GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:22:44

Sequence gi568815584r:46551095_46751736 : 200642 bp : 35.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    695    758   64  2  1  103   84    48 0.606   3.70
 1.02 Term +    779    895  117  1  0   62   33   124 0.868   1.86
 1.03 PlyA +   1406   1411    6                               1.05

 2.07 PlyA -   1942   1937    6                               1.05
 2.06 Term -   7671   7631   41  1  2   54   48    60 0.056  -5.03
 2.05 Intr -  14643  14546   98  2  2   93   78    86 0.379   6.83
 2.04 Intr -  30760  30652  109  2  1   71   76   115 0.284   7.02
 2.03 Intr -  64108  64023   86  0  2   76   97    37 0.027   1.94
 2.02 Intr -  85715  85533  183  1  0   40   62   137 0.054   4.28
 2.01 Init - 100642 100050  593  1  2  108   70   749 0.005  69.85
 2.00 Prom - 100720 100681   40                              -3.15

 3.00 Prom + 102384 102423   40                              -2.15
 3.01 Init + 107649 107711   63  2  0   91   59   -14 0.440  -2.80
 3.02 Intr + 110798 110848   51  1  0  112   82    25 0.720   2.49
 3.03 Intr + 112442 112613  172  1  1   61   57   117 0.049   4.49
 3.04 Intr + 119051 119143   93  0  0   38   80    71 0.043   0.32
 3.05 Term + 126885 127861  977  1  2   71   42   161 0.081   1.03
 3.06 PlyA + 128402 128407    6                               1.05

 4.02 PlyA - 129009 129004    6                               1.05
 4.01 Sngl - 135425 135102  324  2  0   72   38   183 0.858   7.45
 4.00 Prom - 141266 141227   40                              -3.65

 5.00 Prom + 153544 153583   40                              -3.75
 5.01 Init + 155050 155120   71  0  2   29   98    72 0.336   2.87
 5.02 Intr + 166356 166489  134  0  2   26   94    92 0.263   2.97
 5.03 Intr + 176331 176468  138  1  0   51   94    55 0.026   1.91
 5.04 Term + 182536 182546   11  2  2  135   31     0 0.066  -3.62
 5.05 PlyA + 183198 183203    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 100642  99998  645  1  0  108   49   771 0.988  71.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:46551095_46751736|GENSCAN_predicted_peptide_1|60_aa
XYTDGFSFFQNSKAACVLRSLQISPSTHVVNRNLQLKPYFITDAFLDPFNLVNYTCNMVT

>gi568815584r:46551095_46751736|GENSCAN_predicted_CDS_1|183_bp
nnctacactgacggcttctcgttcttccagaactctaaagccgcctgtgtcctccgttct
ctacagatttctccttccactcacgttgttaaccgcaatcttcagctcaaaccctatttt
ataacagatgccttcctggaccctttcaacttggtgaactacacctgcaatatggtcaca
tag

>gi568815584r:46551095_46751736|GENSCAN_predicted_peptide_2|369_aa
MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQL
SSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
KPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADE
FEDMVAKKCLIPDGCGVNDYTNSPAMILNEAEMAEMTDIEFRIWLATKITEIQEVVETQS
KESKESVKQIQSNDTRAERLIQQISEKYLVHCQTVDKKPNLTLSPELETIKLHIIMQQRF
QPVPGEDTTPGHQEATLPSPDRAGFVLYQCPTLLTGNCLLDLWEVHQQEAPVEIGRGFEA
STAEKLPVP

>gi568815584r:46551095_46751736|GENSCAN_predicted_CDS_2|1110_bp
atggggcgccgtccagctcgctgttaccggtattgtaagaacaagccgtacccaaaatct
cgtttctgccgaggggttcctgatgccaagatccgcatctttgacctgggtagaaagaag
gcaaaagtggatgagttcccactcggtggccacatggtgtctgatgaatatgagcagctg
tcttctgaagccctggaggccgcccgtatttgtgccaacaaatacatggtgaaaagttgt
ggcagagatggctttcacatgcgagtgcggctccatcccttccatgtcatccgcatcaac
aagatgttgtcctgtgctggggctgacaggctccagacaggtatgcgaggtgcctttgga
aaaccccagggtactgtagcccgggtccacattggtcaagtcatcatgtccatccgcacc
aagcttcagaacgaggagcatgtgattgaagccttgcgcagggccaagttcaagttccct
ggacgccagaagattcatatctccaagaagtggggcttcacgaagtttaatgctgacgaa
tttgaagacatggtggccaagaagtgcctcatccctgatggttgtggagtcaatgactat
actaactcccctgcaatgattcttaatgaggctgaaatggctgaaatgacagacatagaa
ttcagaatctggttggcaacgaagatcactgagattcaggaggtagttgaaacccaatcc
aaagaatctaaggaatcagtaaaacaaatccagtcaaatgatacaagggctgaaagatta
atacagcaaatctcagagaaatatcttgtccactgtcaaacagttgataagaagccaaac
ctgactttgagcccagaacttgagaccatcaagcttcacatcatcatgcaacaaaggttc
cagccagttccaggtgaagacaccacccctggccatcaagaagctaccttgccttcacca
gacagagcaggatttgttctctaccaatgccctacactgctaacaggaaactgccttctg
gatttgtgggaagttcaccagcaggaagcgccagtggaaattgggaggggctttgaagct
agtacagcagaaaaactgcctgttccatga

>gi568815584r:46551095_46751736|GENSCAN_predicted_peptide_3|451_aa
MKIPESKALLILLKVNFISEQIHGCCESRQATTRGADWHHADSSWRSSQEIVQSLNGLGC
GWPLKQLLWLALHQGLPHCLEAVVLEAVWAQDFIAVHMLLKEGELGSSVIEQMSVWSSLL
KEVGLTELEKTTLKFIWNQKRACIAKSILSQKKKAGGITLPDLKLYYKATVTKTAWYCYQ
NRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKKWGKDSLFNKWCWENWIAICRKLKLDPF
LTPYTKINSRWIKDLYVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWD
LIKLKSFCTAKETTIRVNRQPTEWEKVFATYSSDKGLISRIYNELKQIYKKKTNNPIKKW
AKDMNRHFSKEDIYAAKKDMKKCSSSLAIREMEIKTTMRYHLTPVRMAIIKKSGNNRCWR
GCGGIGTHLHCWWDCKLVQPLWNRCGDSSGI

>gi568815584r:46551095_46751736|GENSCAN_predicted_CDS_3|1356_bp
atgaagattcctgaatccaaggctttattaattttgttaaaagttaattttatttctgag
cagatccatggctgctgtgaaagcaggcaagcaaccactaggggggctgactggcaccat
gcagactcaagctggcggtcatcccaggaaattgtccagagtctcaacggccttggctgt
ggatggcctctaaaacagttgctgtggcttgccctgcaccagggactccctcactgcctg
gaagctgtggtgttggaggctgtctgggcccaggattttattgctgtgcacatgctgcta
aaggaaggagaacttggttcttctgtcatagagcagatgagcgtttggtcatccctatta
aaagaagttggactgacagaattggaaaaaactactttaaagttcatatggaatcaaaaa
agagcctgcattgccaagtcaatcctaagccaaaagaagaaagctggaggcatcacgcta
cctgacctcaaactatactacaaggctacagtaaccaaaacagcatggtactgttaccaa
aacagagatatagaccaatggaacagaacagagccctcagaaataatgccgcatatctac
aactatctgatctttgacaaacctgacaaaaacaagaaatggggaaaggactccctattt
aataaatggtgctgggaaaactggatagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaattaattcaagatggattaaagacttatatgttagacctaaa
accataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaag
gacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctgcacagcaaaagaaaccaccatcagagtgaacaggcaa
cctacagaatgggagaaagtttttgcaacctactcatctgacaaagggctaatatccaga
atctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgg
gcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaagacatg
aaaaaatgctcatcatcactggccatcagagaaatggaaatcaaaaccacaatgagatac
catctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggaga
ggatgtggcggaataggaacacatttacactgttggtgggactgtaaactagttcaaccc
ttgtggaatcggtgtggtgattcctcagggatctag

>gi568815584r:46551095_46751736|GENSCAN_predicted_peptide_4|107_aa
MTSENGLSKSPATDPGERKMCDLSYREYKTDALRKLNELHENTEKQFRNLSEKVFKDGNN
FKINQTKILELKNTTDEGKNASQCLKSRTDQAEERINELNHRLLENT

>gi568815584r:46551095_46751736|GENSCAN_predicted_CDS_4|324_bp
atgacctcagaaaatggactcagtaagtcaccagcaacagaccctggagagagaaagatg
tgtgacctctcgtacagggaatacaaaacagatgctttgcggaagctcaatgaacttcat
gaaaacacagaaaagcaatttagaaatttatcagagaaagtttttaaagatggaaataac
tttaaaataaatcaaacaaaaatcctggagctgaaaaatacaactgatgaagggaaaaat
gcatcacagtgtctcaaaagcagaactgatcaagcagaagaaagaattaatgagctcaat
cacaggctacttgaaaatacatag

>gi568815584r:46551095_46751736|GENSCAN_predicted_peptide_5|117_aa
MDHGWTKKGKNYGKIDAERADKKQNTGDWIIYKEKKCILAPGSADCLRSMAPASASGEVL
KRILLMVEGCLFTLMVVSFAVQKLFSLIRSHFPGASVTPFFDSERELPDPLRFPATT

>gi568815584r:46551095_46751736|GENSCAN_predicted_CDS_5|354_bp
atggatcacggatggaccaaaaaagggaagaattatggaaaaatagatgccgagagagca
gacaagaaacagaataccggagactggataatttataaagaaaagaagtgtattttggct
cctggttccgcagactgtttaagaagcatggcaccagcatctgcttctggtgaggttctc
aaaaggattttactcatggtagaaggttgcctgttcactctgatggtagtttcttttgct
gtgcagaagctctttagtttaattagatcccattttccaggtgcgtccgtcacccctttc
tttgactcggaaagggaactccctgaccccttgcgcttcccagctaccacttaa