Result of FASTA (omim) for pF1KB8939
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8939, 291 aa
  1>>>pF1KB8939 291 - 291 aa - 291 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6149+/-0.000334; mu= 4.1911+/- 0.021
 mean_var=273.8769+/-54.890, 0's: 0 Z-trim(124.2): 48  B-trim: 0 in 0/57
 Lambda= 0.077499
 statistics sampled from 45414 (45469) to 45414 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.829), E-opt: 0.2 (0.533), width:  16
 Scan time:  7.730

The best scores are:                                      opt bits E(85289)
NP_058628 (OMIM: 604994) homeobox protein SIX2 [Ho ( 291) 2013 237.2 2.8e-62
XP_005264157 (OMIM: 604994) PREDICTED: homeobox pr ( 293) 1999 235.7 8.2e-62
NP_005973 (OMIM: 113650,601205,605192,608389) home ( 284) 1453 174.6 1.9e-43
XP_016877091 (OMIM: 113650,601205,605192,608389) P ( 173) 1128 138.0 1.2e-32
NP_005404 (OMIM: 157170,269160,603714) homeobox pr ( 332)  976 121.4 2.4e-27
NP_031400 (OMIM: 206900,212550,606326) homeobox pr ( 246)  954 118.8 1.1e-26
XP_005267816 (OMIM: 606342) PREDICTED: homeobox pr ( 773)  869 109.8 1.7e-23
NP_059116 (OMIM: 606342) homeobox protein SIX4 [Ho ( 781)  869 109.8 1.7e-23
NP_787071 (OMIM: 600963,610896) homeobox protein S ( 739)  744 95.8 2.6e-19


>>NP_058628 (OMIM: 604994) homeobox protein SIX2 [Homo s  (291 aa)
 initn: 2013 init1: 2013 opt: 2013  Z-score: 1239.2  bits: 237.2 E(85289): 2.8e-62
Smith-Waterman score: 2013; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)

               10        20        30        40        50        60
pF1KB8 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 AAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 AAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGL
              190       200       210       220       230       240

              250       260       270       280       290 
pF1KB8 PSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 PSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
              250       260       270       280       290 

>>XP_005264157 (OMIM: 604994) PREDICTED: homeobox protei  (293 aa)
 initn: 1337 init1: 1337 opt: 1999  Z-score: 1230.7  bits: 235.7 E(85289): 8.2e-62
Smith-Waterman score: 1999; 99.3% identity (99.3% similar) in 293 aa overlap (1-291:1-293)

               10        20        30        40        50        60
pF1KB8 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
              130       140       150       160       170       180

                190       200       210       220       230        
pF1KB8 AAEAKER--ENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPP
       :::::::  :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAEAKERYEENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPP
              190       200       210       220       230       240

      240       250       260       270       280       290 
pF1KB8 GLPSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLPSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
              250       260       270       280       290   

>>NP_005973 (OMIM: 113650,601205,605192,608389) homeobox  (284 aa)
 initn: 1400 init1: 1310 opt: 1453  Z-score: 901.0  bits: 174.6 E(85289): 1.9e-43
Smith-Waterman score: 1456; 74.7% identity (87.0% similar) in 300 aa overlap (1-291:1-284)

               10        20        30        40        50        60
pF1KB8 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
       :::::.::::::::::::::::::::.:::::::::::::.:::::::::::::::::::
NP_005 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
       :::::::::::::::::::: :::::::::::.::::::::::::::::::::::::::.
NP_005 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
       ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_005 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
              130       140       150       160       170       180

              190            200       210       220       230     
pF1KB8 AAEAKERENNENSNSNSH-----NPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSP
       :::::::::.::.::.:.     .::.: :: ...:::.: .:  .::..:   .:::. 
NP_005 AAEAKERENTENNNSSSNKQNQLSPLEG-GKPLMSSSEEEFSPPQSPDQNS---VLLLQG
              190       200        210       220       230         

         240       250       260           270       280       290 
pF1KB8 PPPGLPSLHSLGHPPGPSAVPVPVPGGGGADP---LQ-HHHGLQDSILNPMSANLVDLGS
                ..::  . .     .::  ...:   :: :.: ::::.:.:....::::::
NP_005 ---------NMGHARSSN---YSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS
                 240          250       260       270       280    

>>XP_016877091 (OMIM: 113650,601205,605192,608389) PREDI  (173 aa)
 initn: 1128 init1: 1128 opt: 1128  Z-score: 707.1  bits: 138.0 E(85289): 1.2e-32
Smith-Waterman score: 1128; 95.8% identity (99.4% similar) in 167 aa overlap (1-167:1-167)

               10        20        30        40        50        60
pF1KB8 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
       :::::.::::::::::::::::::::.:::::::::::::.:::::::::::::::::::
XP_016 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
       :::::::::::::::::::: :::::::::::.::::::::::::::::::::::::::.
XP_016 GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
       ::::::::::::::::.::::::::::::::::::::::::::::::             
XP_016 IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQGEHRKQ       
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KB8 AAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGL

>>NP_005404 (OMIM: 157170,269160,603714) homeobox protei  (332 aa)
 initn: 973 init1: 804 opt: 976  Z-score: 611.9  bits: 121.4 E(85289): 2.4e-27
Smith-Waterman score: 976; 61.2% identity (83.6% similar) in 232 aa overlap (1-228:79-309)

                                             10        20        30
pF1KB8                               MSMLPTFGFTQEQVACVCEVLQQGGNIERL
                                     : .:::..:. :::: :::.:.. :.::::
NP_005 GGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERL
       50        60        70        80        90       100        

                   40        50        60        70        80      
pF1KB8 GRFLWSLP----ACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQL
       ::::::::    ::: ..:.::.:.:.:::::: ::::.::.:::.:.:. ..:.::: .
NP_005 GRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAM
      110       120       130       140       150       160        

         90       100       110       120       130       140      
pF1KB8 WLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHN
       ::.::: ::::::::::: : :::::.::::::.:::::. ..::::..::.::::: ..
NP_005 WLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQD
      170       180       190       200       210       220        

        150       160       170       180       190       200      
pF1KB8 PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENNENSNSNSHNPLNGSGK
       :::.: .:::::.::::: :::.::::::::::::: ::.: ...  . ..   :   : 
NP_005 PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGC
      230       240       250       260       270       280        

        210       220       230       240       250       260      
pF1KB8 SVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGLPSLHSLGHPPGPSAVPVPVPGGGGAD
        . ::.:. .: ...:  : ::                                      
NP_005 PTHGSAESPST-AASPTTSVSSLTERADTGTSILSVTSSDSECDV               
      290        300       310       320       330                 

>>NP_031400 (OMIM: 206900,212550,606326) homeobox protei  (246 aa)
 initn: 948 init1: 790 opt: 954  Z-score: 600.2  bits: 118.8 E(85289): 1.1e-26
Smith-Waterman score: 954; 58.1% identity (82.6% similar) in 241 aa overlap (1-234:1-238)

               10        20        30            40        50      
pF1KB8 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLP----ACEHLHKNESVLKAKAVV
       : .:: ..:. .::: :::.:...:..:::::::::::    ::: :.::::::.:.:.:
NP_031 MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIV
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB8 AFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFP
       ::: ::.::::.:::.:.:. ..::::: :::.::: ::::::::::: : :::::.:::
NP_031 AFHGGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 LPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRR
       :::.:::::. ..::::..: .::::: ..:::.: .:::::.::::: :::.:::::::
NP_031 LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
              130       140       150       160       170       180

        180       190       200          210       220       230   
pF1KB8 QRDRAAEAKERENNENSNSNSHNPLNGSGKS---VLGSSEDEKTPSGTPDHSSSSPALLL
       :::::: ::.: ...  ...:   : . : .   ::: .    .:... . .... :. .
NP_031 QRDRAAAAKNRLQQQVLSQGSGRALRAEGDGTPEVLGVA---TSPAASLSSKAATSAISI
              190       200       210          220       230       

           240       250       260       270       280       290 
pF1KB8 SPPPPGLPSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
       .                                                         
NP_031 TSSDSECDI                                                 
       240                                                       

>>XP_005267816 (OMIM: 606342) PREDICTED: homeobox protei  (773 aa)
 initn: 890 init1: 863 opt: 869  Z-score: 542.9  bits: 109.8 E(85289): 1.7e-23
Smith-Waterman score: 874; 50.0% identity (70.5% similar) in 302 aa overlap (7-290:98-396)

                                       10        20        30      
pF1KB8                         MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWS
                                     ..:. ..::::::.::::::..::.:::::
XP_005 AAGAAADQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWS
        70        80        90       100       110       120       

         40        50        60        70        80        90      
pF1KB8 LPACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAE
       ::  . :. :::.:::.:.::::.: . :::.:::::.:   ::  ::::: ::.: :::
XP_005 LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE
       130       140       150       160       170       180       

        100       110       120       130       140       150      
pF1KB8 KLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRE
       . :::::::: :::.::::::::.::::::: ::::::::..:.: : .: :::: :::.
XP_005 RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH
       190       200       210       220       230       240       

        160       170       180       190       200       210      
pF1KB8 LAEATGLTTTQVSNWFKNRRQRDRAAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEK
       ::. :::. :::::::::::::::     . ... ..: ....  ...:.  :.     .
XP_005 LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDE-SSKGHEDLSPHPLSS
       250       260       270       280       290        300      

        220          230       240       250          260       270
pF1KB8 TPSGTPDHSSSS---PALLLSPPPPGLPSLHSLGHPPGPSAVPV---PVPGGGGADPLQH
       . .:  . : ::   :. . .     . :: : :   . : ::.   ::  .:..  .: 
XP_005 SSDGITNLSLSSHMEPVYMQQIGNAKI-SLSSSGVLLNGSLVPASTSPVFLNGNS-FIQG
        310       320       330        340       350       360     

                        280         290                            
pF1KB8 HHGL----------QDSILNP--MSANLVDLGS                           
         :.          :   :::  ::.:.:. :                            
XP_005 PSGVILNGLNVGNTQAVALNPPKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSANSAT
          370       380       390       400       410       420    

XP_005 TTSYSPSVPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGAN
          430       440       450       460       470       480    

>>NP_059116 (OMIM: 606342) homeobox protein SIX4 [Homo s  (781 aa)
 initn: 890 init1: 863 opt: 869  Z-score: 542.8  bits: 109.8 E(85289): 1.7e-23
Smith-Waterman score: 874; 50.0% identity (70.5% similar) in 302 aa overlap (7-290:106-404)

                                       10        20        30      
pF1KB8                         MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWS
                                     ..:. ..::::::.::::::..::.:::::
NP_059 AAGAAADQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWS
          80        90       100       110       120       130     

         40        50        60        70        80        90      
pF1KB8 LPACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAE
       ::  . :. :::.:::.:.::::.: . :::.:::::.:   ::  ::::: ::.: :::
NP_059 LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE
         140       150       160       170       180       190     

        100       110       120       130       140       150      
pF1KB8 KLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRE
       . :::::::: :::.::::::::.::::::: ::::::::..:.: : .: :::: :::.
NP_059 RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH
         200       210       220       230       240       250     

        160       170       180       190       200       210      
pF1KB8 LAEATGLTTTQVSNWFKNRRQRDRAAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEK
       ::. :::. :::::::::::::::     . ... ..: ....  ...:.  :.     .
NP_059 LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDE-SSKGHEDLSPHPLSS
         260       270       280       290        300       310    

        220          230       240       250          260       270
pF1KB8 TPSGTPDHSSSS---PALLLSPPPPGLPSLHSLGHPPGPSAVPV---PVPGGGGADPLQH
       . .:  . : ::   :. . .     . :: : :   . : ::.   ::  .:..  .: 
NP_059 SSDGITNLSLSSHMEPVYMQQIGNAKI-SLSSSGVLLNGSLVPASTSPVFLNGNS-FIQG
          320       330       340        350       360        370  

                        280         290                            
pF1KB8 HHGL----------QDSILNP--MSANLVDLGS                           
         :.          :   :::  ::.:.:. :                            
NP_059 PSGVILNGLNVGNTQAVALNPPKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSANSAT
            380       390       400       410       420       430  

NP_059 TTSYSPSVPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGAN
            440       450       460       470       480       490  

>>NP_787071 (OMIM: 600963,610896) homeobox protein SIX5   (739 aa)
 initn: 808 init1: 730 opt: 744  Z-score: 467.6  bits: 95.8 E(85289): 2.6e-19
Smith-Waterman score: 767; 44.9% identity (67.7% similar) in 316 aa overlap (5-286:81-393)

                                          10        20        30   
pF1KB8                           MSMLPT-FGFTQEQVACVCEVLQQGGNIERLGRF
                                     :: . :. ::::::::.: :.:.  ::.::
NP_787 GAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRF
               60        70        80        90       100       110

            40        50        60        70        80        90   
pF1KB8 LWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYI
       : .::  :.:. .. ::.:.:.:::.::.. :::..:::. :   .:: ::.:.:.:.: 
NP_787 LGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYH
              120       130       140       150       160       170

           100       110       120       130       140       150   
pF1KB8 EAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPRE
       :::. ::: :::: :::.:.:::::..::::::: :::::.::..:.  :  : ::.: :
NP_787 EAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDE
              180       190       200       210       220       230

           160       170       180             190          200    
pF1KB8 KRELAEATGLTTTQVSNWFKNRRQRDR------AAEAKERENN---ENSNSNSHNPLNGS
       ::.::  :::. :::::::::::::::      :   .: ..:   :. .: : . :. .
NP_787 KRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERG
              240       250       260       270       280       290

          210               220                  230       240     
pF1KB8 GKSVLGSSEDEKT--------PSGTPDHSS-----------SSPALLLSPPPPGLPSLHS
       .  : . .  . .        :.  :  ::           .:::.::.  :  . .: .
NP_787 AAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGL-A
              300       310       320       330       340          

         250       260       270            280       290          
pF1KB8 LGHPPGPSAVPVPVPGGGGADPLQHH-HGLQDS----ILNPMSANLVDLGS         
       ::.  . :  :. . ::::: : :   .: ...    .:.:.....              
NP_787 LGE--ASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKG
     350         360       370       380       390       400       

NP_787 AQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLS
       410       420       430       440       450       460       




291 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 00:47:11 2016 done: Sat Nov  5 00:47:13 2016
 Total Scan time:  7.730 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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