GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:33:46

Sequence gi568815581r:20903034_21142835 : 239802 bp : 45.40% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16084  16601  518  0  2   58   57   197 0.013   7.96
 1.02 Term +  35039  35225  187  2  1   77   46   121 0.032   3.76
 1.03 PlyA +  36468  36473    6                               1.05

 2.30 PlyA -  37730  37725    6                               1.05
 2.29 Term -  48759  48646  114  0  0   54   40   174 0.978   7.77
 2.28 Intr -  73145  73004  142  1  1   68   39   128 0.185   6.26
 2.27 Intr -  76435  76239  197  1  2   91   46   114 0.155   5.71
 2.26 Intr -  86600  86417  184  1  1   88   94    13 0.002   1.69
 2.25 Intr -  88826  88755   72  1  0  133   16    73 0.003   3.12
 2.24 Intr -  94262  94232   31  0  1  111   67    36 0.063   0.99
 2.23 Intr -  99411  99259  153  1  0   89   61    41 0.049   1.54
 2.22 Intr -  99867  99626  242  2  2   65   50    84 0.064  -0.51
 2.21 Intr - 101318 101169  150  1  0   89   69   305 0.985  27.98
 2.20 Intr - 101957 101895   63  1  0  110  108    87 0.980  10.73
 2.19 Intr - 103954 103863   92  1  2  115   91   100 0.989  11.79
 2.18 Intr - 104963 104837  127  1  1   60  106    51 0.983   4.78
 2.17 Intr - 108276 108118  159  2  0  101   93   159 0.999  16.80
 2.16 Intr - 109902 109797  106  1  1   66  100   104 0.999   8.67
 2.15 Intr - 111953 111795  159  0  0   65   70    66 0.797   2.46
 2.14 Intr - 112866 112719  148  0  1   53   86   282 0.882  24.31
 2.13 Intr - 114518 114267  252  2  0   74   51    97 0.735   2.23
 2.12 Intr - 115078 114909  170  2  2   89   83   166 0.945  15.87
 2.11 Intr - 115886 115781  106  2  1  103   72    59 0.734   5.59
 2.10 Intr - 117829 117729  101  2  2   96   27    58 0.734   0.33
 2.09 Intr - 118193 118080  114  0  0  116   42   168 0.988  15.42
 2.08 Intr - 125671 125509  163  1  1   93   68   148 0.684  12.85
 2.07 Intr - 139786 139632  155  2  2   53   91   393 0.168  35.89
 2.06 Intr - 175840 175639  202  1  1    6   51   163 0.155   3.26
 2.05 Intr - 176652 176507  146  1  2    4   68   152 0.062   4.80
 2.04 Intr - 177081 176928  154  0  1   85   89    52 0.071   4.65
 2.03 Intr - 195960 195838  123  0  0   76   99    47 0.877   5.38
 2.02 Intr - 196782 196746   37  2  1  108   82    11 0.746   0.76
 2.01 Init - 201854 201787   68  2  2   67   58    60 0.619   1.44
 2.00 Prom - 204586 204547   40                              -6.86

 3.00 Prom + 207544 207583   40                              -2.86
 3.01 Init + 211051 211155  105  0  0   67   40    92 0.271   2.52
 3.02 Intr + 216788 216887  100  1  1   67   76    54 0.825   1.78
 3.03 Intr + 220330 220411   82  2  1   82   89    38 0.551   2.00
 3.04 Term + 223717 223831  115  1  1    7   55   125 0.351  -0.86
 3.05 PlyA + 226123 226128    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:20903034_21142835|GENSCAN_predicted_peptide_1|234_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKIDVQKSQAFLYTNNRQTESKIMNELPFKIAS
KRIKYLGIQLTRNVKDLFKENYKPLLNKIKEDTNKWKNIPCSWIGRINIMKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFVRNQKRARIAKIELFFIHPAFAIVASNTTCALGSHR
KRSHPDSPGLRCWKMEKPLPQEKSSMNTMKLGLHLGHPSPRLVYNAGALHTLPG

>gi568815581r:20903034_21142835|GENSCAN_predicted_CDS_1|705_bp
atgattgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcgatgtgcaaaaatcacaagcattcttatac
accaataacagacaaacagagagcaaaatcatgaatgaactcccattcaaaattgcttca
aagagaataaaatacctaggaattcaacttacaaggaatgtgaaggacctcttcaaggag
aactacaaaccactgctcaacaaaataaaagaggacacaaacaaatggaagaacattcca
tgctcatggataggaaggatcaatatcatgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaaactaccaatgactttcttcacagaattggagaaaact
actttaaagttcgtaaggaaccaaaaaagagcccgcattgccaagatagagctcttcttt
atacatcctgcttttgccatagttgcttctaataccacgtgcgccttgggctcccacagg
aagcggtcacatccagactcaccaggcctgagatgttggaagatggagaagcctttgcca
caggaaaaatcctccatgaacacaatgaaacttggcctgcacctgggacatccttctcca
cggctagtctacaatgcaggtgctctgcacacgctccctggctga

>gi568815581r:20903034_21142835|GENSCAN_predicted_peptide_2|1309_aa
MPNGKTGSRSYPRIYVALSSVQRFLALCGIGTVLLHLHHQFLDFMKGYALHLASFTQHHV
CDIRVMIIWVCTCIKLHCWVEVSTTELALVSGAQMWGSNLGRSAAGATVGECGPTLEDTR
VLLSNPCVWALVRSTLEPFHTDDKEEESEEEGEYNEVTEEVTEQVCLPAKAAKEGEGPKE
PYADFIVRLQESLKKVIADSAAQDIVLRLLAFNNANPECQAALRPIRGKAHLVDYIKACD
SIGEPEGEAMDAELAVAPPGCSHLGSFKVDNWKQNLRAIYQCFVWSGTAEARKRKRSLLL
FSEFQAKSCICHVCGVHLNRLHSCLYCVFFGCFTKKHIHEHAKAKRHNLAIDLMYGGIYC
FLCQDYIYDKDMEIIAKEEQRKAWKMQGPPWACSWAKGTTPALLKLSQGAPADVGLNECG
EGPAVGLGRRVMRSNSPALTAFSVCVGKGTQVDFGQGLRGLINLGNTCFMNCIVQALTHT
PLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEVSLSMPHQSLCPHELRAARWLFLWAAR
VAFLSTSVPGIRAWQRSEQGVHGCRLSPHRLRDLDMLLRAEAAQLPQLISRLVPVLQFYS
GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGLPKARAGVSDSAD
LWGAGASSLLISSQLMLMPLVQMPYSENPCAQVTGHLAACDDNGKKANNPNHCNCIIDQI
FTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTT
TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR
KITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHY
TSFIRQHKDQWFKCDDAIITKASIKDVLDSEGCGPSAPGTHRVGMDHTDGEAPGAALKMD
EMRGVLWVGGAAYTRHQNISCVMTWGCNGGLTAQSDRCLAFPSTRCGKAPTCCNSIKLHV
EASRGFLETGIFLSLSRSFFHKGEFHKCNTSKVNELLSLYRNLGLFSSPDSELRSLDLGF
NPGKQNRSVLLLPCEGTWETQMLPAPTPKPGQGAPRVSLESSQQNPRPVSSPDQHLKPFS
VQLGSLPLLSPRSPMCEQQPLPKEYGNQVFKDTCLPTLKLAGNQKSLLWENRPKGKDPEA
LTAGDSLQKMSKSLPDPTGAKLLHEKERKEEKEEKEKDEEEETQGWKKEKRGGQMRRGKR
MMEEEEKMLLVSRASAGEEHKKIKGVLAKDQEQEDLTSEEAMGPRHKGQ

>gi568815581r:20903034_21142835|GENSCAN_predicted_CDS_2|3930_bp
atgccaaacgggaagacaggttctcgatcctatccaaggatctacgtggcactgtcttca
gttcaaaggtttctggctctgtgtggaataggcactgtcctcctgcacctccatcaccag
ttcctggacttcatgaaggggtacgctttgcatctggcttctttcacccaacatcatgtc
tgtgatattcgagtaatgattatatgggtgtgcacatgtataaaactccactgctgggtt
gaggtctccacgaccgagctggccttggtaagtggcgcccaaatgtggggctcgaacctg
ggtcgaagtgctgccggagcaacggttggagaatgtggacctacactggaggacacccga
gtactcttaagcaatccctgtgtgtgggctctggttcgttccaccttggagccttttcac
acagatgacaaggaggaggaatcagaggaagaaggagagtataacgaagtaacagaagag
gtgacagagcaggtttgcttgccagctaaagcggcaaaggagggagagggaccaaaagaa
ccatatgcagattttatagttcggttacaggagtctcttaaaaaggtgattgcagattcg
gctgctcaggatatagtgttgcggttactagctttcaacaatgccaatcctgagtgccaa
gccgctctgcgacctattagagggaaagcacatttagttgattatattaaggcctgtgac
agtattggagagcccgagggcgaggccatggacgccgagctggcggtagcgccgccgggc
tgctcgcacctgggcagcttcaaggtggacaactggaagcagaacctgcgggccatctac
cagtgcttcgtgtggagcggcacggctgaggcccgcaagcgcaagcgttcactcctcctc
ttctctgaatttcaggccaagtcctgtatctgccatgtctgtggcgtccacctcaacagg
ctgcattcctgcctctactgtgtcttcttcggctgtttcacaaagaagcatattcacgag
catgcgaaggcgaagcggcacaacctggccattgatctgatgtacggaggcatctactgt
tttctgtgccaggactacatctatgacaaagacatggaaataatcgccaaggaggagcag
cgaaaagcttggaaaatgcaaggtcccccatgggcctgcagctgggccaagggaacaacc
ccagcattacttaagctctcccagggcgcacctgcagatgtggggctgaacgagtgtggc
gagggacctgcagtgggcttggggcgcagagtgatgcgtagcaacagccctgccctcaca
gccttcagcgtctgtgtgggtaaagggactcaagttgattttggccagggtctgcgtggg
ctgatcaaccttgggaacacatgcttcatgaactgcatcgtgcaggccctgacccacacg
ccacttctgcgggacttcttcctgtctgacaggcaccgctgtgagatgcagagccccagc
tcctgtctggtctgtgagatgtcctcactgtttcaggaggtctctctaagcatgccccat
cagagcctctgtcctcatgagctacgcgctgcacgttggctgttcctgtgggctgcacgt
gtggcgttcctgtccacttctgtccccggcatcagagcatggcagcgttcagagcaaggc
gttcacggctgccgcctcagccctcaccggctccgtgacctagacatgcttctcagagct
gaagcagctcagttacctcaactaataagcaggctggtgcctgttcttcagttttactct
ggacaccggtcccctcacatcccgtataagttgctgcacctggtgtggacccacgcgagg
cacctagcaggctacgagcagcaggacgcccacgagttcctcatcgcggccctggacgtg
ctccaccgacactgcaaaggtcttcctaaagcccgtgctggcgtttctgattcagcagat
ctgtggggggcaggggcttcttcactcttaatcagttcccagctgatgttgatgccgctg
gttcagatgccatactctgagaacccatgcgctcaggtcacagggcacctggctgcttgt
gatgacaatgggaagaaggccaacaaccccaaccactgcaactgcatcatagaccagatc
ttcacaggcgggttgcagtcagacgtcacctgccaagtctgccatggagtctccaccacc
atcgaccccttctgggacatcagcttggatctccccggctcttccaccccattctggccc
ctgagcccagggagcgagggcaacgtggtaaacggggaaagccacgtgtcgggaaccacc
acgctcacggactgcctgcgacgattcaccagaccagagcacttgggcagcagcgccaag
atcaagtgcagcggttgccatagctaccaggagtccacaaagcagctcactatgaagaaa
ctgcccatcgtagcctgttttcatctcaaacgatttgaacactcagccaagctgcggcgg
aagatcaccacgtatgtgtccttccccctggagctggacatgacccctttcatggcctcc
agcaaagagagcaggatgaatggacagtaccagcagcccacggacagtctcaacaatgac
aacaagtattccctgtttgctgttgttaaccatcaagggaccttggagagtggccactac
accagctttatccggcagcacaaagaccagtggttcaagtgtgacgatgccatcatcacc
aaggccagcatcaaggacgtcctggacagcgaaggatgtggcccctctgcacctgggacc
catcgggtcgggatggaccacacggacggggaggctcctggagctgctttgaagatggat
gagatgaggggtgtgctctgggtgggaggagcagcgtacacccgtcaccagaacatctct
tgtgtcatgacatgggggtgcaacgggggcctcacagcacagagtgaccgctgcctggcg
ttccccagcactcggtgtggaaaggcccctacctgctgtaacagcatcaagctgcacgtg
gaagcatctcgcggttttctagaaacaggcattttcttatccctctcccgctcctttttc
cacaaaggtgaatttcataaatgtaatactagtaaagtgaatgaattactgagtttatac
agaaatttagggctgttcagcagccctgactcagaactcaggtccctggaccttggcttc
aaccccgggaagcaaaaccggagcgtcctgcttctcccttgtgagggcacatgggagaca
cagatgctccctgcacctacccccaagcctggacagggagctcctcgcgtcagcctggag
tcgtcacaacagaaccccaggccagtctcctctcctgatcaacatctcaagccattttca
gtccagcttgggagcctgcccctgctctccccacgaagcccaatgtgtgaacagcagccc
ctacctaaggagtacggcaaccaggtttttaaagacacctgccttcctaccctgaaactg
gcaggaaatcagaagtctctgctctgggaaaacagacccaaaggaaaagacccagaggca
ctgacagcgggagattctctccagaaaatgtccaagtccctgcctgatcccactggagca
aagcttctacacgagaaggagaggaaggaggaaaaagaggagaaggagaaggatgaagag
gaggagacacaagggtggaagaaggaaaaaagaggaggacagatgaggagggggaagagg
atgatggaggaggaggaaaagatgcttttggtttctagggccagtgctggagaggagcac
aagaagatcaagggcgttctggcaaaggatcaggaacaagaagatctgacatcagaggag
gccatgggccccaggcacaaaggacagtag

>gi568815581r:20903034_21142835|GENSCAN_predicted_peptide_3|133_aa
MRDMWSTCEPNRQPKPPDLQISEQENVGRKPILTMEGGAVSVQLIRYLRKRNLVETFPQP
PSSIIQRTETTLDAVAEIIGCDTHSILSTIYTFLQDPRNTNHDLRNFPPEDEGTVVMRVD
PIRSRVHRVLCTP

>gi568815581r:20903034_21142835|GENSCAN_predicted_CDS_3|402_bp
atgagagacatgtggagcacatgtgaacctaatcggcagcccaaaccacctgacctacag
atctctgagcaagaaaatgttggtcgcaaaccaattttaacaatggaaggtggcgctgtt
tccgtgcagctcatcaggtacctcagaaaaagaaatttggtggagacgtttccgcagcct
ccaagcagcatcattcaaaggacagaaacaacccttgatgctgttgcagaaatcataggt
tgtgacacccacagcattctctcaaccatctacacattcctccaagatccacggaacacc
aaccacgaccttcggaatttccctccggaagatgaaggcactgtagttatgcgggtggac
cctatcagatctcgggtccatcgggtcctgtgtacaccttga