Result of FASTA (omim) for pF1KB6393
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6393, 276 aa
  1>>>pF1KB6393 276 - 276 aa - 276 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0024+/-0.000291; mu= 11.7279+/- 0.018
 mean_var=84.4881+/-17.935, 0's: 0 Z-trim(118.2): 188  B-trim: 1656 in 1/55
 Lambda= 0.139533
 statistics sampled from 30662 (30908) to 30662 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.362), width:  16
 Scan time:  7.850

The best scores are:                                      opt bits E(85289)
NP_001039021 (OMIM: 601099) src-like-adapter isofo ( 276) 1870 385.8 4.7e-107
NP_001039022 (OMIM: 601099) src-like-adapter isofo ( 293) 1870 385.8  5e-107
NP_006739 (OMIM: 601099) src-like-adapter isoform  ( 316) 1870 385.8 5.3e-107
NP_001269894 (OMIM: 601099) src-like-adapter isofo ( 168) 1120 234.7 8.8e-62
XP_016869228 (OMIM: 601099) PREDICTED: src-like-ad ( 168) 1120 234.7 8.8e-62
NP_001269893 (OMIM: 601099) src-like-adapter isofo ( 249)  803 171.0   2e-42
NP_115590 (OMIM: 606577) src-like-adapter 2 isofor ( 261)  630 136.2 6.3e-32
XP_016883587 (OMIM: 606577) PREDICTED: src-like-ad ( 288)  475 105.0 1.7e-22
NP_778252 (OMIM: 606577) src-like-adapter 2 isofor ( 210)  472 104.3   2e-22
XP_011539756 (OMIM: 153390,615758) PREDICTED: tyro ( 516)  390 88.0 3.9e-17
XP_011539755 (OMIM: 153390,615758) PREDICTED: tyro ( 516)  390 88.0 3.9e-17
NP_001317397 (OMIM: 153390,615758) tyrosine-protei ( 458)  387 87.4 5.3e-17
NP_001165602 (OMIM: 142370) tyrosine-protein kinas ( 504)  336 77.1 7.1e-14
NP_001165600 (OMIM: 142370) tyrosine-protein kinas ( 505)  336 77.1 7.1e-14
NP_001165604 (OMIM: 142370) tyrosine-protein kinas ( 505)  336 77.1 7.1e-14
NP_001165603 (OMIM: 142370) tyrosine-protein kinas ( 506)  336 77.1 7.1e-14
NP_001165601 (OMIM: 142370) tyrosine-protein kinas ( 525)  336 77.2 7.4e-14
NP_002101 (OMIM: 142370) tyrosine-protein kinase H ( 526)  336 77.2 7.4e-14
XP_011542131 (OMIM: 191305,613375) PREDICTED: tyro ( 344)  321 74.0 4.2e-13
XP_011542130 (OMIM: 191305,613375) PREDICTED: tyro ( 345)  321 74.0 4.2e-13
NP_001317394 (OMIM: 191305,613375) tyrosine-protei ( 434)  321 74.1 5.1e-13
XP_011542129 (OMIM: 191305,613375) PREDICTED: tyro ( 460)  321 74.1 5.3e-13
NP_001706 (OMIM: 191305,613375) tyrosine-protein k ( 505)  321 74.1 5.8e-13
XP_011542126 (OMIM: 191305,613375) PREDICTED: tyro ( 531)  321 74.1   6e-13
XP_011542127 (OMIM: 191305,613375) PREDICTED: tyro ( 531)  321 74.1   6e-13
NP_001036236 (OMIM: 153390,615758) tyrosine-protei ( 509)  317 73.3   1e-12
NP_005347 (OMIM: 153390,615758) tyrosine-protein k ( 509)  317 73.3   1e-12
NP_001104567 (OMIM: 165120) tyrosine-protein kinas ( 491)  316 73.1 1.1e-12
XP_016868905 (OMIM: 165120) PREDICTED: tyrosine-pr ( 491)  316 73.1 1.1e-12
XP_016868904 (OMIM: 165120) PREDICTED: tyrosine-pr ( 499)  316 73.1 1.2e-12
NP_002341 (OMIM: 165120) tyrosine-protein kinase L ( 512)  316 73.1 1.2e-12
XP_011515831 (OMIM: 165120) PREDICTED: tyrosine-pr ( 682)  316 73.2 1.5e-12
XP_005266937 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
XP_011533955 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
XP_011533957 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
XP_005266939 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
NP_002022 (OMIM: 606573) tyrosine-protein kinase F ( 505)  313 72.5 1.8e-12
XP_005266938 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
XP_011533956 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
XP_016866134 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505)  313 72.5 1.8e-12
XP_011533958 (OMIM: 606573) PREDICTED: tyrosine-pr ( 392)  307 71.2 3.3e-12
XP_011539315 (OMIM: 164940) PREDICTED: tyrosine-pr ( 352)  304 70.6 4.6e-12
XP_011539314 (OMIM: 164940) PREDICTED: tyrosine-pr ( 410)  304 70.7 5.2e-12
XP_016866144 (OMIM: 137025) PREDICTED: tyrosine-pr ( 311)  302 70.2 5.5e-12
NP_005239 (OMIM: 164940) tyrosine-protein kinase F ( 529)  304 70.7 6.4e-12
XP_006710515 (OMIM: 164940) PREDICTED: tyrosine-pr ( 529)  304 70.7 6.4e-12
NP_001036194 (OMIM: 164940) tyrosine-protein kinas ( 529)  304 70.7 6.4e-12
XP_011539312 (OMIM: 164940) PREDICTED: tyrosine-pr ( 529)  304 70.7 6.4e-12
NP_001036212 (OMIM: 164940) tyrosine-protein kinas ( 529)  304 70.7 6.4e-12
NP_002028 (OMIM: 137025) tyrosine-protein kinase F ( 537)  302 70.3 8.6e-12


>>NP_001039021 (OMIM: 601099) src-like-adapter isoform a  (276 aa)
 initn: 1870 init1: 1870 opt: 1870  Z-score: 2042.9  bits: 385.8 E(85289): 4.7e-107
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)

               10        20        30        40        50        60
pF1KB6 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
              190       200       210       220       230       240

              250       260       270      
pF1KB6 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
       ::::::::::::::::::::::::::::::::::::
NP_001 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
              250       260       270      

>>NP_001039022 (OMIM: 601099) src-like-adapter isoform b  (293 aa)
 initn: 1870 init1: 1870 opt: 1870  Z-score: 2042.5  bits: 385.8 E(85289): 5e-107
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:18-293)

                                10        20        30        40   
pF1KB6                  MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
                        :::::::::::::::::::::::::::::::::::::::::::
NP_001 MLHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
               10        20        30        40        50        60

            50        60        70        80        90       100   
pF1KB6 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
               70        80        90       100       110       120

           110       120       130       140       150       160   
pF1KB6 KVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
              130       140       150       160       170       180

           170       180       190       200       210       220   
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
              190       200       210       220       230       240

           230       240       250       260       270      
pF1KB6 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
              250       260       270       280       290   

>>NP_006739 (OMIM: 601099) src-like-adapter isoform c [H  (316 aa)
 initn: 1870 init1: 1870 opt: 1870  Z-score: 2042.0  bits: 385.8 E(85289): 5.3e-107
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:41-316)

                                             10        20        30
pF1KB6                               MGNSMKSTPAPAERPLPNPEGLDSDFLAVL
                                     ::::::::::::::::::::::::::::::
NP_006 GGLRARLTFPVCLLYHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPEGLDSDFLAVL
               20        30        40        50        60        70

               40        50        60        70        80        90
pF1KB6 SDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLG
               80        90       100       110       120       130

              100       110       120       130       140       150
pF1KB6 RDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTF
              140       150       160       170       180       190

              160       170       180       190       200       210
pF1KB6 QCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQED
              200       210       220       230       240       250

              220       230       240       250       260       270
pF1KB6 PEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSS
              260       270       280       290       300       310

             
pF1KB6 PPYFED
       ::::::
NP_006 PPYFED
             

>>NP_001269894 (OMIM: 601099) src-like-adapter isoform e  (168 aa)
 initn: 1120 init1: 1120 opt: 1120  Z-score: 1230.2  bits: 234.7 E(85289): 8.8e-62
Smith-Waterman score: 1120; 100.0% identity (100.0% similar) in 168 aa overlap (109-276:1-168)

       80        90       100       110       120       130        
pF1KB6 RVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLP
                                     ::::::::::::::::::::::::::::::
NP_001                               MIRESETKKGFYSLSVRHRQVKHYRIFRLP
                                             10        20        30

      140       150       160       170       180       190        
pF1KB6 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
               40        50        60        70        80        90

      200       210       220       230       240       250        
pF1KB6 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
              100       110       120       130       140       150

      260       270      
pF1KB6 GGSKRKSSFFSSPPYFED
       ::::::::::::::::::
NP_001 GGSKRKSSFFSSPPYFED
              160        

>>XP_016869228 (OMIM: 601099) PREDICTED: src-like-adapte  (168 aa)
 initn: 1120 init1: 1120 opt: 1120  Z-score: 1230.2  bits: 234.7 E(85289): 8.8e-62
Smith-Waterman score: 1120; 100.0% identity (100.0% similar) in 168 aa overlap (109-276:1-168)

       80        90       100       110       120       130        
pF1KB6 RVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLP
                                     ::::::::::::::::::::::::::::::
XP_016                               MIRESETKKGFYSLSVRHRQVKHYRIFRLP
                                             10        20        30

      140       150       160       170       180       190        
pF1KB6 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
               40        50        60        70        80        90

      200       210       220       230       240       250        
pF1KB6 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
              100       110       120       130       140       150

      260       270      
pF1KB6 GGSKRKSSFFSSPPYFED
       ::::::::::::::::::
XP_016 GGSKRKSSFFSSPPYFED
              160        

>>NP_001269893 (OMIM: 601099) src-like-adapter isoform d  (249 aa)
 initn: 1541 init1: 803 opt: 803  Z-score: 882.7  bits: 171.0 E(85289): 2e-42
Smith-Waterman score: 1457; 84.1% identity (84.1% similar) in 276 aa overlap (1-276:18-249)

                                10        20        30        40   
pF1KB6                  MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
                        :::::::::::::::::::::::::::::::::::::::::::
NP_001 MLHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
               10        20        30        40        50        60

            50        60        70        80        90       100   
pF1KB6 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
               70        80        90       100       110       120

           110       120       130       140       150       160   
pF1KB6 KVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
       ::::::::::::::                                            ::
NP_001 KVGSFMIRESETKK--------------------------------------------EV
              130                                                  

           170       180       190       200       210       220   
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
        140       150       160       170       180       190      

           230       240       250       260       270      
pF1KB6 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
        200       210       220       230       240         

>>NP_115590 (OMIM: 606577) src-like-adapter 2 isoform a   (261 aa)
 initn: 651 init1: 334 opt: 630  Z-score: 694.2  bits: 136.2 E(85289): 6.3e-32
Smith-Waterman score: 630; 42.8% identity (66.9% similar) in 257 aa overlap (6-248:9-259)

                  10               20         30        40         
pF1KB6    MGNSMKSTPAPA-------ERPLPNPEGLDSDFLAV-LSDYPSPDISPPIFRRGEKL
               :: :.:.       . :.   :.  :   :: :...:.   .   .: :: :
NP_115 MGSLPSRRKSLPSPSLSSSVQGQGPVTM-EAERSKATAVALGSFPAGGPAELSLRLGEPL
               10        20         30        40        50         

      50        60        70        80        90       100         
pF1KB6 RVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFM
        ..:..: :: ..:  .:::  ::.. ::.: ::::.:::.:.:::::: :: .  :.:.
NP_115 TIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFL
      60        70        80        90       100       110         

     110       120             130       140       150       160   
pF1KB6 IRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
       ::::.:..: ::::::  .      ..::::  : :.: ::::::::  :. ::.::::.
NP_115 IRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSEL
     120       130       140       150       160       170         

           170       180       190       200       210       220   
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
       :: .::.:  ::. : ..    .    :::...  ..:.   .:. .   .:   : .::
NP_115 ADDICCLLKEPCVLQRAGPLPGKDIPLPVTVQRTPLNWK---ELDSSLLFSEAATG-EES
     180       190       200       210          220       230      

           230       240       250       260       270      
pF1KB6 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
       :.: :::::.. :.::..:  .:.:                            
NP_115 LLSEGLRESLSFYISLNDE-AVSLDDA                          
         240       250        260                           

>>XP_016883587 (OMIM: 606577) PREDICTED: src-like-adapte  (288 aa)
 initn: 491 init1: 334 opt: 475  Z-score: 524.9  bits: 105.0 E(85289): 1.7e-22
Smith-Waterman score: 480; 38.2% identity (59.3% similar) in 285 aa overlap (6-265:9-286)

                  10               20         30        40         
pF1KB6    MGNSMKSTPAPA-------ERPLPNPEGLDSDFLAV-LSDYPSPDISPPIFRRGEKL
               :: :.:.       . :. . :.  :   :: :...:.   .   .: :: :
XP_016 MGSLPSRRKSLPSPSLSSSVQGQGPV-TMEAERSKATAVALGSFPAGGPAELSLRLGEPL
               10        20         30        40        50         

      50        60        70        80        90       100         
pF1KB6 RVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFM
        ..:..: :: ..:  .:::  ::.. ::.: ::::.:::.:.:::::: :: .  :.:.
XP_016 TIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFL
      60        70        80        90       100       110         

     110       120             130       140       150       160   
pF1KB6 IRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
       ::::.:..: ::::::  .      ..::::  : :.: ::::::::  :. ::.:::. 
XP_016 IRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSDR
     120       130       140       150       160       170         

            170       180         190         200       210        
pF1KB6 A-DGLCCVLTTPCLTQSTAAPAVR--ASSSPVTLRQK--TVDWRRVSRLQEDPEGTENPL
         .::      : .  :  :   :  : ::: .: .:  :      . :     .  .::
XP_016 QKSGL------PYFHASPYAKKCRLGALSSPRALAEKPQTSCVGSGQYLAYHSGSDSEPL
     180             190       200       210       220       230   

      220        230         240          250       260       270  
pF1KB6 GVDESLFS-YGLRESIA--SYLSLTSED-NTSFDR--KKKSISLMYGGSKRKSSFFSSPP
       .. . : .  : : . .  : :.: : .   ::.:  : .:..   :: . ..       
XP_016 AAGRVLSTGTGHRAAAVWDSILTLLSTSWCLSFNRHWKMQSLGTASGGREGRALL     
           240       250       260       270       280             

           
pF1KB6 YFED

>>NP_778252 (OMIM: 606577) src-like-adapter 2 isoform b   (210 aa)
 initn: 495 init1: 334 opt: 472  Z-score: 523.7  bits: 104.3 E(85289): 2e-22
Smith-Waterman score: 472; 46.8% identity (68.4% similar) in 171 aa overlap (6-162:9-178)

                  10               20         30        40         
pF1KB6    MGNSMKSTPAPA-------ERPLPNPEGLDSDFLAV-LSDYPSPDISPPIFRRGEKL
               :: :.:.       . :. . :.  :   :: :...:.   .   .: :: :
NP_778 MGSLPSRRKSLPSPSLSSSVQGQGPV-TMEAERSKATAVALGSFPAGGPAELSLRLGEPL
               10        20         30        40        50         

      50        60        70        80        90       100         
pF1KB6 RVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFM
        ..:..: :: ..:  .:::  ::.. ::.: ::::.:::.:.:::::: :: .  :.:.
NP_778 TIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFL
      60        70        80        90       100       110         

     110       120             130       140       150       160   
pF1KB6 IRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
       ::::.:..: ::::::  .      ..::::  : :.: ::::::::  :. ::.:::: 
NP_778 IRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSEG
     120       130       140       150       160       170         

           170       180       190       200       210       220   
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
                                                                   
NP_778 WPAPWQGYTPTCDCAEDTTQLERAGQLPPVF                             
     180       190       200       210                             

>>XP_011539756 (OMIM: 153390,615758) PREDICTED: tyrosine  (516 aa)
 initn: 374 init1: 138 opt: 390  Z-score: 428.7  bits: 88.0 E(85289): 3.9e-17
Smith-Waterman score: 398; 35.5% identity (60.6% similar) in 251 aa overlap (9-242:107-354)

                                     10        20        30        
pF1KB6                       MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDY-PSPD
                                     : ::.  :  :  . .... .: .: :: :
XP_011 SLAVGFHLSPTYFLPGLAFLVPHPVTPGFLPIPARFSL-MPLVFTDNLVIALHSYEPSHD
         80        90       100       110        120       130     

        40        50        60        70        80            90   
pF1KB6 ISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVY----HGWLFEGLGRDK
        .   :..::.::.. . : :::: ::.::.:..::   ::..     . :.:..:.:  
XP_011 -GDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKD
          140       150       160       170       180       190    

           100       110       120             130       140       
pF1KB6 AEELLQLPDTKVGSFMIRESETKKGFYSLSVR---HRQ---VKHYRIFRLPNNWYYISPR
       ::. :  : .  :::.:::::.  : .:::::   . :   ::::.:  : :. .:::::
XP_011 AERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPR
          200       210       220       230       240       250    

       150       160       170       180        190       200      
pF1KB6 LTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAP-AVRASSSPVTLRQKTVDWRRVSR
       .::  :..:: ::..  .:   : ..  : :.. .: :  : .. .   :.    :  . 
XP_011 ITFPGLHELVRHYTRYYNGHTKV-AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV
          260       270        280       290       300       310   

        210            220       230       240       250       260 
pF1KB6 LQEDP-----EGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGS
       . ..:     :  ::   ::      :.. .: . :.....                   
XP_011 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR
           320       330       340       350       360       370   

             270                                                   
pF1KB6 KRKSSFFSSPPYFED                                             
                                                                   
XP_011 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF
           380       390       400       410       420       430   




276 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:47:26 2016 done: Fri Nov  4 20:47:27 2016
 Total Scan time:  7.850 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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