GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:02:23

Sequence gi568815596r:25061084_25264772 : 203689 bp : 49.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    412    407    6                               1.05
 1.01 Sngl -  20227  19715  513  1  0   66   45   353 0.993  24.84
 1.00 Prom -  23576  23537   40                              -3.46

 2.00 Prom +  25904  25943   40                              -5.36
 2.01 Init +  27903  27950   48  2  0  107   46    70 0.591   3.73
 2.02 Intr +  30163  30318  156  0  0   98   90    19 0.327   3.31
 2.03 Intr +  31920  32047  128  2  2   91  106   204 0.157  21.98
 2.04 Intr +  42554  42704  151  2  1  102   99   301 0.250  32.76
 2.05 Intr +  60590  60711  122  1  2   86   89   194 0.993  18.59
 2.06 Intr +  65201  65248   48  2  0   99   85    29 0.703   1.50
 2.07 Intr +  67100  67249  150  2  0  100   99   119 0.955  13.48
 2.08 Intr +  68892  69026  135  0  0   97   84   140 0.999  14.18
 2.09 Intr +  69469  69547   79  1  1   86   80    58 0.999   4.35
 2.10 Intr +  70285  70420  136  0  1   96   82   261 0.806  26.44
 2.11 Intr +  70667  70828  162  0  0   73   41   425 0.997  36.25
 2.12 Intr +  71820  71931  112  1  1  109   72   145 0.985  14.44
 2.13 Intr +  72300  72351   52  0  1   76   99     8 0.969  -0.39
 2.14 Intr +  74384  74556  173  1  2   89   66   224 0.997  19.04
 2.15 Intr +  75440  75515   76  2  1   26   92   137 0.729   7.42
 2.16 Intr +  76258  76419  162  0  0   97   75   394 0.989  39.17
 2.17 Intr +  77976  78107  132  2  0   64   73   181 0.991  15.04
 2.18 Intr +  80283  80350   68  2  2   68   94    62 0.994   2.50
 2.19 Intr +  82652  82779  128  2  2  114   80   152 0.999  17.32
 2.20 Intr +  83877  83968   92  1  2   94  105    91 0.983  11.11
 2.21 Intr +  88611  88659   49  2  1  121  111    80 0.998  11.85
 2.22 Intr +  90816  90937  122  1  2   18  114   227 0.921  18.51
 2.23 Intr +  92629  92678   50  0  2  103  131    48 0.977   8.08
 2.24 Term +  93152  93257  106  2  1  120   38    47 0.905   0.78
 2.25 PlyA +  95091  95096    6                               1.05

 3.05 PlyA -  95213  95208    6                              -0.45
 3.04 Term -  95986  95834  153  1  0  109   48   114 0.966   7.42
 3.03 Intr -  96289  96166  124  0  1   99   84    21 0.628   3.39
 3.02 Intr - 100669 100002  668  1  2  107   44  1411 0.102 129.13
 3.01 Init - 103689 103558  132  0  0   74   92   210 0.990  18.14
 3.00 Prom - 105829 105790   40                              -5.76

 4.04 PlyA - 106225 106220    6                               1.05
 4.03 Term - 107346 107239  108  0  0   52   37    94 0.099  -0.79
 4.02 Intr - 107986 107844  143  2  2   98   93    44 0.033   5.97
 4.01 Init - 143511 143322  190  0  1   95   58   144 0.382   9.31
 4.00 Prom - 162790 162751   40                              -4.56

 5.21 PlyA - 163100 163095    6                               1.05
 5.20 Term - 169084 168976  109  0  1  115   44    81 0.732   4.38
 5.19 Intr - 173337 173200  138  2  0  146   47    94 0.810  10.68
 5.18 Intr - 174742 174624  119  1  2   73   75    67 0.900   3.16
 5.17 Intr - 175922 175853   70  1  1   96   82    48 0.791   4.18
 5.16 Intr - 178132 178047   86  1  2   91   77    72 0.821   5.02
 5.15 Intr - 179405 179219  187  1  1   68   65   213 0.600  16.69
 5.14 Intr - 179647 179553   95  1  2   94   49   139 0.582   9.36
 5.13 Intr - 180624 180479  146  1  2   52   50   273 0.960  19.90
 5.12 Intr - 182899 182815   85  1  1   63   94    60 0.960   3.49
 5.11 Intr - 183255 183072  184  2  1  104   59   202 0.996  18.69
 5.10 Intr - 183569 183457  113  2  2   83   94   254 0.999  24.68
 5.09 Intr - 184249 184170   80  2  2  114   97    60 0.999   8.77
 5.08 Intr - 184981 184937   45  2  0  133  110   129 0.999  17.98
 5.07 Intr - 185226 185077  150  1  0  110   53   265 0.984  25.33
 5.06 Intr - 185693 185537  157  2  1  100   94   255 0.999  26.88
 5.05 Intr - 186075 185968  108  0  0   82  109   222 0.782  24.18
 5.04 Intr - 186666 186508  159  0  0   78  103   125 0.999  13.18
 5.03 Intr - 187169 186954  216  2  0  105   83   280 0.974  27.90
 5.02 Intr - 193770 193630  141  0  0   40  100    85 0.914   5.45
 5.01 Init - 199773 199675   99  0  0  114  101    77 0.930  11.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100669  99998  672  1  0  107   55  1437 0.898 136.06
S.002 Init + 104495 104639  145  1  1   54   70   114 0.867   6.48
S.003 Term + 104696 104826  131  0  2   92   43   107 0.917   4.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:25061084_25264772|GENSCAN_predicted_peptide_1|170_aa
MKAQVSADGRGKGTFESGLKGGVKIVFSPEEAKAVSSEMIGKKLFTKQMGEKGGICNQAL
KRKYPRGEDYFAIGMERSFQGPILIGSSHGGVNIADVAAETPDAIKEPVDIVEGIKKEQA
LRLEQKMGFPPNIVDSAAENMVKLYSLFLKYDATMIRNKSNGEDSDGAVL

>gi568815596r:25061084_25264772|GENSCAN_predicted_CDS_1|513_bp
atgaaggcgcaggtttcagctgatggtcgaggaaaaggaacatttgaaagtggcctcaaa
ggaggagtgaagatagttttctctccagaagaagcaaaagctgtttcctcagaaatgatt
gggaaaaagttgtttaccaagcaaatgggagaaaagggtggaatatgcaatcaagcactg
aagcgaaaataccctaggggagaagactactttgcaatagggatggagaggtcatttcaa
ggtcctatattaataggaagttcacatggtggtgtcaacattgcagatgttgctgctgag
actcctgatgcaattaaagaacctgttgatattgtagaaggcatcaaaaaggaacaagct
ctccggcttgaacagaagatgggatttccacctaatattgtggattccgcagcagaaaac
atggtcaagctttacagcctttttctgaaatatgatgcaaccatgataagaaataaatcc
aatggtgaagattcagatggagctgtgctgtga

>gi568815596r:25061084_25264772|GENSCAN_predicted_peptide_2|878_aa
MGPVWWRLLEASVLGKAALALAPTFPGPDQEALLTVFPILIPGVCGCCGALRPRYKRLVD
NIFPEDPEDGLVKTNMEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEAL
DQLLMACHCQSINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYD
FFVSRFSEMCHSSHDDLEIKTKLNQYFHPSLLSICDYRIRMSGIKGLQGVVRKTVNDELQ
ANIWDPQHMDKIVPSLLFNLQHVEEAESRSPSPLQAPEKEKESPAELAERCLRELLGRAA
FGNIKNAIKPVLIHLDNHSLWEPKVFAIRCFKIIMYSIQPQHSHLVIQQLLGHLDANSRS
AATVRAGIVEVLSEAAVIAATGSVGPTVLEMFNTLLRQLRLSIDYALTGSYDGAVSLGTK
IIKEHEERMFQEAVIKTVGSFASTLPTYQRSEVILFIMSKVPRPSLHQAVDTGRTGENRN
RLTQIMLLKSLLQVSTGFQCNNMMSALPSNFLDRLLSTALMEDAEIRLFVLEILISFIDR
HGNRHKFSTISTLSDISVLKLKVDKCSRQDTVFMKKHSQQLYRHIYLSCKEETNVQKHYE
ALYGLLALISIELANEEVVVDLIRLVLAVQDVAQVNEENLPVYNRCALYALGAAYLNLIS
QLTTVPAFCQHIHEVIETRKKEAPYMLPEDVFVERPRLSQNLDGVVIELLFRQSKISEVL
GGSGYNSDRLCLPYIPQLTDEDRLSKRRSIGETISLQVEVESRNSPEKEERVPAEEITYE
TLKKAIALCVEVDSVAVEEQERERRRQVVEKFQKAPFEEIAAHCGARASLLQSKLNQIFE
ITIRPPPSPSGTITAAYGQPQNHSIPVYEMKFPDLCVY

>gi568815596r:25061084_25264772|GENSCAN_predicted_CDS_2|2637_bp
atgggccctgtgtggtggcggctcctggaggcctctgtgctggggaaggctgccctggcc
ctggctccaacctttcctgggcccgaccaggaggctttgctcacagtttttcccattctt
attccaggtgtgtgtggctgctgtggtgccctacgccccaggtacaaaaggctggttgac
aacatcttccctgaggatcccgaggatggtctggtgaagaccaacatggagaagctgacc
ttctatgccctctcagctccagaaaaacttgatcgtattggcgcctacctctctgagagg
ctcatccgtgacgtgggtcgccatcgatatgggtacgtgtgcattgctatggaggctttg
gaccagctgctcatggcctgccactgccagagcatcaacctcttcgtggagagcttcctc
aagatggtggccaagctgctggagtcagagaaacccaacctgcagatcctcggcaccaac
tcgtttgtgaagtttgccaacatcgaggaggacaccccgtcctatcaccggagctatgac
ttctttgtgtcccgattcagtgaaatgtgccactcgagccatgatgacttagaaatcaag
accaagctcaatcagtacttccaccccagcctcctgagtatctgtgactacagaattcga
atgtcaggcatcaaaggcctgcaaggggtggtgaggaagacggtgaatgatgaactgcag
gccaatatctgggacccacagcacatggataagatcgttccatcactgcttttcaatcta
cagcatgtagaggaggcagagagccggtctccctcacccctccaagcacctgagaaggag
aaagagagccccgcggagctggctgagaggtgtcttcgggagctgctgggccgggctgcc
tttggcaacatcaaaaacgccatcaagcctgttctcatccatctggataaccattctctt
tgggaacccaaggtgtttgccatccgttgctttaaaatcatcatgtactcaattcagccg
cagcactcacacctggtcatccagcagctcctgggccacctggacgccaacagccgcagc
gctgcgacggtgcgcgcgggcatcgtggaagtcttgtcggaagccgcggtcatcgctgcc
accggctctgtggggcccacagtactggagatgttcaacacgctgctgaggcagctgcgg
ctcagcatcgactacgcgctgaccgggagctacgacggggcggtcagcctcggcaccaag
atcatcaaggagcacgaggagcgcatgttccaggaggccgtcatcaagaccgtgggctcc
tttgccagcacgctgcccacctaccagcgctccgaggtgatcctcttcatcatgagcaag
gtcccgcggccatccctgcaccaggcggtggacacaggcaggacgggggagaataggaac
cgtctgacccagattatgctgctaaaatccctcctgcaggtatccacaggtttccagtgc
aacaacatgatgtcagccctgcctagcaacttcctggaccgccttctctccaccgccctc
atggaggatgcagaaattcgactctttgttctagagattctcatcagtttcattgatcgt
catggcaaccgccacaagttctctaccatcagtaccctcagtgacatctctgtcctgaag
ctgaaagtggacaagtgctctcgacaggacaccgtcttcatgaagaagcactcccagcag
ctctacagacacatctacctgagctgcaaggaggaaacaaacgtgcagaaacactacgag
gcgctctatggcttgctggccctcatcagcatcgagctggctaacgaggaggtggtggtg
gacctcatccgtctggtgctggctgttcaggacgtggcccaagtcaatgaggagaacttg
cctgtctacaaccgctgtgccctctatgctctgggcgcagcctacctgaacctcatcagt
cagctcacaacagtgcctgccttctgccagcacatccatgaggtgatagagaccaggaag
aaagaggctccatacatgctccccgaggatgtgtttgtggagaggcccaggctgtctcag
aatcttgatggggtggtcattgagctcctcttccgccagagcaagatcagtgaagtcctg
ggaggcagtggctacaactcggaccggctctgcctgccctacattcctcagctgacagat
gaggatcgtttatccaagaggaggagcattggagagaccatctccctgcaggtggaggta
gaatcgaggaacagtccggagaaggaggagcgagtgcctgccgaggagatcacctatgag
acactgaagaaagccattgctctctgtgtcgaagtggacagcgtagcagtggaggagcag
gagcgtgagcggcggcggcaggtggtggagaagttccagaaggcacccttcgaggagatt
gctgcacactgcggggcccgggcatcgctgctccagagcaaactcaatcagatctttgaa
atcaccatccggcccccaccaagcccatcaggaaccatcactgcagcctacggtcagccg
cagaaccactccatccccgtctatgaaatgaagtttcccgatctgtgtgtatactga

>gi568815596r:25061084_25264772|GENSCAN_predicted_peptide_3|358_aa
MPRSCCSRSGALLLALLLQASMEVRGWCLESSQCQDLTTESNLLECIRACKPDLSAETPM
FPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQKREDVSAGEDCGPLPEGG
PEPRSDGAKPGPREGKRSYSMEHFRWGKPVGKKRRPVKVYPNGAEDESAEAFPLEFKREL
TGQRLREGDGPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRMEHFRWGSPPKDKRYGGF
MTSEKSQTPLVTLFKNAIIKNAYKKGEACAGVRRLPTITLTFTFPILAYLARIQVLLHVS
RQPNTLLSDGDEGQKHLGISGSNAGSGKMLQGGDCQVPEPGLTGSAQDEAATGNPNVK

>gi568815596r:25061084_25264772|GENSCAN_predicted_CDS_3|1077_bp
atgccgagatcgtgctgcagccgctcgggggccctgttgctggccttgctgcttcaggcc
tccatggaagtgcgtggctggtgcctggagagcagccagtgtcaggacctcaccacggaa
agcaacctgctggagtgcatccgggcctgcaagcccgacctctcggccgagactcccatg
ttcccgggaaatggcgacgagcagcctctgaccgagaacccccggaagtacgtcatgggc
cacttccgctgggaccgattcggccgccgcaacagcagcagcagcggcagcagcggcgca
gggcagaagcgcgaggacgtctcagcgggcgaagactgcggcccgctgcctgagggcggc
cccgagccccgcagcgatggtgccaagccgggcccgcgcgagggcaagcgctcctactcc
atggagcacttccgctggggcaagccggtgggcaagaagcggcgcccagtgaaggtgtac
cctaacggcgccgaggacgagtcggccgaggccttccccctggagttcaagagggagctg
actggccagcgactccgggagggagatggccccgacggccctgccgatgacggcgcaggg
gcccaggccgacctggagcacagcctgctggtggcggccgagaagaaggacgagggcccc
tacaggatggagcacttccgctggggcagcccgcccaaggacaagcgctacggcggtttc
atgacctccgagaagagccagacgcccctggtgacgctgttcaaaaacgccatcatcaag
aacgcctacaagaagggcgaggcctgtgctggggtgaggagattacctactatcacactc
accttcacctttccgattctggcctatttggccagaatccaggttctactccatgtcagc
agacaacccaacactctactgagtgatggggatgaggggcagaaacatctggggatctca
ggttctaatgctggctctggaaagatgctccagggaggcgactgccaagtcccagaacca
gggctcacaggcagtgctcaggatgaagctgccacggggaaccctaatgttaagtag

>gi568815596r:25061084_25264772|GENSCAN_predicted_peptide_4|146_aa
MRARGFLENRAASAHPAGALELQEAISRRHRIRPNAVARPLRPSEPGGEALGAAPQGSRA
IAALEQREYDSPRLPHHSFQTMGKSEASPCADGDIYRQMRTRQMPAPARTQSAGSGSEGG
PGRLWLSAVPSSRQTFCADCGMRSRQ

>gi568815596r:25061084_25264772|GENSCAN_predicted_CDS_4|441_bp
atgagggcgcgcggctttcttgaaaacagagcagcctctgctcaccctgcaggcgctctg
gagctgcaggaggccatttctagaaggcaccggattcggcctaatgcggtggcgaggccg
ctgcgtccctcggagcccggtggggaggccctgggtgccgcgccccaaggctcgcgggcg
attgccgccctggaacagagagaatatgattccccacgacttccacatcacagtttccaa
acaatggggaaatcggaggcctccccgtgtgcagacggtgatatttaccgccaaatgcga
accaggcagatgccagccccagcacgcacgcagtcggccggctccggctccgaaggcgga
cctgggcgcctctggctctccgcggtcccgagttctcgacaaactttctgcgccgactgc
ggcatgagaagccgccagtag

>gi568815596r:25061084_25264772|GENSCAN_predicted_peptide_5|828_aa
MPSVEPFLTSINSLRPPRILHLSVRTPSQANCMSYVPRPQNVESKVFSRIIMEERVSYMR
QCLQKATKPEPETSFERRPEAEKKAKVIAGMNAVEENQGPGESQKVEEASPPAVQQPTDP
ASPTVATTPEPVGSDAGDKNATKAGDDEPEYEDGRGFGIGELVWGKLRGFSWWPGRIVSW
WMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSFCSAFHQATYNKQPMYRKAIYEVL
QVASSRAGKLFPVCHDSDESDTAKAVEVQNKPMIEWALGGFQPSGPKGLEPPEEEKNPYK
EVYTDMWVEPEAAAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDI
CISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNN
CCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNH
DQEFDPPKVYPPVPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVG
MVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYGRQPQLMAF
SSDLSEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVSDKRDISRFLESNPVM
IDAKEVSAAHRARYFWGNLPGMNRPLASTVNDKLELQECLEHGRIAKFSKVRTITTRSNS
IKQGKDQHFPVFMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIR
HLFAPLKEYFACVPQRLLAIEHPIGKQTFQESTRDLLAFETGLGVIDW

>gi568815596r:25061084_25264772|GENSCAN_predicted_CDS_5|2487_bp
atgccctctgtggagccctttctgacttccatcaactccctgcgaccaccccgcatcctt
cacctctcagtccgcactccctcccaggccaactgcatgtcttatgtcccaagaccacag
aatgtggagtctaaggtgtttagccgcattataatggaagagcgggtatcgtacatgaga
cagtgtctgcaaaaggccaccaagccagaaccagaaacttcttttgagaggaggcctgaa
gctgagaagaaagccaaggtcattgcaggaatgaatgctgtggaagaaaaccaggggccc
ggggagtctcagaaggtggaggaggccagccctcctgctgtgcagcagcccactgacccc
gcatcccccactgtggctaccacgcctgagcccgtggggtccgatgctggggacaagaat
gccaccaaagcaggcgatgacgagccagagtacgaggacggccggggctttggcattggg
gagctggtgtgggggaaactgcggggcttctcctggtggccaggccgcattgtgtcttgg
tggatgacgggccggagccgagcagctgaaggcacccgctgggtcatgtggttcggagac
ggcaaattctcagtggtgtgtgttgagaagctgatgccgctgagctcgttttgcagtgcg
ttccaccaggccacgtacaacaagcagcccatgtaccgcaaagccatctacgaggtcctg
caggtggccagcagccgcgcggggaagctgttcccggtgtgccacgacagcgatgagagt
gacactgccaaggccgtggaggtgcagaacaagcccatgattgaatgggccctggggggc
ttccagccttctggccctaagggcctggagccaccagaagaagagaagaatccctacaaa
gaagtgtacacggacatgtgggtggaacctgaggcagctgcctacgcaccacctccacca
gccaaaaagccccggaagagcacagcggagaagcccaaggtcaaggagattattgatgag
cgcacaagagagcggctggtgtacgaggtgcggcagaagtgccggaacattgaggacatc
tgcatctcctgtgggagcctcaatgttaccctggaacaccccctcttcgttggaggaatg
tgccaaaactgcaagaactgctttctggagtgtgcgtaccagtacgacgacgacggctac
cagtcctactgcaccatctgctgtgggggccgtgaggtgctcatgtgcggaaacaacaac
tgctgcaggtgcttttgcgtggagtgtgtggacctcttggtggggccgggggctgcccag
gcagccattaaggaagacccctggaactgctacatgtgcgggcacaagggtacctacggg
ctgctgcggcggcgagaggactggccctcccggctccagatgttcttcgctaataaccac
gaccaggaatttgaccctccaaaggtttacccacctgtcccagctgagaagaggaagccc
atccgggtgctgtctctctttgatggaatcgctacagggctcctggtgctgaaggacttg
ggcattcaggtggaccgctacattgcctcggaggtgtgtgaggactccatcacggtgggc
atggtgcggcaccaggggaagatcatgtacgtcggggacgtccgcagcgtcacacagaag
catatccaggagtggggcccattcgatctggtgattgggggcagtccctgcaatgacctc
tccatcgtcaaccctgctcgcaagggcctctacggtagacagccccagctgatggctttc
tcttccgacctctcagagggcactggccggctcttctttgagttctaccgcctcctgcat
gatgcgcggcccaaggagggagatgatcgccccttcttctggctctttgagaatgtggtg
gccatgggcgttagtgacaagagggacatctcgcgatttctcgagtccaaccctgtgatg
attgatgccaaagaagtgtcagctgcacacagggcccgctacttctggggtaaccttccc
ggtatgaacaggccgttggcatccactgtgaatgataagctggagctgcaggagtgtctg
gagcatggcaggatagccaagttcagcaaagtgaggaccattactacgaggtcaaactcc
ataaagcagggcaaagaccagcattttcctgtcttcatgaatgagaaagaggacatctta
tggtgcactgaaatggaaagggtatttggtttcccagtccactatactgacgtctccaac
atgagccgcttggcgaggcagagactgctgggccggtcatggagcgtgccagtcatccgc
cacctcttcgctccgctgaaggagtattttgcgtgtgtgccccagagacttcttgctatt
gaacatcctattggaaagcaaactttccaagagagcacccgggacctgttagcttttgaa
acaggcctgggtgtgattgactggtag