GENSCAN 1.0	Date run:  3-Nov-116	Time: 06:54:00

Sequence gi568815594f:75415453_75627211 : 211759 bp : 38.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4726   4929  204  0  0   69   55   154 0.732   8.67
 1.02 Term +   7127   7285  159  1  0  116   38   185 0.989  13.26
 1.03 PlyA +   7966   7971    6                               1.05

 2.04 PlyA -   8005   8000    6                               1.05
 2.03 Term -   8611   8606    6  1  0   98   54     0 0.002  -5.51
 2.02 Intr -  15795  15715   81  0  0   63   91    48 0.081   1.52
 2.01 Init -  18890  18666  225  2  0   71  106   111 0.434   9.72
 2.00 Prom -  27569  27530   40                              -3.45

 3.02 PlyA -  28330  28325    6                               1.05
 3.01 Sngl -  30699  28603 2097  0  0   44   42   726 0.519  57.60
 3.00 Prom -  30792  30753   40                              -6.15

 4.02 PlyA -  30961  30956    6                               1.05
 4.01 Sngl -  32205  31876  330  0  0   88   45   356 0.996  27.07
 4.00 Prom -  36918  36879   40                              -3.95

 5.00 Prom +  42003  42042   40                              -2.65
 5.01 Init +  42619  42743  125  0  2   89   58    82 0.400   5.00
 5.02 Term +  56492  56702  211  2  1  116   41    87 0.275   2.58
 5.03 PlyA +  56826  56831    6                               1.05

 6.06 PlyA -  61166  61161    6                               1.05
 6.05 Term -  67214  67086  129  2  0   93   49    80 0.251   1.80
 6.04 Intr -  75249  75129  121  2  1   63   76    98 0.187   5.68
 6.03 Intr -  97725  97650   76  1  1   88   47    83 0.215   1.85
 6.02 Intr -  98538  98418  121  0  1   61   89    51 0.718   1.65
 6.01 Init -  98834  98703  132  2  0   89   47   194 0.884  15.59
 6.00 Prom -  99805  99766   40                             -13.11

 7.00 Prom + 100118 100157   40                              -4.65
 7.01 Init + 100568 100575    8  1  2   92   83    10 0.967   0.73
 7.02 Intr + 101320 101527  208  1  1   94   72   112 0.967   8.36
 7.03 Intr + 106284 106409  126  2  0   79   78    28 0.642   0.86
 7.04 Term + 111508 111762  255  0  0  104   44   195 0.998  11.30
 7.05 PlyA + 112923 112928    6                               1.05

 8.04 PlyA - 113079 113074    6                               1.05
 8.03 Term - 117661 117066  596  2  2  -35   54   275 0.448   5.50
 8.02 Intr - 135849 135818   32  2  2   55  103     1 0.031  -4.84
 8.01 Init - 136978 136869  110  1  2   70   36   202 0.545  12.94
 8.00 Prom - 137604 137565   40                              -4.25

 9.15 PlyA - 138315 138310    6                               1.05
 9.14 Term - 138795 138728   68  1  2   71   49    78 0.012  -0.68
 9.13 Intr - 140261 140115  147  0  0   57   78    75 0.015   2.69
 9.12 Intr - 146759 146640  120  0  0   65   65    83 0.008   3.25
 9.11 Intr - 168179 168005  175  2  1   30   30   172 0.012   4.19
 9.10 Intr - 176473 176367  107  2  2   63   92    69 0.290   3.81
 9.09 Intr - 180888 180791   98  2  2  109   71    32 0.544   2.33
 9.08 Intr - 181784 181483  302  2  2   58   80   185 0.922   9.31
 9.07 Intr - 182760 182625  136  2  1   63   99    86 0.980   6.85
 9.06 Intr - 184917 184829   89  0  2   82   65    54 0.977   0.35
 9.05 Intr - 188504 188365  140  0  2   92   84    88 0.982   8.06
 9.04 Intr - 190182 190070  113  2  2   82   82    34 0.979   1.30
 9.03 Intr - 191909 191731  179  2  2   74   71   106 0.923   5.30
 9.02 Intr - 198997 198803  195  1  0   60  101    49 0.755   2.09
 9.01 Init - 210536 210369  168  2  0   46  113   167 0.835  14.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  21124  21462  339  0  0   74   41   167 0.800   6.38
S.002 Intr + 148662 148800  139  1  1  145   37   103 0.902   9.50
S.003 Init - 168209 168005  205  2  1   89   30   176 0.811  11.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_1|120_aa
SGPFAAGLLEFAGGPLQSLFALVSPAEAAEQQRLLPVPSSGSFIAERHPLQKLARALLYK
VFVNPCWEALNGLDDASPRSTSVRVIVFTQPIDSNTNLFWKHSQTHPEVMFGQPSEHPLA

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_1|363_bp
tcaggcccatttgctgcaggactgctggagtttgctggaggtccactccagtccctgttt
gccttggtgtcaccagcagaggctgcagaacagcaaagattgctgcctgttccttcctct
ggaagtttcatagcagagaggcacccactccagaagttagccagagctctcctgtataag
gtgtttgtcaatccctgctgggaggccctcaacggattggatgatgcctctccacggtcc
acatcggtgagggtgattgtctttactcagcctattgattcaaacactaatctcttctgg
aaacactctcagactcacccagaagtaatgtttggccagccatcggagcatcctctggct
tag

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_2|103_aa
METDMLGFITRLFFSRYDVAVETQSPNPQRTLCSSPSCCIHLRCISLAEEPSEIGVASLL
IQISREGIYPWTFSWLKLKGGNYGISARLFPAKQSDSTVGSQA

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_2|312_bp
atggagacagacatgctgggcttcatcacaaggctgtttttctccaggtatgatgttgct
gtggaaacacaaagcccaaatcctcaaagaacactctgttctagtcccagctgctgtatc
catctgcgttgtatctcattagcagaagagcctagtgagataggagttgcatctctgctc
atccagatctctagagaagggatctacccctggactttttcctggcttaagctaaaaggg
ggaaattacgggataagtgcaaggctatttcctgccaaacagtcagatagtacagtggga
tctcaggcctga

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_3|698_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSREYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQIHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRLLARLIK
KKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDEFLDTYTLLRLN
QEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKE
GILPISFYKASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAKRIQQHIKKLIHHD
QVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGI
DGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQE
KEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFL
YTNNRQTESQIMSELTFTIASERIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNI
PCSWVGRINIVKMAILPKVIYRFNAIPIKLPMSFFTEL

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_3|2097_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaagagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatactgggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctttgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaatacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaaccctccaaaaaattaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagacttctagcaagactaataaag
aaaaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccact
gatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggatgaattcctggacacatacactctcctaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaattggtaccattccttctgaaactattccaatcaatagaaaaagag
ggaatcctccctatctcattttacaaggccagcatcattctgataccaaagccaggcaga
gacacaacaaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaacgaatccagcagcacatcaaaaagcttatccaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgta
atccagcatataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaa
aaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtatt
gatgggacgtatttcaaaataataagagctatctatgacaaacccacagccaatatcata
ctgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccct
ctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggag
aaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagat
gacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctcata
agcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattctta
tacaccaacaacagacaaacagagagccaaatcatgagtgaactcacattcacaattgct
tcagagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacatt
ccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatt
tacagattcaatgccatccccatcaagctaccaatgtctttcttcacagaattgtaa

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_4|109_aa
MGKKQNRKTGNSKKQSASPPPKERSSSPATEQSWMENDFDELRGEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRS

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_4|330_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaaagcagagtgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgactttgac
gagctgagaggagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaacttcgaaaaaaatttggaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaatta
cgtgaagaatgcagaagcctcaggagctga

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_5|111_aa
MKRSMWLGEIISGREGSQVMGPDHIGPSKEGEREKEKWGEERVDPTLWGGRSSVSDYVGM
FNLEQGRTNSVWPWFQATISFPALSSISDSHIYYTIDSELDSKLQKRIIPL

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_5|336_bp
atgaagaggtcgatgtggctgggagaaataataagtgggagagaagggagccaggtaatg
gggccagatcatatagggcctagtaaggaaggagagagggagaaagagaagtggggtgaa
gaaagggtagatcctaccctgtggggaggaaggtcttcagtcagcgactatgtgggtatg
ttcaatttagagcaaggaagaacaaactcagtttggccttggttccaagccacaatctct
tttccagctttatcatcaatatctgactctcatatctactacacaattgattcagaactt
gattcaaaactccagaagaggattatacccctttaa

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_6|192_aa
MAATAREDGASGQERGQRGCEHYDRGCLLKVTPSMDSSLTSFRQQNPSWEVIRLAQWSLP
VGLFVFCCRSRLRQPRACTGVFRSGHGLTNIAPLNWMKLLKNVGHPPSVVGYRCPLCMHS
ALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNTA
QAGGRRISLDQQ

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_6|579_bp
atggcggcgacggcccgggaagatggcgccagcggtcaagagcgaggtcagcggggctgc
gagcactatgacagaggatgtctcctaaaggtgacgccttctatggactcttccctgaca
agcttccgtcagcaaaacccttcttgggaagtgattaggcttgcacagtggtctctgcca
gtgggcttattcgtcttttgctgccgaagtagactgaggcagccccgggcctgtactggg
gttttccgttcaggtcatggcttgacgaacattgctccactgaactggatgaagctcctt
aaaaatgttggtcatccaccaagtgttgtaggctacagatgtccattatgtatgcactct
gctttagatatgaccaggtattggagacagctggatgatgaagtagcacagactcctatg
ccatcagaatatcagaacatgactgtggatattctctgcaatgactgtaatggacgatcc
actgttcagtttcatatattaggcatgaaatgtaagatttgtgaatcctataatactgct
caagctggaggacgtagaatttcactggatcagcaatga

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_7|198_aa
MKEFPTDENIKRKWVLAMKRLDVNAAGIWEPKKGDVLCSRHFKKTDFDRSAPNIKLKPGV
IPSIFDSPYHLQGKREKLHCRKNFTLKTVPATNYNHHLVGASSCIEEFQSQFIFEHSYSV
MDSPKKLKHKLDHVIGELEDTKESLRNVLDREKRFQKSLRKTIRELKDECLISQETANRL
DTFCWDCCQESIEQDYIS

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_7|597_bp
atgaaggaattccccacagatgaaaacatcaaaaggaaatgggtattagcaatgaaaaga
cttgatgtgaatgcagccggcatttgggagcctaaaaaaggagatgtgttgtgttcgagg
cactttaagaagacagattttgacagaagtgctccaaatattaaactgaaacctggagtc
ataccttctatctttgattctccatatcacctacaggggaaaagagaaaaacttcattgt
agaaaaaacttcaccctcaaaaccgttccagccactaactacaatcaccatcttgttggt
gcttcctcatgtattgaagaattccaatcccagttcatttttgaacatagctacagtgta
atggacagtccaaagaaacttaagcataaattagatcatgtgatcggcgagctagaggat
acaaaggaaagtctacggaatgttttagaccgagaaaaacgttttcagaaatcattgagg
aagacaatcagggaattaaaggatgaatgtctgatcagccaagaaacagcaaatagactg
gacactttctgttgggactgttgtcaggagagcatagaacaggactatatttcatga

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_8|245_aa
MVIIADGSSMHVIAPEDLPVEQDVEVEDSDSDDPDPVATSHPASSICGKESIKVQKICSP
TCNKKKIPFSEEKFKPAAETCVSNEELNVNPQDNGENVSRACQRSSRQPLPSQVWRPRRK
VWFCGPGPGSPCCVQPRDLVPCVPATPAMAERSQHTPWAVASEGASLKPWQLPYDVEPLS
AQKSRTEVWASPPKFQMYGNAWMPRQKFVVGPGSSWRTSARAVQKGNVELEPPHRVPTGH
CLVEL

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_8|738_bp
atggttatcatagcagatggcagctctatgcatgttattgcccctgaagatcttccagtg
gaacaagatgtggaggtggaagacagtgacagtgatgatcctgaccccgtagcaacttcc
catcctgcaagctccatttgtggaaaggagagcataaaagttcagaaaatttgcagccca
acttgcaataaaaagaaaatcccattttctgaagagaaattcaagccggctgcagaaact
tgcgtaagtaatgaggagctgaatgttaatccccaagacaatggggaaaatgtctccagg
gcatgtcagcgatcttcaaggcagccccttccatcacaggtctggaggcctaggaggaaa
gtatggttttgtgggccaggcccagggtccccgtgttgtgtgcagcccagggacttggtg
ccctgtgtcccagccactccagccatggctgaaaggagccaacatacaccttgggccgtg
gcttcagagggtgcaagtctcaagccttggcagcttccatatgatgttgagcctttgagt
gcacagaagtcaagaactgaggtttgggcatctccgcctaaatttcagatgtatggaaat
gcctggatgcccaggcagaagtttgttgtagggccagggtcctcatggagaacctctgct
agggcagtgcagaagggaaatgtggagttggaacccccacacagagtccctactgggcac
tgcctagtggagctgtga

>gi568815594f:75415453_75627211|GENSCAN_predicted_peptide_9|678_aa
MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH
ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH
NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYG
KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL
PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQEL
QLKVQKDARNVSLSKKSQNRKKEKEKDDSLVEERKTLVVQDTNADPKIKDYKLFKIKGSK
IDGEKAEKGNRASNASCLHDSRTSHNKIVPSTSLKDCSNVSVDHTRNPSVAIPPLTHNLS
AVAPSINSGMGTETIPIQGYRVDEKTKKCSIPFVKPNRHSPSGIYNINVTTLVTRNSRLT
KKESKILSESRIPSLAAIDLHTPSITLHQMCGLLAKCLQFHIVGAFIVSLGVAAVCKIAV
AEPRKKTYADFYRNYDSVKDLEEMGKAVPHTYILFHRRTLEMSVVSPTHLLAMADWTTDR
HSTHSLSAYLLKKRNKRERALPGGFLTPVVCSGELGIILRPPTRVYAASLLCFCPGVSDT
GQGAGAKDKIPALMELIV

>gi568815594f:75415453_75627211|GENSCAN_predicted_CDS_9|2037_bp
atggaaaaatatgaaaacctgggtttggttggagaagggagttatggaatggtgatgaag
tgtaggaataaagatactggaagaattgtggccataaagaagttcttagaaagtgacgat
gacaaaatggttaaaaagattgcaatgcgagaaatcaagttactaaagcaacttaggcat
gaaaacttggtgaatctcttggaagtgtgtaagaaaaaaaaacgatggtacctagtcttt
gaatttgttgaccacacaattcttgatgacttggagctctttccaaatggactagactac
caagtagttcaaaagtatttgtttcagattattaatggaattggattttgtcacagtcac
aatatcatacacagagatataaagccagagaatatattagtctcccagtctggcgttgtc
aagctatgcgattttggatttgcgcgaacattggcagctcctggggaggtttatactgat
tatgtggcaacccgatggtacagagctccagaactattggttggtgatgtcaagtatggc
aaggctgttgatgtgtgggccattggttgtctggtaactgaaatgttcatgggggaaccc
ctatttcctggagattctgatattgatcagctatatcatattatgatgtgtttaggtaat
ctaattccaaggcatcaggagctttttaataaaaatcctgtgtttgctggagtaaggttg
cctgaaatcaaggaaagagaacctcttgaaagacgctatcctaagctctctgaagtggtg
atagatttagcaaagaaatgcttacatattgaccccgacaaaagacccttctgtgctgag
ctcctacaccatgatttctttcaaatggatggatttgctgagaggttttcccaagaacta
cagttaaaagtacagaaagatgccagaaatgtttctttatctaaaaaatcccaaaacaga
aagaaggaaaaagaaaaagatgattccttagttgaagaaagaaaaacacttgtggtacag
gataccaatgctgatcccaaaattaaggattataaactatttaaaataaaaggctcaaaa
attgatggagaaaaagctgaaaaaggcaatagagcttcaaatgccagctgtctccatgac
agtaggacaagccacaacaaaatagtgccttcaacaagcctcaaagactgcagcaatgtc
agcgtggaccacacaaggaatccaagcgtggcaattcccccacttacacacaatctttct
gcagttgctcccagcattaattctggaatggggactgagactataccaattcagggttac
agagtggatgagaaaactaagaagtgttctattccatttgttaaaccgaacagacattcc
ccatcaggcatttataacattaatgtgaccacattagtaactcgaaattccaggctaaca
aagaaagagagcaaaattctttcagaatctcgaattccttctctggctgctattgacctg
cacacccccagtattacattacatcagatgtgtggtcttctggccaaatgtctgcaattt
catattgttggagcctttattgtatccctgggggttgcagctgtctgtaagattgctgtg
gctgaaccaagaaagaagacatatgcagatttctacagaaattatgattccgtgaaagat
ttggaggagatggggaaggctgtccctcatacatatattctgtttcatcgacgaaccctg
gaaatgtcagttgtcagtcctacgcaccttctggctatggctgattggaccactgataga
cactcaactcattcactgtctgcttacctacttaaaaagcgaaacaagagggagagggca
ttacccggaggcttcctgaccccggtggtttgcagtggagagttggggatcattcttagg
cccccaaccagggtttatgctgcttctctgctctgcttttgtccaggagtgtcagacact
ggtcaaggtgctggggctaaagataagattcctgctctcatggaacttatagtttag