GENSCAN 1.0 Date run: 5-Nov-116 Time: 21:40:47 Sequence gi568815575r:83964280_84287899 : 323620 bp : 36.20% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 20665 20963 299 0 2 60 68 161 0.063 8.04 1.02 Intr + 21287 21365 79 2 1 46 94 48 0.019 -0.17 1.03 Intr + 39235 39442 208 0 1 30 37 196 0.020 6.43 1.04 Intr + 40767 41080 314 1 2 76 103 106 0.802 5.88 1.05 Term + 42429 42716 288 2 0 65 48 178 0.419 5.89 1.06 PlyA + 43068 43073 6 1.05 2.00 Prom + 48886 48925 40 -1.45 2.01 Sngl + 66742 66927 186 0 0 42 42 184 0.820 4.03 2.02 PlyA + 66990 66995 6 1.05 3.26 PlyA - 68088 68083 6 1.05 3.25 Term - 76569 76257 313 2 1 40 43 236 0.217 7.79 3.24 Intr - 79192 79042 151 2 1 78 88 107 0.836 8.00 3.23 Intr - 79995 79876 120 1 0 72 82 38 0.612 1.15 3.22 Intr - 81464 81385 80 1 2 27 71 111 0.196 1.58 3.21 Intr - 100123 100002 122 1 2 54 58 124 0.118 4.37 3.20 Intr - 100832 100692 141 2 0 46 93 98 0.035 5.73 3.19 Intr - 102758 102588 171 2 0 64 14 146 0.005 4.02 3.18 Intr - 115522 115264 259 0 1 95 27 138 0.053 4.94 3.17 Intr - 123429 123354 76 1 1 16 83 51 0.034 -4.95 3.16 Intr - 124269 124161 109 0 1 42 110 69 0.149 3.44 3.15 Intr - 137919 137758 162 0 0 71 51 125 0.860 6.35 3.14 Intr - 140378 140220 159 2 0 89 83 52 0.924 4.06 3.13 Intr - 141597 141508 90 0 0 91 45 88 0.939 4.07 3.12 Intr - 142208 142086 123 2 0 26 67 103 0.784 1.86 3.11 Intr - 142761 142631 131 1 2 3 99 108 0.673 2.89 3.10 Intr - 143446 143344 103 1 1 98 90 64 0.997 6.43 3.09 Intr - 145171 145001 171 1 0 30 92 135 0.550 7.32 3.08 Intr - 155748 155606 143 1 2 41 115 51 0.015 2.25 3.07 Intr - 183844 183763 82 1 1 75 70 43 0.071 -0.51 3.06 Intr - 191912 191796 117 2 0 89 90 112 0.983 11.24 3.05 Intr - 200108 200049 60 2 0 68 103 53 0.192 2.81 3.04 Intr - 223599 223540 60 0 0 60 88 139 0.051 9.11 3.03 Intr - 258697 258572 126 1 0 61 94 117 0.847 9.56 3.02 Intr - 261188 261129 60 2 0 116 109 34 0.980 6.31 3.01 Init - 265029 264877 153 0 0 61 23 101 0.488 0.93 3.00 Prom - 268869 268830 40 -1.45 4.06 PlyA - 269313 269308 6 1.05 4.05 Term - 271331 271191 141 2 0 82 52 122 0.687 4.95 4.04 Intr - 299435 298516 920 0 2 41 44 198 0.009 0.74 4.03 Intr - 302517 301974 544 0 1 -16 77 484 0.025 28.44 4.02 Intr - 310291 310097 195 1 0 77 76 98 0.110 6.19 4.01 Init - 323522 323187 336 2 0 52 68 176 0.172 9.33 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815575r:83964280_84287899|GENSCAN_predicted_peptide_1|395_aa MSTDLLNAQTLPNKCSQRGQRPFSLPTKPLPAATTSTNARTEADGPELTSSPSACQCHHW CKHNMEIASPAPHSMPLSLLILICTWRPAALHPLAAHRSWESKKIKAKEPIQSTASSRLT EHQLIQAELHGIVKAFPDPHKDPIGFAREFELIRTYDPGHSDLYQLVHMLVLEAKAKEWL EKAEWSDPIADLTPEGELLLEFEPGDQKYQIQKRPDIVPQFSTSNVKTSSCDQENKMETE EEILGENKRRWNKHQKTIKLLLASPIFLLTPEVGYLLKDVPSHLWSQSNTDIGKIFSPTQ TSHPRKDLQETPLDNAEIEWYTDGSYIREEDGNFTAGYAVVLLLEVIEASPLPQARSAQA AKLIALTRACQLAKDKTANIYTDSHYGVAHDFGIL >gi568815575r:83964280_84287899|GENSCAN_predicted_CDS_1|1188_bp atgagcacagacctcctcaatgcacaaacattgccaaacaaatgttcacagagaggccag cggcccttctctctgcccaccaagcccctccctgctgccaccaccagcacaaatgcacgc acagaggctgacggccctgagctcaccagctctccatccgcatgccaatgccaccactgg tgtaaacacaacatggagattgccagccctgccccacattccatgccactaagtttactc atattaatttgtacatggaggccagcagccctgcacccactggcggcccaccgcagctgg gaatcaaagaagataaaagcaaaagaacccatccaaagtacagcatcttcaagattgact gaacatcagctcatacaggctgaattacatggcatagttaaagcatttcctgacccccat aaagatccaattgggtttgcccgagaatttgagcttattagaacctatgacccaggtcat tctgacctttatcagctagtccacatgttggtcttagaagctaaagctaaggaatggctg gagaaagcagaatggtcagaccctatagcagacttgactcctgaaggtgaacttttatta gaatttgaaccaggggaccaaaaataccaaattcaaaaacgtcctgacattgttccacag tttagcactagtaatgttaaaacatcatcttgtgaccaggaaaataaaatggagacagag gaggaaattttaggggagaataagagacgctggaataaacatcagaaaacaataaaactc cttttagcttccccaattttcctattaacaccagaagtgggatacttgctcaaggatgtc ccctcccacttatggtctcagtcaaatacagatataggaaaaatattctcacccactcag acttctcaccccaggaaagacctacaagagacaccactggataatgctgagatagaatgg tatacagatgggtcttatataagagaagaggatggaaattttacagcaggatatgctgtg gttttattactagaggtaattgaagccagtcctcttccccaagccagatcagctcaagcg gccaaattgattgccctgacccgagcttgtcaactggcaaaagacaagactgcaaacatt tacactgacagccactatggggttgctcatgactttgggatactatga >gi568815575r:83964280_84287899|GENSCAN_predicted_peptide_2|61_aa MLLNDQCVNEEIKKESEKFLEINEKENPTSQDLCDTAKGVLRDTLIAIEPTSKKKSFTET T >gi568815575r:83964280_84287899|GENSCAN_predicted_CDS_2|186_bp atgcttctgaatgaccagtgtgtcaatgaagaaattaagaaggaaagtgaaaaatttctt gaaataaatgagaaagaaaacccaacatcccaagacctatgtgatacagcaaaaggagta ctaagagatacattaatagctatagagcctacatcaaaaaagaaaagcttcacagaaaca acctaa >gi568815575r:83964280_84287899|GENSCAN_predicted_peptide_3|1093_aa MKSLIYGHKLVKGRLVIGAPTPLELSVMKMEEFTFTWIQIEVPKKKLSHKREYQIKKLST RESTFMRTKNQIVACSIPPLSLFVSLREEHVIEETALHVDLSTLDLRGLETIQDEPWDRE MEVFSGGGASSGEVNGLKMVDEPMEEGEADSCHDEGVVKEIPITHHVKEGYEKADPAQFE LLKVLGQGSFGKVFLVRKKTGPDAGQLYAMKVLKKASLKDFGLSKESVDQEKKAYSFCGT VEYMAPEVVNRRGHSQSADWWSYGVLMGPQDSQIITERSGGGIPMADHMLWGLGSQNGLQ NAYVVEVPRPITGLWGARLSEGLQKLYKREVQPPFKPASGKPDDTFCFDPEFTAKTPKDS PGLPASANAHQLFKGFSFVATSIAEEYKITPITSANVLPIVQINGNAAQFGEVYELKEDI GVGSYSVCKRCIHATTNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVFDDGRY VYLVTDLMKGGELLDRILKQKCFSEREASDILYVISKTVDYLHCQGVVHRDLKPSNILYM DESASADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEEHTGQQQVSIPLGQNSQSKE QIVIFAISQPSPVILPARKTNIQIQEIQRTPVRYSTRRSTTRDALLREEESREAVWLQQL CQAAVGSAQFHFPGGFVYAVRGKLPTQASMMVDAPPPTKLKCPSLTSDCCAGSENFKPVD LSLLGSVGSGPYSASLLQLSGGPLQPLFTLVSPVEAAEQQRLLPTPSCGSSVPERHQPDA SWCSPDLLSHMLHMDPHQRYTAEQILKHSWITHRDQLPNDQPKRNDVSHVVKGAMVATYS ALTHKTFQPVLEPVAASSLAQRRSMKKRTSTGLVLEFQMQEAQRTPELLEDILQEEPHQA GGRKPPASFQAQPPPGNRLRAVVGDMVLVRPALQFVWELEPTQMGRNQKSIPGNMTKQGS KTPPKNHTSSPTMDPNQEEIPDLPEKVFRSLRYFFLAVQEQTNAENWYQEWGIVVKISGN VEAALKLGNGQRLEEFGRLRKRQDDEEKFGTSKRLVMTKMLVVIWTVKARLMRSEMEMRN LLGTGEKITFVIC >gi568815575r:83964280_84287899|GENSCAN_predicted_CDS_3|3282_bp atgaagtcactcatctacggtcacaaattagtaaagggcagacttgttattggagcccct actcctcttgaattatcagtgatgaaaatggaagaatttacctttacctggatccaaata gaagtacccaagaagaagctatctcataagagggaataccaaatcaaaaaactatccaca cgagaaagcaccttcatgagaaccaaaaatcagattgttgcttgcagcatccctccactg agcctatttgtaagccttagagaggaacatgtgattgaggaaactgccctacatgtcgat ctttcaacccttgatctacgtggcttggagaccatccaggacgagccctgggaccgagaa atggaagtgttcagcggcggcggcgcgagcagcggcgaggtaaatggtcttaaaatggtt gatgagccaatggaagagggagaagcagattcttgtcatgatgaaggagttgttaaagaa atccctattactcatcatgttaaggaaggctatgagaaagcagatcctgcacagtttgag ttgctcaaggttcttggtcaggggtcatttggaaaggtttttcttgttagaaagaagacc ggtcctgatgctgggcagctctatgcaatgaaggtgttaaaaaaagcctctttaaaagat tttggactcagcaaggagtcagtagatcaagaaaagaaggcttactcattttgtggtaca gtagagtatatggctcctgaagtagtaaataggagaggccattcccagagtgctgattgg tggtcatatggtgttcttatgggcccacaggattctcagattatcacagaacgctctggt ggtgggattcccatggctgatcacatgctttggggtctgggctctcagaatggcctgcag aatgcttatgtggtcgaagtcccaaggcccatcacaggcctatggggggctaggctctca gaaggcctccagaaattatataaaagagaagttcaacctcctttcaaacctgcttctgga aaaccagatgatactttttgttttgatcctgaatttactgcaaaaacacctaaagattct cccggtttgccagccagtgcaaatgctcatcagctcttcaaaggattcagctttgttgca acttctattgcagaagaatataaaatcactcctatcacaagtgcaaatgtattaccaatt gttcagataaatggaaatgctgcacaatttggtgaagtatatgaattgaaggaggatatt ggtgttggctcctactctgtttgcaagcgatgcatacatgcaactaccaacatggaattt gcagtgaagatcattgacaaaagtaagcgagacccttcagaagagattgaaatattgatg cgctatggacaacatcccaacattattactttgaaggatgtctttgatgatggtagatat gtttaccttgttacggatttaatgaaaggaggagagttacttgaccgtattctcaaacaa aaatgtttctcggaacgggaggctagtgatatactatatgtaataagtaagacagttgac tatcttcattgtcaaggagttgttcatcgtgatcttaaacctagtaatattttatacatg gatgaatcagccagtgcagattcaatcaggatatgtgattttgggtttgcaaaacaactt cgaggagaaaatggacttctcttaactccatgctacactgcaaactttgttgcacctgag gagcatacaggtcagcaacaggtcagtatccccctgggacagaactcccagagtaaggag cagattgtcatctttgctatttcacagccttcaccagtgatacttccagcaagaaagacc aacattcaaattcaagaaatccagagaaccccagtaagatactccaccagaagatcaacc acaagagatgctctgcttagagaggaggaatctagagaggcagtctggctgcagcagctt tgccaagctgcagtgggctctgcccagtttcactttccgggtggctttgtttacgctgtc aggggaaaactgcctactcaagcctcaatgatggtggacgcccctccccccaccaagctc aagtgtccaagtttgacttcagactgctgtgctggcagcgagaatttcaagccagtggat cttagcttgctgggctctgtggggtctggcccctattctgcaagtctgctgcagctttct ggaggtccactccagcccctgttcaccttggtatcaccagtggaggctgcagaacagcaa agattgcttcctactccttcctgtggaagctccgtcccagagcggcaccagcctgatgcc agctggtgctctcctgatttgctttcccatatgcttcatatggacccacatcagcggtat actgctgaacaaatattaaagcactcatggataactcacagagaccagttgccaaatgat cagccaaagagaaatgatgtgtcacatgttgttaagggagcaatggttgcaacatactct gccctgactcacaagacctttcaaccagtcctagagcctgtagctgcttcaagcttagcc cagcgacggagcatgaaaaagcgaacatcaactggcctagttttagaattccagatgcaa gaagctcagagaacacctgaactcctggaagatatattgcaagaagaacctcatcaagct gggggcagaaagcctccggcaagttttcaagcccaacctccacctggaaacagactcagg gctgttgtgggtgacatggtgttagtaagaccagcccttcagtttgtgtgggagctggaa cctacccaaatgggaaggaaccagaaaagcatccctggtaatatgacaaaacaaggctca aaaacaccccccaaaaatcacactagttcaccaacaatggatccaaaccaagaagaaatt cctgacttgcctgaaaaagtattcaggagtctcaggtatttctttttagcagtgcaagaa cagactaatgcagaaaattggtaccaggagtggggcattgttgtaaagatatctggaaat gtggaagcagctttgaaactgggtaatgggcagaggttggaagagtttggaaggctcaga aaaagacaggatgatgaggaaaaatttggaacttccaagagacttgttatgaccaaaatg ctggtagtgatatggacagtaaaggccagactgatgaggtctgagatggaaatgaggaac ttattgggaactggagaaaagattacttttgttatatgttag >gi568815575r:83964280_84287899|GENSCAN_predicted_peptide_4|711_aa MLDKLSALQSSSSWLENTSTFLQSSDNGLNNTSYVLQSSGSESDNITAWPSGGGLGRKTA TACKRHAVYVAFSLNTPPPTPITSTRQPSFNSKRRDSFSCMVHVPQDGPGAQAWRPRRKK WFHGSGPVSPCFVQPKDLVPCIQAYVAMAERGQCRSWAMASEGASPKPWQLPRGIEPEDI RTHRKEAKNLEKRLDEWLTRINSVEKTLNDLMELKTMAQELRDTCTSLSSRFDQVEERAS VIEDQMNEMKREEKFREKRVKRNEQSLQDIWDYVKRPSLRLIGVPESNGDNGTKLENTLQ DIIQENFPNLARQANIQIPEIQRTPQRYSLRRATPRHIIVRFTKVEMKEKMLRAAKEKAD KQLQQSLRIQNQCAKIISIPIQQEKTESQIMSELPFTIASKRIKYLGIQLTRDMKDLFKE NYKPLLNEIKEDTNIWKNIPCSWIGRINIVKIAILPKVIYRFNAIPIKLPMTSFTELEKT TLKFIWNQKRAHIAKSILSQKNKAGGITLPDLNLYYKATVTKTAWYWYQNRDIDQWNRTE PSEIIPHIYNHLIFDKPDKNKQWGNDSLFNKWCWENWLSICRRLKLDPFLTPYKKINSRW IKDLNVRPKTIKTLEENLGNTIEDIGMGKDFMTKTPKAMKTKAKIEKWDLIKLKSFCTAK ETTIRSFGSEQKSHTLVRATRLVSDHSQSFEAWLQFLGDTRFGTQKLRDSD >gi568815575r:83964280_84287899|GENSCAN_predicted_CDS_4|2136_bp atgctggacaagctatctgccttacagtccagcagcagctggctggaaaatacatctact ttcctacagtccagtgacaacgggctgaacaacacatcttacgttctacagtccagtggc agtgagtcagacaacataactgcatggcccagtggtggtgggctaggaaggaaaactgca actgcctgcaaacgtcatgcagtttatgtagcattttcacttaataccccacccccaaca cctataacctccacccggcaaccttcatttaactcaaaacgcagggactcattctcctgt atggtccatgttccacaggatgggccaggggctcaggcttggagacctaggaggaaaaaa tggtttcatgggtcaggcccagtgtccccatgctttgtgcagcctaaagacttggtgccc tgcatccaagcctatgtagccatggctgaaaggggccaatgtagatcttgggccatggct tcagagggtgcaagccccaagccttggcaactcccacgtggtattgagcctgaggatatt cgaacccatcgcaaggaagctaaaaaccttgaaaaaagattagacgaatggctaactaga ataaacagtgttgagaagaccttaaatgacctgatggagctgaaaaccatggcacaagaa cttcgtgacacatgcacaagcctcagtagccgatttgatcaagtggaagaaagggcatca gtgattgaagatcagatgaatgaaatgaagagagaagagaagtttagagaaaaaagggta aaaagaaatgaacaaagcctccaagacatatgggactatgtgaaaagaccaagtctacgt ctgattggtgtacctgaaagtaacggggataatggaaccaagctggaaaacactctgcag gatattatccaggagaacttccccaacctagcaaggcaggccaacattcaaattccagaa atacagagaacaccacaaagatactccttgagaagagcaaccccaagacacataattgtc agattcaccaaggttgaaatgaaggaaaaaatgttaagggccgccaaagagaaagctgat aagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcataagcattcct atacagcaagaaaagacagagagccaaatcatgagtgaactcccattcacaattgcttca aagagaataaaatacctaggaatccaacttacaagggacatgaaggacctcttcaaggag aactacaaaccactgctcaatgagataaaagaggacacaaacatatggaagaacattcca tgctcatggataggaagaatcaatattgtgaaaatagccatactgcccaaggtaatttat agatttaatgccatccccatcaagctaccaatgacttccttcacagaattggaaaaaact actttaaagttcatatggaaccaaaaaagagcccatattgccaagtcaatcctaagccaa aagaacaaagctggaggcatcaccctacctgacctcaacctatactacaaggctacagta accaaaacagcatggtattggtaccaaaacagagatatagaccaatggaacagaacagag ccctcagaaataataccacacatctacaaccatctgatctttgacaaacctgacaaaaac aagcaatggggaaatgattccctatttaataaatggtgctgggaaaactggctatccata tgtagaaggctgaaactggatcccttccttacaccttataaaaaaattaattcaagatgg attaaggacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaat accattgaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatgaaa acaaaagccaaaatagagaaatgggatctaattaaactaaagagcttctgcacagcaaaa gaaactacaatcagaagttttggcagtgaacagaagtctcacacccttgtgagggccact aggctggtttctgatcacagccagtcatttgaagcatggctgcaatttctaggggacacc aggtttggcactcagaaactcagagactcagattga