GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:49:33

Sequence gi568815577f:33995199_34197352 : 202154 bp : 42.51% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14411  14560  150  1  0   69   81   101 0.139   7.59
 1.02 Intr +  17502  17592   91  2  1  -16   93    86 0.023  -2.65
 1.03 Intr +  27287  27411  125  0  2   55   78   129 0.237   7.98
 1.04 Intr +  43571  43672  102  1  0   64  115    93 0.653   9.05
 1.05 Term +  44964  45047   84  2  0   84   43    98 0.679   1.57
 1.06 PlyA +  45154  45159    6                               1.05

 2.00 Prom +  54098  54137   40                              -5.55
 2.01 Init +  57120  57251  132  2  0   48   31   172 0.790   7.69
 2.02 Intr +  59735  59863  129  1  0   19   97    96 0.279   3.57
 2.03 Intr +  64362  64488  127  2  1   57   77    92 0.157   4.33
 2.04 Intr +  74034  74156  123  1  0  104   17   125 0.132   6.64
 2.05 Intr +  78339  78547  209  1  2   30  114   293 0.603  23.97
 2.06 Intr +  83136  83188   53  2  2   21   82    72 0.016  -3.31
 2.07 Term +  97117  97249  133  1  1   86   48    87 0.029   1.08
 2.08 PlyA +  98482  98487    6                               1.05

 3.00 Prom +  98799  98838   40                              -7.65
 3.01 Sngl + 100001 102157 2157  1  0   56   43  1591 0.969 145.25
 3.02 PlyA + 104989 104994    6                               1.05

 4.00 Prom + 106084 106123   40                              -3.85
 4.01 Init + 130185 130282   98  2  2   68  114    61 0.984   6.54
 4.02 Intr + 131029 131148  120  1  0   74   92   114 0.771   9.09
 4.03 Term + 132723 132822  100  0  1   29   52   162 0.553   3.32
 4.04 PlyA + 133352 133357    6                               1.05

 5.03 PlyA - 133527 133522    6                              -1.75
 5.02 Term - 135414 135117  298  2  1   80   48   141 0.201   3.05
 5.01 Init - 140770 140463  308  1  2   43   80   379 0.121  29.41
 5.00 Prom - 143189 143150   40                              -5.65

 6.00 Prom + 143667 143706   40                              -3.65
 6.01 Init + 146522 146586   65  1  2   72   55    31 0.631  -0.92
 6.02 Intr + 147210 147398  189  0  0   96   44   151 0.133   9.28
 6.03 Term + 148220 148562  343  2  1   18   43   205 0.179   2.00
 6.04 PlyA + 148723 148728    6                               1.05

 7.10 PlyA - 148773 148768    6                               1.05
 7.09 Term - 149824 149525  300  1  0   99   48   113 0.389   2.64
 7.08 Intr - 151582 151456  127  0  1   63   69   130 0.779   8.36
 7.07 Intr - 158707 158640   68  1  2  104   72    72 0.139   3.98
 7.06 Intr - 159898 159689  210  1  0   83  -46   211 0.269   5.39
 7.05 Intr - 166316 166248   69  2  0  125   26    84 0.077   4.36
 7.04 Intr - 166617 166474  144  0  0  101   65   125 0.752  11.06
 7.03 Intr - 167949 167882   68  1  2   95   37    23 0.394  -4.39
 7.02 Intr - 171320 171193  128  1  2  131   32    35 0.456   1.60
 7.01 Init - 172360 172179  182  1  2   71   89   101 0.552   7.23
 7.00 Prom - 173475 173436   40                              -6.95

 8.08 PlyA - 174038 174033    6                               1.05
 8.07 Term - 186023 185847  177  2  0   10   48   213 0.681   6.20
 8.06 Intr - 187414 187264  151  0  1   71  100   124 0.796  11.14
 8.05 Intr - 188452 188232  221  1  2  -35   77   164 0.277  -0.82
 8.04 Intr - 191374 191227  148  0  1  142   59    70 0.853   8.82
 8.03 Intr - 192589 192402  188  1  2   42   78   132 0.836   5.17
 8.02 Intr - 196471 196359  113  2  2   24   75   149 0.703   6.38
 8.01 Intr - 199384 199146  239  0  2   59   78   143 0.007   6.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 121852 121725  128  2  2   81   40   137 0.857   5.66
S.002 Term - 166316 166236   81  2  0  125   55    81 0.916   5.21
S.003 Init - 196932 196848   85  0  1   66   64   109 0.833   7.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_1|183_aa
MPRLAKLTWKPGKHHLHGSAPLTSTGEEALDLTGSVVRKEYGRTDSWLTKEAPPEALVKM
KGRTCGMSSPVSAEPGTANAEVQLFEPSEPEEWKGIEVFLPPSRKLRVAEFEHHKPQREV
TETTSVADDMVCSQMLLQSEGTHSPAVRKLTGDGSQHHISCEIQQPAKRPVTTGESPAVT
GRA

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_1|552_bp
atgccccgcttagccaaactcacctggaagccaggaaaacaccatctgcatgggtcagcc
ccactgaccagcacaggggaagaagcactggatctgactggctcagtggtccgtaaggaa
tacggcaggaccgactcctggctgacaaaggaagcccctccagaagccctggtgaagatg
aaagggaggacttgtggaatgtccagcccagtgtctgcagagccaggcacagcaaatgct
gaagtccagctgtttgaaccatctgaaccggaagagtggaaaggaattgaggtgtttctc
cctccttctagaaagttaagggtagcagaatttgaacaccacaagcctcagagagaagtg
acagagacaacttctgtagcagatgatatggtgtgctctcagatgctgcttcagagtgaa
ggcactcattccccggctgtcaggaagctgactggtgatgggtcacagcaccacattagc
tgtgaaatccaacagcctgcaaaacgacctgtgaccacaggggaaagtccggcagtcact
ggaagggcttag

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_2|301_aa
MKTKPQGDSPGTVERETHSCTSRLEADVNDGPGVTIMVELDAGHYPSFQEAVRVLRKQKC
DLINMLFEKDHSGSPRVEEGRPGSVRQMRKLNHRVQLLVQGYTVIGHRRSGFGSMLLTTK
LYCCQLATFEQRIQGQKGKKEPDTGTKETKENPKSTGSWMAKKRPSGLQRAASAFKPGLA
LSDRAFAAWEPSGAAVSRSPLSPPSRPFASREPAGFRAALADPPGMPRYELALILKAMQR
QAIEEGRSPVPAPELQLSLYQVLVSACVLFKLEKSRHDPQSGMVSSEKGTVRSGFEGYEE
A

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_2|906_bp
atgaaaacgaaaccccaaggagacagcccaggcacagtagaaagagagacacacagttgt
accagtcgtttagaagcagatgtgaacgatggcccaggtgtgacgatcatggtagaactt
gatgcaggacattacccctcgttccaggaggcagttagagttttacgtaaacagaaatgt
gatctgatcaacatgctgtttgagaaggaccactctgggagcccgagagtagaagaggga
agacccgggtcagtgaggcagatgaggaaactgaaccacagagttcagttacttgttcaa
gggtacacagtcattggacacaggcggtctggctttggctccatgctcttgaccaccaag
ctgtactgctgccaactagccacctttgaacagcgcattcagggacagaaggggaaaaag
gagccagacacagggaccaaggagacaaaggaaaaccccaagagtacaggatcatggatg
gccaagaagagaccctcaggactgcagagagctgccagcgcctttaagcccgggctcgcg
ctctcggaccgtgctttcgccgcctgggagccgtccggcgcagcagtttctaggtcccca
ctgtccccgccgtcccgccccttcgcgtcccgggaaccggctggcttccgagccgcactc
gccgatcctccaggcatgccccgctacgagctggctttaatcctgaaagccatgcagcgg
caagctattgaagaaggaaggagtcctgttcctgcccctgagctacagctaagtctttac
caggtgctggtctctgcatgtgttttgtttaagttggaaaaatctagacacgacccacag
agtggtatggtatccagtgagaagggaactgtccgcagtggctttgaaggatatgaggaa
gcctag

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_3|718_aa
MRAVLDTADIAIVALYFILVMCIGFFAMWKSNRSTVSGYFLAGRSMTWVAIGASLFVSNI
GSEHFIGLAGSGAASGFAVGAWEFNALLLLQLLGWVFIPIYIRSGVYTMPEYLSKRFGGH
RIQVYFAALSLILYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGMTALLTVTGGLVA
VIYTDTLQALLMIIGALTLMIISIMEIGGFEEVKRRYMLASPDVTSILLTYNLSNTNSCN
VSPKKEALKMLRNPTDEDVPWPGFILGQTPASVWYWCADQVIVQRVLAAKNIAHAKGSTL
MAGFLKLLPMFIIVVPGMISRILFTDDIACINPEHCMLVCGSRAGCSNIAYPRLVMKLVP
VGLRGLMMAVMIAALMSDLDSIFNSASTIFTLDVYKLIRKSASSRELMIVGRIFVAFMVV
ISIAWVPIIVEMQGGQMYLYIQEVADYLTPPVAALFLLAIFWKRCNEQGAFYGGMAGFVL
GAVRLILAFAYRAPECDQPDNRPGFIKDIHYMYVATGLFWVTGLITVIVSLLTPPPTKEQ
IRTTTFWSKKNLVVKENCSPKEEPYKMQEKSILRCSENNETINHIIPNGKSEDSIKGLQP
EDVNLLVTCREEGNPVASLGHSEAETPVDAYSNGQAALMGEKERKKETDDGGRYWKFIDW
FCGFKSKSLSKRSLRDLMEEEAVCLQMLEETRQVKVILNIGLFAVCSLGIFMFVYFSL

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_3|2157_bp
atgagagctgtactggacacagcagacattgccatagtggccctgtattttatcctggtc
atgtgcattggtttttttgccatgtggaaatctaatagaagcaccgtgagtggatacttc
ctggcggggcgctctatgacctgggtagcaattggtgcctctctgtttgtgagcaatatt
gggagtgagcacttcattgggctggcaggatctggagctgcaagtggatttgcagtgggc
gcatgggaattcaatgccttactgcttttacaacttctgggatgggttttcatcccaatt
tacatccggtcaggggtatataccatgcctgaatacttgtccaagcgatttggtggccat
aggattcaggtctattttgcagccttgtctctgattctctatattttcaccaagctctcg
gtggatctgtattcgggtgccctttttatccaggagtctttgggttggaatctttatgtg
tctgtcatcctgctcattggcatgactgctttgctgactgtcaccggaggccttgttgca
gtgatctacacagacactctgcaggctctgctcatgatcattggggcacttacacttatg
attattagcataatggagattggcgggtttgaggaagttaagagaaggtacatgttggcc
tcacccgatgtcacttccatcttattgacatacaacctttccaacacaaattcttgtaat
gtctcccctaagaaagaagccctgaaaatgctgcggaatccaacagatgaagatgttcct
tggcctggattcattcttgggcagaccccagcttcagtatggtactggtgtgctgaccaa
gtcatcgtgcagagggtccttgcagccaaaaacattgctcatgccaaaggctctactctt
atggctggcttcttaaagctcctgccaatgtttatcatagttgtcccaggaatgatttcc
aggatactgtttactgatgatatagcttgcatcaacccagagcactgcatgctggtgtgt
ggaagcagagctggttgctccaatattgcttacccacgcctggtgatgaagctggttcct
gtgggccttcggggtttaatgatggcagtgatgattgcagctctgatgagtgacttagac
tctatctttaacagtgccagtaccatattcaccctcgatgtgtacaaacttatccgcaag
agcgcaagctcccgggagttaatgattgtggggaggatatttgtggcatttatggtggtg
atcagcatagcatgggtgccaatcatcgtggagatgcaaggaggccagatgtacctttac
attcaggaggtagcagattacctgacacccccagtggcagccttgttcctgctggcaatt
ttctggaagcgctgcaatgaacaaggggctttctatggtggaatggctggctttgttctt
ggagcagtccgtttgatactggcctttgcctaccgtgccccagaatgtgaccaacctgat
aataggccgggcttcatcaaagacatccattatatgtatgtggccacaggattgttttgg
gtcacgggactcattactgtaattgtgagccttctcacaccacctcccacaaaggaacag
attcgaaccaccaccttttggtctaagaagaacctggtggtgaaggagaactgctcccca
aaagaggaaccatacaaaatgcaagaaaagagcattctgagatgcagtgagaataatgag
accatcaaccacatcattcccaacgggaaatctgaagacagcattaagggccttcagcct
gaagatgttaatctgttggtaacctgcagagaggagggcaacccagtggcatccttaggt
cattcagaggcagaaacaccagttgacgcttactccaatgggcaagcagctctcatgggt
gagaaagagagaaagaaagaaacggatgatggaggtcggtactggaagttcatagactgg
ttttgtggctttaaaagtaagagcctcagcaagaggagtctcagagacctgatggaagag
gaggctgtttgtttacagatgctagaagagactcggcaagttaaagtaatactaaatatt
ggactttttgctgtgtgttcacttggaattttcatgtttgtttatttctccttatga

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_4|105_aa
MDRGAIVRDLENLGERALPYRISAHSQQHNRGGTQVMGLPSALPQGPSKTVSADVLCDEN
AACSYVSRAVLCSPRGYDTYPKLRQGADLKPDSGVREPAFGWLME

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_4|318_bp
atggacagaggagcaatagtgagggacttggaaaacctgggtgaacgagcgcttccttat
aggatctctgcccacagtcagcagcacaacagaggcggaactcaggttatgggtctccca
tctgcattgccacaaggacccagcaagacagtctctgcagatgtgctctgcgacgagaat
gctgcttgtagttatgtgagtcgagctgtcttgtgcagccctagaggctatgacacgtat
ccgaaattacggcaaggcgctgatttgaaacctgacagtggtgtgcgagagccagctttt
ggctggctaatggagtga

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_5|201_aa
MQISDISLQDSIAVKEKYAKYLPHNAGPYAAKRFCKAQCPIVESLTNSMIMHGHNNSKKL
MTVRIIKYAFHFIHLLTGENPHLQVLVNTIINGGPQEDSTGFGHSHATKLSTTWPKPSRD
LKTLREMASPRQTVPQYWKTMPPKTLHSQQHGCKRASSSHVPSAPPLERPSPSTIQSPCR
LPGAASPSPTPLVVQGENCIF

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_5|606_bp
atgcagatcagtgacatttccctgcaggattccattgcagtgaaggagaagtatgccaag
tacctgcctcacaatgcagggccttatgctgccaaacgcttctgcaaagctcagtgcccc
attgtggagtccctcactaactccatgataatgcatggccacaacaacagcaagaagctc
atgactgtgcgcatcatcaagtatgccttccatttcatccacctgctcacaggcgagaac
cctcacctccaggtcctggtgaacaccatcatcaatggtggtccccaggaggactccaca
ggctttggacactcacatgctacaaaactctctactacatggcccaaaccctctagagat
ctgaaaacactcagagaaatggcttccccaagacagactgtgccccaatactggaaaaca
atgccaccaaaaacactccattcacagcagcatggttgtaagagagccagcagctctcat
gtcccttctgcccctcccctggagaggcctagcccctccaccattcagtcaccatgcaga
ctgcccggtgctgccagcccttccccgactcccctagttgtccagggggaaaactgtatt
ttctga

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_6|198_aa
MGSFLALSASRLLRTLSIFEDQYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVKHPLTQ
ELKECEGIVPVPLAEKLYSTKKRKKMGEDEVVSQNSHLHLFLGLLGADWKDLTSPSPFPG
GALHKVSVTITDDGTSAHKMLGEVPVLGISEKQEGAESSGLCFVFNHGKTGGWRDVQEMP
KAPGGPGLPALAQRLLPL

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_6|597_bp
atgggctctttccttgcactgtcagccagcaggctgctgaggaccttgtcaatctttgaa
gaccagtatttcttggtggatttttatgcacccaccgcagctgttgaaagcatggtggag
cacttgtctcgagatatagatgtgattagagggaatattgtcaaacaccctctgacccag
gaactaaaagaatgtgaagggattgtcccagtcccactcgcagaaaaattatattccaca
aagaagaggaagaagatgggtgaggatgaggtcgtttcccaaaacagtcacctgcatctc
ttcctcggtctcctcggggctgattggaaagacttgactagcccttcccccttcccaggg
ggtgccctgcacaaggtgtctgtcaccatcacagatgacggaacttctgcacataaaatg
ttgggggaagtgccggttctgggaatctctgaaaagcaggaaggagccgagagttctggc
ctctgctttgtttttaaccatggcaagaccggaggatggagagatgtgcaagagatgccc
aaagcgccaggagggcctggtctcccagctctggcccagcgcctcctccctctgtag

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_7|431_aa
MVAWPVLPAPTLGGMFVGKHRNHTAADSCHHYRTLLCYPTSSAFCRKQHPSENATVAPAT
WTHHRAASPRPARAGKYGPRVLHSWLAGSQPHAAAVAFSIHGQGLTGLGAPSLSWDLKRR
KSSNSQVIVSLYYGTLPSDASSKLERVNFPNLKLVGLGLGSGEGNPEAQHAGKRAIKLQA
VMQPEPLTIAPSARDPYHLTVTIATNPIQHKSSSYVRTSPRSSSDRPRRQNEMDLPTLIH
LPEENQLRKWENNTATSTQQCSDRKAWEKSSFLLVGMTIKLHDHFDDAAGEEAWGLALGA
ASEGPRGAGHPEPAPRGIIRTAGIGNIYLQEPVSSLPDLAPQFLVTSHDWLLALQSSACT
CPPHSILCTPPSSSYTVHTLSASMPILSSTRPGPVFVYGSTASTLPLSSPEGGDQSLGPP
PAWAGRPDALL

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_7|1296_bp
atggtggcatggcctgtgctccctgctcccacacttggaggaatgtttgttggaaaacat
cgaaaccacactgcagctgattcttgtcaccattaccgcaccctgctgtgctacccgacg
tcaagtgcattctgcaggaagcagcacccctctgaaaatgccactgtggcaccagctaca
tggacccaccacagagcagcatctccccgccctgccagggctgggaagtatggcccaaga
gtcctgcacagctggctggctggttcccagccacatgctgctgccgtagccttctccatc
catggtcaaggtctaacaggtctaggagctccaagtttatcttgggaccttaagaggaga
aaatcatccaactcacaggtaattgtgtctctgtactatgggaccctcccctcagatgca
tcctccaaactggaaagagttaatttcccaaaccttaaactggttggcttaggactgggt
tcaggggaaggaaacccagaagcccaacatgccggcaaaagggccatcaaactccaagcg
gtcatgcaaccagaacctctgacaatagccccttctgccagggacccttaccatctgact
gtcaccattgccacaaacccaattcaacacaaaagcagctcctacgtcagaaccagtcct
cgcagcagttcagataggcctaggaggcaaaatgaaatggatctacccacactgattcat
ttacctgaagagaatcagctcaggaagtgggagaacaacacagccacaagcacgcaacag
tgctcagacaggaaggcttgggaaaaatcaagttttttgctggtgggaatgaccatcaaa
ctgcatgaccattttgatgatgcagcaggcgaggaagcctggggtctggctctaggtgca
gcgtcggaagggcccagaggagcaggtcatccagagccagcccctcgtggcataatcagg
actgcagggattggcaacatctacctccaggagcctgtctccagtctcccagatctggcc
cctcagttccttgtgacatcacacgactggctcctcgcccttcagagctcagcttgcacg
tgccctccccactccatcctctgtactccccccagcagctcctacactgtacatactttg
tctgcctccatgccaattctcagctccacgaggccagggcctgtctttgtctatggctct
actgccagcactttgccattatcatcccctgaaggaggagaccagagcctcggaccacca
ccagcctgggcagggagaccggatgctctactctga

>gi568815577f:33995199_34197352|GENSCAN_predicted_peptide_8|412_aa
XQPTCTPEGQTNKHRQSGFRVNQISSNMILQSEQLSSAPFNTRFLSELGGPAKSDGCLKW
VKVWGGAKKAQYLQSDDLDRETKSSAFRSMKTTHYPIREMPVTEMPVEIGSFWLQAELVI
EVNWRRETMTLTSNLEIRLENSTQETPTLAFKSKSTVWIGSMDLIISLDSGPRGKNLNSR
WCVYIDTYSCLANEVQGHLHRLPAHRTAGPLRPGTRAISVTLFPELGTEEPASQDEQEQA
KGNGSQTSASIRVAWKIYRNRLPKIWGATQELAFLTFLLVENLPSEKDGPIQGRATGLEY
MGQRLHKPQYQDTVSERPRAEMERRSAAETRHLLVTPAQSWLLQQWLVWKMGQKWTLSMI
SATVTYNPSVKGRNFPMQKQQKVNRGNIAMSKGSSTQYLRLCYKATQRVDEK

>gi568815577f:33995199_34197352|GENSCAN_predicted_CDS_8|1239_bp
nnacaaccaacttgcacacctgaaggtcaaacgaacaaacatcgtcagagtggattcagg
gtaaaccaaatctcttctaatatgatactgcagagtgaacaacttagctctgcaccattc
aacacaagatttctgagtgagcttggaggccctgcaaaaagtgacggctgccttaaatgg
gttaaagtttggggaggggccaagaaagcccagtacctccaaagcgatgacctagacaga
gagacaaaaagcagtgcttttcgaagtatgaaaactacccattatcccattagagagatg
ccggttacagagatgccggtggaaatcggaagcttctggcttcaggcagaactagtcatt
gaagtcaactggagaagagaaacgatgactttaacatccaacctagaaatccgccttgaa
aatagcacccaagaaacgccaacgctggcattcaaaagcaaaagcactgtatggattggg
tctatggatctcataatttccttagactctgggccaaggggcaaaaacttaaattcaaga
tggtgtgtgtacatagatacatactcgtgtttagctaatgaagtacaaggtcacctgcac
aggctgcctgcccaccggactgctggccccttgaggccaggaaccagggccatctctgtc
accctcttcccagagcttggcaccgaggagcctgcaagccaggatgagcaggaacaggcc
aagggcaatggttctcaaacttcagccagcatcagagtcgcctggaagatctatcgcaac
agactgccaaagatctggggtgcaactcaagaactggcatttctaaccttcctcctagtg
gaaaatttgccttcagaaaaagatggcccaatccagggaagagccactggcctagagtat
atgggacagaggttgcacaagcctcaataccaggacactgtgtcagagaggcccagggca
gaaatggagagacgcagtgcagctgaaacaaggcaccttctggttacacctgcgcaaagc
tggctgctccagcaatggctggtgtggaagatgggtcagaagtggactctgtctatgatt
tcagcaacggtgacatataatcccagtgttaaaggacggaattttccaatgcagaagcag
cagaaagtgaacagaggaaacattgccatgagcaaaggctcctcaacacagtatctccga
ctgtgctacaaagccacccagcgtgtggatgaaaagtga