Result of FASTA (omim) for pF1KB8237
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8237, 259 aa
  1>>>pF1KB8237 259 - 259 aa - 259 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.6484+/-0.000422; mu= 3.4282+/- 0.026
 mean_var=199.8787+/-41.857, 0's: 0 Z-trim(118.3): 539  B-trim: 86 in 1/51
 Lambda= 0.090717
 statistics sampled from 30286 (31031) to 30286 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.364), width:  16
 Scan time:  7.740

The best scores are:                                      opt bits E(85289)
XP_005260193 (OMIM: 209920,603200) PREDICTED: DNA- ( 259) 1703 235.2   9e-62
XP_005260194 (OMIM: 209920,603200) PREDICTED: DNA- ( 259) 1703 235.2   9e-62
XP_006722993 (OMIM: 209920,603200) PREDICTED: DNA- ( 259) 1703 235.2   9e-62
XP_005260191 (OMIM: 209920,603200) PREDICTED: DNA- ( 260) 1691 233.6 2.7e-61
XP_005260192 (OMIM: 209920,603200) PREDICTED: DNA- ( 260) 1691 233.6 2.7e-61
NP_003712 (OMIM: 209920,603200) DNA-binding protei ( 260) 1691 233.6 2.7e-61
XP_016882904 (OMIM: 209920,603200) PREDICTED: DNA- ( 260) 1691 233.6 2.7e-61
NP_604389 (OMIM: 209920,603200) DNA-binding protei ( 237)  971 139.4 5.9e-33
NP_001265657 (OMIM: 209920,603200) DNA-binding pro ( 237)  971 139.4 5.9e-33
XP_016882905 (OMIM: 209920,603200) PREDICTED: DNA- ( 238)  971 139.4 5.9e-33
NP_001265656 (OMIM: 209920,603200) DNA-binding pro ( 238)  971 139.4 5.9e-33
XP_005248617 (OMIM: 605787) PREDICTED: ankyrin rep ( 245)  791 115.8 7.4e-26
NP_075526 (OMIM: 605787) ankyrin repeat family A p ( 313)  791 115.9 8.8e-26
XP_016865167 (OMIM: 605787) PREDICTED: ankyrin rep ( 152)  633 94.9 8.9e-20
XP_011517333 (OMIM: 607001,610253) PREDICTED: hist ( 488)  270 47.9   4e-05
XP_011517332 (OMIM: 607001,610253) PREDICTED: hist ( 559)  270 48.0 4.4e-05
XP_011517331 (OMIM: 607001,610253) PREDICTED: hist ( 775)  270 48.1 5.5e-05
XP_011517335 (OMIM: 607001,610253) PREDICTED: hist (1246)  270 48.3 7.7e-05
XP_011517328 (OMIM: 607001,610253) PREDICTED: hist (1253)  270 48.3 7.7e-05
XP_016870626 (OMIM: 607001,610253) PREDICTED: hist (1260)  270 48.3 7.8e-05
XP_016870627 (OMIM: 607001,610253) PREDICTED: hist (1260)  270 48.3 7.8e-05
XP_016870625 (OMIM: 607001,610253) PREDICTED: hist (1265)  270 48.4 7.8e-05
XP_011517327 (OMIM: 607001,610253) PREDICTED: hist (1267)  270 48.4 7.8e-05
XP_005266167 (OMIM: 607001,610253) PREDICTED: hist (1267)  270 48.4 7.8e-05
XP_011517326 (OMIM: 607001,610253) PREDICTED: hist (1275)  270 48.4 7.8e-05
XP_016870624 (OMIM: 607001,610253) PREDICTED: hist (1291)  270 48.4 7.9e-05
XP_006717351 (OMIM: 607001,610253) PREDICTED: hist (1292)  270 48.4 7.9e-05
XP_016870623 (OMIM: 607001,610253) PREDICTED: hist (1293)  270 48.4 7.9e-05
XP_011517325 (OMIM: 607001,610253) PREDICTED: hist (1294)  270 48.4 7.9e-05
XP_005266162 (OMIM: 607001,610253) PREDICTED: hist (1295)  270 48.4 7.9e-05
NP_079033 (OMIM: 607001,610253) histone-lysine N-m (1298)  270 48.4 7.9e-05
XP_011517324 (OMIM: 607001,610253) PREDICTED: hist (1300)  270 48.4 7.9e-05
XP_011517323 (OMIM: 607001,610253) PREDICTED: hist (1301)  270 48.4 7.9e-05
NP_079532 (OMIM: 604599) histone-lysine N-methyltr (1176)  258 46.7 0.00022
NP_006700 (OMIM: 604599) histone-lysine N-methyltr (1210)  258 46.8 0.00022
NP_001276342 (OMIM: 604599) histone-lysine N-methy (1233)  258 46.8 0.00023
XP_005248881 (OMIM: 604599) PREDICTED: histone-lys (1267)  258 46.8 0.00023
XP_016863601 (OMIM: 106410,600919) PREDICTED: anky (1689)  259 47.0 0.00026
XP_016863600 (OMIM: 106410,600919) PREDICTED: anky (1755)  259 47.1 0.00026
XP_016863598 (OMIM: 106410,600919) PREDICTED: anky (1770)  259 47.1 0.00027
XP_016863594 (OMIM: 106410,600919) PREDICTED: anky (1810)  259 47.1 0.00027
XP_016863591 (OMIM: 106410,600919) PREDICTED: anky (1838)  259 47.1 0.00027
XP_016863584 (OMIM: 106410,600919) PREDICTED: anky (1871)  259 47.1 0.00028
XP_016863569 (OMIM: 106410,600919) PREDICTED: anky (1970)  259 47.1 0.00029
XP_016863568 (OMIM: 106410,600919) PREDICTED: anky (2006)  258 47.0 0.00032
XP_016863566 (OMIM: 106410,600919) PREDICTED: anky (4074)  259 47.4 0.00048
XP_016863561 (OMIM: 106410,600919) PREDICTED: anky (4137)  259 47.4 0.00048
XP_016863558 (OMIM: 106410,600919) PREDICTED: anky (4175)  258 47.3 0.00053
NP_065210 (OMIM: 182900,612641) ankyrin-1 isoform  (1719)  250 45.9 0.00059
XP_011542807 (OMIM: 182900,612641) PREDICTED: anky (1751)  250 45.9  0.0006


>>XP_005260193 (OMIM: 209920,603200) PREDICTED: DNA-bind  (259 aa)
 initn: 1703 init1: 1703 opt: 1703  Z-score: 1230.0  bits: 235.2 E(85289): 9e-62
Smith-Waterman score: 1703; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
              190       200       210       220       230       240

              250         
pF1KB8 IENHILKLFQSNLVPADPE
       :::::::::::::::::::
XP_005 IENHILKLFQSNLVPADPE
              250         

>>XP_005260194 (OMIM: 209920,603200) PREDICTED: DNA-bind  (259 aa)
 initn: 1703 init1: 1703 opt: 1703  Z-score: 1230.0  bits: 235.2 E(85289): 9e-62
Smith-Waterman score: 1703; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
              190       200       210       220       230       240

              250         
pF1KB8 IENHILKLFQSNLVPADPE
       :::::::::::::::::::
XP_005 IENHILKLFQSNLVPADPE
              250         

>>XP_006722993 (OMIM: 209920,603200) PREDICTED: DNA-bind  (259 aa)
 initn: 1703 init1: 1703 opt: 1703  Z-score: 1230.0  bits: 235.2 E(85289): 9e-62
Smith-Waterman score: 1703; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
              190       200       210       220       230       240

              250         
pF1KB8 IENHILKLFQSNLVPADPE
       :::::::::::::::::::
XP_006 IENHILKLFQSNLVPADPE
              250         

>>XP_005260191 (OMIM: 209920,603200) PREDICTED: DNA-bind  (260 aa)
 initn: 1285 init1: 1285 opt: 1691  Z-score: 1221.5  bits: 233.6 E(85289): 2.7e-61
Smith-Waterman score: 1691; 99.6% identity (99.6% similar) in 260 aa overlap (1-259:1-260)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 PQ-GSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
       :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
              190       200       210       220       230       240

     240       250         
pF1KB8 VIENHILKLFQSNLVPADPE
       ::::::::::::::::::::
XP_005 VIENHILKLFQSNLVPADPE
              250       260

>>XP_005260192 (OMIM: 209920,603200) PREDICTED: DNA-bind  (260 aa)
 initn: 1285 init1: 1285 opt: 1691  Z-score: 1221.5  bits: 233.6 E(85289): 2.7e-61
Smith-Waterman score: 1691; 99.6% identity (99.6% similar) in 260 aa overlap (1-259:1-260)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 PQ-GSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
       :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
              190       200       210       220       230       240

     240       250         
pF1KB8 VIENHILKLFQSNLVPADPE
       ::::::::::::::::::::
XP_005 VIENHILKLFQSNLVPADPE
              250       260

>>NP_003712 (OMIM: 209920,603200) DNA-binding protein RF  (260 aa)
 initn: 1285 init1: 1285 opt: 1691  Z-score: 1221.5  bits: 233.6 E(85289): 2.7e-61
Smith-Waterman score: 1691; 99.6% identity (99.6% similar) in 260 aa overlap (1-259:1-260)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 PQ-GSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
       :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
              190       200       210       220       230       240

     240       250         
pF1KB8 VIENHILKLFQSNLVPADPE
       ::::::::::::::::::::
NP_003 VIENHILKLFQSNLVPADPE
              250       260

>>XP_016882904 (OMIM: 209920,603200) PREDICTED: DNA-bind  (260 aa)
 initn: 1285 init1: 1285 opt: 1691  Z-score: 1221.5  bits: 233.6 E(85289): 2.7e-61
Smith-Waterman score: 1691; 99.6% identity (99.6% similar) in 260 aa overlap (1-259:1-260)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 PQ-GSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
       :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
              190       200       210       220       230       240

     240       250         
pF1KB8 VIENHILKLFQSNLVPADPE
       ::::::::::::::::::::
XP_016 VIENHILKLFQSNLVPADPE
              250       260

>>NP_604389 (OMIM: 209920,603200) DNA-binding protein RF  (237 aa)
 initn: 1543 init1: 971 opt: 971  Z-score: 712.7  bits: 139.4 E(85289): 5.9e-33
Smith-Waterman score: 1502; 91.1% identity (91.1% similar) in 259 aa overlap (1-259:1-237)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_604 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
       :::::::::::::::::::::::::::::                       ::::::::
NP_604 PQGSSLKHSTTLTNRQRGNEVSALPATLDC----------------------DNLVNKPD
               70        80        90                              

              130       140       150       160       170       180
pF1KB8 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_604 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
      100       110       120       130       140       150        

              190       200       210       220       230       240
pF1KB8 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_604 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
      160       170       180       190       200       210        

              250         
pF1KB8 IENHILKLFQSNLVPADPE
       :::::::::::::::::::
NP_604 IENHILKLFQSNLVPADPE
      220       230       

>>NP_001265657 (OMIM: 209920,603200) DNA-binding protein  (237 aa)
 initn: 1543 init1: 971 opt: 971  Z-score: 712.7  bits: 139.4 E(85289): 5.9e-33
Smith-Waterman score: 1502; 91.1% identity (91.1% similar) in 259 aa overlap (1-259:1-237)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PQGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD
       :::::::::::::::::::::::::::::                       ::::::::
NP_001 PQGSSLKHSTTLTNRQRGNEVSALPATLDC----------------------DNLVNKPD
               70        80        90                              

              130       140       150       160       170       180
pF1KB8 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV
      100       110       120       130       140       150        

              190       200       210       220       230       240
pF1KB8 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV
      160       170       180       190       200       210        

              250         
pF1KB8 IENHILKLFQSNLVPADPE
       :::::::::::::::::::
NP_001 IENHILKLFQSNLVPADPE
      220       230       

>>XP_016882905 (OMIM: 209920,603200) PREDICTED: DNA-bind  (238 aa)
 initn: 1403 init1: 971 opt: 971  Z-score: 712.7  bits: 139.4 E(85289): 5.9e-33
Smith-Waterman score: 1490; 90.8% identity (90.8% similar) in 260 aa overlap (1-259:1-238)

               10        20        30        40        50        60
pF1KB8 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MELTQPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLSLFPCTPEPVNPEPDASVSS
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB8 PQ-GSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDNLVNKP
       :: :::::::::::::::::::::::::::                       :::::::
XP_016 PQAGSSLKHSTTLTNRQRGNEVSALPATLDC----------------------DNLVNKP
               70        80        90                              

     120       130       140       150       160       170         
pF1KB8 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD
      100       110       120       130       140       150        

     180       190       200       210       220       230         
pF1KB8 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ
      160       170       180       190       200       210        

     240       250         
pF1KB8 VIENHILKLFQSNLVPADPE
       ::::::::::::::::::::
XP_016 VIENHILKLFQSNLVPADPE
      220       230        




259 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:02:20 2016 done: Fri Nov  4 22:02:21 2016
 Total Scan time:  7.740 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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