182_41026432|GENSCAN_predicted_peptide_4|149_aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNRVVCSDLVGLYQDTVLLQSAQWVRWEREKLSNTLRELYKSQLKR
DLPKGCHSKRIFVLLGIPSVLAVDSTLSY

>gi568815576f:40757182_41026432|GENSCAN_predicted_CDS_4|450_bp
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagaatgtcaagctaaccag
gcgtccgctacttcagaagagtgtactgtcgcatggggagtctgtaaccgcgtggtatgc
tctgacttagttgggctctaccaggacaccgtactgctgcaaagtgctcagtgggtgagg
tgggagagggagaagctgtcgaatacccttcgtgagttatacaagagtcagctgaaaagg
gatcttccaaaaggctgtcactctaagagaatatttgtcctcttgggtatccctagtgta
ctagctgtggattccactcttagttactga

>gi568815576f:40757182_41026432|GENSCAN_predicted_peptide_5|170_aa
MPRCYEHGDKPDILPPDSLWSKGPLRGQLGPEPVPTPMASLFQACLPGEVQDAAGFSTWY
KKSGPEKDLFTWLFESWLLVNKLVLNPALHTTVFPCLGFARGPSRAPTTLEQVIVCPGDL
VWDSPPMSDDCLHQVSQLACHIPKEDFPAPLLEVATQFYSMTPQPSSLST

>gi568815576f:40757182_41026432|GENSCAN_predicted_CDS_5|513_bp
atgcccaggtgctacgaacatggtgataagcctgatatcttgcctccagacagcctgtgg
tctaagggacctttgcgaggtcagcttggccctgagcctgtgcccacacccatggcctcc
ctctttcaggcctgtttacctggtgaggtgcaggatgctgcagggttctccacctggtac
aagaagagtggcccagagaaagacctttttacttggctcttcgaaagctggctcttggtc
aacaaacttgtcctcaaccccgcccttcacaccacagtcttcccctgcctggggtttgct
cgggggcccagcagagctccaaccacactggagcaagtcatcgtctgccccggggacttg
gtctgggactccccacctatgtcagatgactgtcttcatcaagtctcacaacttgcctgt
catatccccaaagaggacttccctgcccctctgttagaagtggccacacagttttactct
atgacacctcaaccctcttcactgtctacgtga