GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:47:25

Sequence gi568815575f:16551007_16754506 : 203500 bp : 43.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    204    199    6                              -3.24
 1.04 Term -    324    266   59  1  2  129   48    55 0.088   3.45
 1.03 Intr -    551    435  117  0  0   70   50    68 0.063   1.64
 1.02 Intr -   2606   2585   22  2  1   97   98    -6 0.045  -1.58
 1.01 Init -  24715  24434  282  1  0   88   69   208 0.784  14.80
 1.00 Prom -  45672  45633   40                              -2.46

 2.09 PlyA -  45956  45951    6                              -0.45
 2.08 Term -  47088  46004 1085  1  2   72   47   301 0.021  16.67
 2.07 Intr -  50544  50346  199  0  1  110   53    23 0.113  -0.08
 2.06 Intr -  56514  56221  294  0  0   87   54   178 0.925  11.51
 2.05 Intr -  58630  58535   96  1  0   39   91    55 0.522   1.11
 2.04 Intr -  65330  65239   92  0  2   82   60    18 0.453  -1.89
 2.03 Intr -  66240  66144   97  0  1  125  108    61 0.978  11.38
 2.02 Intr -  69326  69271   56  0  2  121   80    19 0.465   3.10
 2.01 Init -  70212  70122   91  0  1   69   26    96 0.370   0.40
 2.00 Prom -  74902  74863   40                              -2.66

 3.00 Prom +  79845  79884   40                              -4.96
 3.01 Init +  90972  91026   55  2  1  103   36    52 0.460   2.95
 3.02 Intr +  95304  95483  180  1  0   42  105    80 0.532   4.94
 3.03 Intr +  99175  99197   23  2  2   98   92     0 0.174  -1.34
 3.04 Intr +  99263  99294   32  1  2   94  113    22 0.199   2.23
 3.05 Intr +  99897  99963   67  0  1   35  111    69 0.200   2.81
 3.06 Intr + 100752 100880  129  2  0   26   91    51 0.507   0.09
 3.07 Term + 103399 103503  105  0  0   85   49    71 0.915   1.31
 3.08 PlyA + 103642 103647    6                               1.05

 4.17 PlyA - 104671 104666    6                               1.05
 4.16 Term - 115242 115144   99  0  0   83   39    66 0.662  -0.67
 4.15 Intr - 116551 116508   44  2  2   94  119     8 0.741   2.46
 4.14 Intr - 120442 120366   77  0  2   78   96    61 0.665   5.06
 4.13 Intr - 127444 127356   89  1  2   60   61    83 0.612   1.57
 4.12 Intr - 132220 132088  133  0  1  115  101   164 0.985  21.05
 4.11 Intr - 138595 138444  152  1  2   47  115    20 0.826  -0.44
 4.10 Intr - 140614 140534   81  1  0   34   77    95 0.851   2.83
 4.09 Intr - 142218 142135   84  0  0   77  105    12 0.770   1.82
 4.08 Intr - 142481 142365  117  2  0   82   80    74 0.900   6.66
 4.07 Intr - 145413 145283  131  1  2   73   87    10 0.944  -0.19
 4.06 Intr - 148087 147917  171  2  0   82   62   117 0.977   8.41
 4.05 Intr - 151910 151731  180  0  0   20   80   217 0.259  13.94
 4.04 Intr - 160587 160507   81  1  0   76  111    -1 0.337   0.61
 4.03 Intr - 161605 161329  277  1  1   23   93   272 0.916  18.29
 4.02 Intr - 168827 168523  305  0  2   87   26   312 0.481  21.21
 4.01 Init - 200127 200055   73  0  1   50   52   102 0.043   4.03
 4.00 Prom - 201898 201859   40                              -3.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  46972  46004  969  1  0   60   47   263 0.951  16.13
S.002 Sngl +  47340  47891  552  2  0   24   37   309 0.859  15.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:16551007_16754506|GENSCAN_predicted_peptide_1|159_aa
MAGCRSRALPHGKAAKARREIQHSAGGPALLGDPAHPPQPLARVLSPSLPGARRAGQLLR
LPGRQAHAHPELQLARKRRTQPRFPLAPLPPHLPILYNEFYMRFGDAAPIYYLDFLTEMV
LGAPAGFYPYLGQRMHGDGGGQIQFYLEKIGAKPETAKL

>gi568815575f:16551007_16754506|GENSCAN_predicted_CDS_1|480_bp
atggcgggctgcaggtcccgagccctgccccacgggaaggcagctaaggcccggcgagaa
atccagcacagcgctggtgggccggcactgctgggggacccagcgcaccctccgcagccg
ctggcccgggtgctaagcccctcattgcccggggcccgcagggccggccagctgctccga
ctgccgggccgccaagcccacgcccacccggaactccagctggcccgcaaacgccgcacg
cagccccggttcccgctcgcgcctctccctccacacctccctatactatacaatgagttt
tacatgagatttggggatgcagcccctatttattacctggattttcttacagaaatggtt
ctaggagcaccagcaggcttttacccttacctgggacagaggatgcatggagatggagga
ggacaaatccagttttatctagagaagattggggctaaaccagaaactgcaaaactgtga

>gi568815575f:16551007_16754506|GENSCAN_predicted_peptide_2|669_aa
MKSLGSSLIAVPIATLVMPRVLCLAAVPQLRKLYGDVPFIEERHRHRFEVNPNLIKQFEQ
NDLSFVGQDVDGDRMEIIELAKLFLRANRTEIKASELRKNTEVVVSNQAGTPADEAFPSV
SGAVTCSNWEPECLLATGLQTVFQCTDFQTVLSELESGLLREQAMGALGSFLLQLSSSTL
SGSCAMVLQERFHLKKSFLCSETAQLMPLIGHPNVVPCQMWAVTLCSRFTIPVILDSHTE
RKDKMHTNPYGTACSSLNSPEGFACCVLIHIPDLLSERGIGIYILLEWLFTDSLGEQGES
EVTRWRIGAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRI
KYLGIHLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFN
AIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSILSQKNKAGGITLPDFKLYCKATVTKT
TWYWYQNRDIDQWNRTEPSEITPHICNYLIFDKPEKNKEWGKDSLFNKWCWENWLAICKR
LKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMCKTPKAMATKA
KIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKQT
TPSKSGRRT

>gi568815575f:16551007_16754506|GENSCAN_predicted_CDS_2|2010_bp
atgaagtcactaggcagctcgttgatcgccgtgcccatcgccacactggtcatgcccagg
gtgctgtgcttagctgcagtgcctcagctacggaaactttatggtgatgttccttttata
gaagaaagacacagacatcggttcgaggtaaaccctaacctgatcaaacaatttgagcag
aatgacttaagttttgtaggtcaggatgttgatggagacaggatggaaatcattgaactg
gcaaagttgtttttaagagcaaacagaacagaaataaaggcatcagaattgaggaagaac
accgaagttgttgttagtaaccaggctggaacacccgccgatgaagccttcccctccgta
tctggggctgttacttgcagcaactgggaacctgaatgcctacttgcaacagggttgcaa
actgtcttccagtgcactgactttcaaactgtgctctcggagctggagtctgggctgctg
cgggagcaggccatgggggctctgggctccttcctgcttcagctgagcagctccacttta
tctggctcatgtgccatggttctgcaagagagatttcatctgaagaagagcttcctgtgt
tctgagactgcacagcttatgccactgattggacatcctaatgtggtcccatgtcagatg
tgggctgtgaccctttgcagccgttttacaattcccgttattttagattctcacactgaa
aggaaggataaaatgcacacaaatccatatggaacagcttgcagttccctgaactcccca
gagggttttgcctgttgtgtcttgatacacattcctgacctgcttagtgagaggggaata
gggatctatatcctattagaatggttgttcacggactcgttaggtgaacaaggtgaatcg
gaggtgacaaggtggcgaatcggagcccaaaatctccttaagctgataagcaacttcagc
aaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataac
agacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaata
aaatacctaggaatccaccttacaagggacgtgaaggacctcttcaaggagaactacaaa
ccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgg
gtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattcaat
gccatcccaatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaag
ttcatatggaaccaaaaaagagccctcattgccaagtcaatcctaagccaaaagaacaaa
gctggaggcatcacactacctgacttcaaactatactgcaaggctacagtaaccaaaaca
acatggtactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaa
ataacaccgcatatctgcaactatctgatctttgacaaacctgagaaaaacaaggaatgg
ggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtaaaagg
ctgaaactggatcccttccttacaccttataccaaaatcaattcaagatggattaaagac
ttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcag
gacataggcatgggcaaggacttcatgtgtaaaacaccgaaagcaatggcaacaaaagcc
aaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactacc
attagagtgaacaggcaacccacaaaatgggagaaaattttcgcaacctactcatctgac
aaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaacaaaca
accccatcaaaaagtgggcgaaggacatga

>gi568815575f:16551007_16754506|GENSCAN_predicted_peptide_3|196_aa
METNTEKELEEAKEWYRGSPWMSLQTGGTNSIHFIKLQQGFKEAVGVGCLGQHTAHSKDT
HSRSTGYGQETSGNSTAEAVSLLGNQNGVKDNGLERRKWPNGTKILQTTLSTKLYFSFLS
CQNQNAFKATEYREELIVLTPIYSTVFPFAKEKAESGHLPRMGPNTLDDLFQELDKNGDG
EVSFEEFQVLVKKISQ

>gi568815575f:16551007_16754506|GENSCAN_predicted_CDS_3|591_bp
atggagacaaacacagagaaagagctagaagaagctaaagagtggtacagagggagtcct
tggatgtctctacagactggggggaccaacagcatccacttcataaagttgcagcaagga
tttaaggaggccgtgggagttgggtgcctaggtcagcacactgcccatagtaaagatacg
cactcaagaagcacaggctatggtcaggagacctctgggaactcaactgctgaagctgtt
tcactattgggcaaccagaatggtgtgaaagataatggtctggagagaaggaaatggccc
aatggcactaaaatcctgcagacaaccctcagcacaaaactgtacttcagctttttgagt
tgtcaaaatcaaaatgcattcaaggcaacagagtacagagaagagctgatcgtcctcact
ccaatatacagtactgtctttccttttgctaaagaaaaagctgagtcaggacacttgcca
aggatgggtccaaacaccctagatgatctctttcaagaactggacaagaatggagatgga
gaagttagttttgaagaattccaagtattagtaaaaaagatatcccagtga

>gi568815575f:16551007_16754506|GENSCAN_predicted_peptide_4|697_aa
MGGKREESLTEKDFERVEYDQSVLDSATVSDGCSGGASPLGCPPPATGCCKPNQLLKPRN
IPLAGRRRGPDPQRPQRALVAFDSTLRDSQGDVRKSEEHRSRRSPASMTTPPRPRKRHFR
PKAPPLALVLDHCTNPGANPKLTSVSELGQQQGGEGKVGEEGAAHPEARVGGGKIPGAAL
DSPGSDPFPSPTGERQASRGVEPAVPTGHPPRCYHHRAGPALNPGSDCYHSLALTVLELH
RTRSSATILPMKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTF
SPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKT
VQGAHWLDFKFHGNRETDKQNPFSVITLMFIFAYWILVVNHPLWLILGGTIGDIEGMPFV
EAFRQFQFKAKRENFCNIHVSLVPQLSATGEQKTKPTQNSVRALRGLGLSPDLIVCRSST
PIEMAVKEKISMFCHVNPEQVICIHDVSSTYRVPVLLEEQSIVKYFKERLHLPIGDSASN
LLFKWRNMADRYERLQKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSI
DLEKITETEDPVKFHEAWQKLCKAEKMLPETGPNPDPKRGFLDLAQERIQDADSTEFRPN
APVPLSEFCKMMVGLQSACLPATHAHPVVSLLLGTYF

>gi568815575f:16551007_16754506|GENSCAN_predicted_CDS_4|2094_bp
atggggggaaaacgagaagaaagcctgacagaaaaagactttgaaagagtagaatacgat
cagtcagtgctagactcagccaccgtctcggacggctgctcgggtggagcatctccattg
ggctgcccaccgcctgccaccggctgctgcaagcccaaccaactgctcaagccccggaac
atcccgctcgcgggccgccgccgcggtcccgatccccagagaccgcagcgagcactggtt
gcctttgactccactctgcgcgactcccagggagatgtccggaagtcggaggaacaccgc
agccgccgcagccccgcctctatgacgactccgccgcggccgcgcaagcgtcacttccgt
ccaaaggctccgcccctggcgcttgttttggaccattgcacaaacccgggtgcaaacccc
aagctcaccagcgtgagtgagctgggccagcagcagggaggagaggggaaggtgggcgag
gagggcgccgcgcaccccgaggcccgtgtgggcggtgggaagatcccgggggcggctttg
gacagccccggcagcgaccccttccccagcccgacaggtgagcgccaggccagccgcggg
gtggagcccgccgtgcccaccggccaccctccccggtgctaccaccaccgcgcaggcccc
gcactcaaccccggttctgattgttatcatagcttagctttgactgttctagaacttcat
agaacaagatcatcagccactattctgccaatgaagtacatcctggtcacgggtggggtc
atctcaggcattggtaaagggatcattgccagcagcattggaacgattctaaaatcatgt
ggactccgagttactgccataaaaatcgacccctatattaacatcgatgctggcactttt
tcaccttatgaacacggtgaagtcttcgtcttaaatgatggtggagaagttgatttagac
cttggaaattatgaaagatttttggatattaatctttataaagacaacaatatcaccacg
gggaagatatatcagcatgtgatcaataaagagaggcgtggtgattacctggggaaaaca
gtgcaaggagctcattggctggattttaaatttcatggaaacagggaaactgacaaacag
aaccccttctccgttataaccctgatgtttatatttgcttattggatactagtggtcaac
catcctctttggttgattctgggaggcaccattggagacatcgaaggaatgccgtttgtg
gaggcgtttagacaattccagtttaaggcgaaaagagagaatttctgtaatatccacgtt
agccttgtcccacagctcagtgctaccggagaacaaaaaaccaaacccacccaaaacagc
gtccgcgcactgaggggtttaggcctgtctccagatctgattgtctgccgaagttcaacg
cccattgagatggccgtgaaggagaagatttctatgttttgtcacgtgaaccctgaacag
gtcatatgtatccatgatgtttcttccacataccgagttcctgtgcttttagaggaacaa
agcattgtgaaatattttaaggagagattgcacctgcccatcggtgattctgcaagtaat
ttgctttttaagtggagaaatatggctgacaggtatgaaaggttacagaaaatatgctcc
atagccctggttggcaaatacaccaagctcagagactgctacgcctctgtgttcaaagcc
ctggaacactcagccctggccatcaaccacaagttgaatctgatgtacatagactccatt
gatctggagaagatcactgaaaccgaggaccctgtgaaatttcatgaagcttggcagaag
ctatgcaaagctgaaaagatgttaccagaaacgggtcccaatccagaccccaagagaggg
ttcttggatcttgctcaagaaagaattcaggatgctgattccacagagtttaggccaaat
gccccagttcctctgagcgagttctgcaagatgatggttggccttcagtcagcctgtttg
ccagccacccatgcacacccagtcgtgtccctgctgctgggcacctacttctaa