GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:57:56

Sequence gi568815591r:74132109_74354383 : 222275 bp : 50.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  33299  33338   40                              -0.36
 1.01 Init +  42276  42334   59  2  2   56   72   209 0.663  16.88
 1.02 Intr +  55503  55690  188  0  2  116  113   117 0.994  16.33
 1.03 Intr +  56211  56297   87  1  0   55   75   100 0.906   5.34
 1.04 Intr +  62633  62770  138  0  0   96  102    59 0.981   8.54
 1.05 Term +  63061  63200  140  2  2  115   52    74 0.987   4.63
 1.06 PlyA +  64965  64970    6                               1.05

 2.03 PlyA -  65007  65002    6                               1.05
 2.02 Term -  71370  71276   95  1  2   62   54   106 0.643   2.59
 2.01 Init -  74466  74418   49  0  1   66  111    -5 0.249   0.79
 2.00 Prom -  80486  80447   40                              -1.56

 3.00 Prom +  82618  82657   40                              -7.76
 3.01 Init +  83868  83961   94  2  1  104  115   110 0.960  13.84
 3.02 Intr +  84717  84756   40  1  1  114   65    26 0.697   0.18
 3.03 Intr +  88109  88146   38  2  2  151   96    14 0.746   6.41
 3.04 Intr +  88596  88626   31  1  1  114   84     0 0.654  -0.61
 3.05 Intr +  89529  89584   56  0  2   70  100    66 0.662   4.62
 3.06 Intr +  91616  91675   60  0  0  127   94   104 0.999  13.61
 3.07 Intr +  91910  92089  180  0  0  111   69    36 0.931   3.84
 3.08 Term +  92531  92634  104  0  2  116   49    84 0.940   5.74
 3.09 PlyA +  93282  93287    6                               1.05

 4.12 PlyA -  95112  95107    6                               1.05
 4.11 Term - 100108  99981  128  2  2   88   42    52 0.731  -0.96
 4.10 Intr - 103537 103420  118  1  1   77   89   126 0.948  11.64
 4.09 Intr - 105334 105254   81  1  0  112   58   120 0.996  11.23
 4.08 Intr - 106880 106815   66  2  0   77   82   100 0.936   7.40
 4.07 Intr - 107987 107830  158  0  2   84   91   251 0.947  24.73
 4.06 Intr - 111138 111038  101  2  2   89  109   109 0.931  12.85
 4.05 Intr - 114655 114554  102  0  0   58   80    88 0.941   4.29
 4.04 Intr - 117010 116904  107  1  2   32   96    92 0.992   3.41
 4.03 Intr - 117672 117631   42  0  0   79  101    44 0.901   3.24
 4.02 Intr - 120390 120321   70  2  1   78  105    48 0.969   4.68
 4.01 Init - 122275 122163  113  1  2   84   65   146 0.923  11.61
 4.00 Prom - 126087 126048   40                              -1.96

 5.06 PlyA - 126785 126780    6                               1.05
 5.05 Term - 147733 147537  197  2  2   61   43    91 0.086  -0.53
 5.04 Intr - 154874 154826   49  2  1   41  105    61 0.127   1.35
 5.03 Intr - 157113 156954  160  2  1  132  100    66 0.549  12.19
 5.02 Intr - 165059 164888  172  0  1   46   32   143 0.060   3.50
 5.01 Init - 168986 168938   49  2  1   55   91    53 0.861   3.41
 5.00 Prom - 169103 169064   40                              -6.06

 6.00 Prom + 177788 177827   40                              -3.26
 6.01 Init + 185439 185559  121  2  1   98  102   135 0.230  16.25
 6.02 Intr + 206340 206896  557  1  2  141  105   867 0.985  86.26
 6.03 Intr + 221772 221896  125  2  2   86   80   166 0.060  14.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  57565  57629   65  2  2   85   92    92 0.972   7.74
S.002 Intr +  57714  57810   97  2  1   54   45   122 0.920   4.08
S.003 Term - 202272 202081  192  0  0  128   54    68 0.994   4.82
S.004 Init - 202378 202304   75  1  0   97   89    63 0.996   8.41
S.005 Init + 221433 221484   52  2  1  114   50    53 0.878   5.42


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:74132109_74354383|GENSCAN_predicted_peptide_1|203_aa
MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDA
IFKDLSIRSVRLVRDKDTDKFKGCGSKEQEEEGIRAAFSCLQGFLKEVCLLCFRDDFLGG
RGGSRPGDRRTGPPMGSRFRDGPPLRGSNMDFREPTEEERAQRPRLQLKPRTVATPLNQV
ANPNSAIFGGARPREEVVQKEQE

>gi568815591r:74132109_74354383|GENSCAN_predicted_CDS_1|612_bp
atggcggacttcgacacctacgacgatcgggcctacagcagcttcggcggcggcagaggg
tcccgcggcagtgctggtggccatggttcccgtagccagaaggagttgcccacagagccc
ccctacacagcatacgtaggaaatctacctttcaatacggttcagggcgacatagatgct
atctttaaggatctcagcataaggagtgtacggctagtcagagacaaagacacagataaa
tttaaagggtgcgggagcaaagagcaggaagaagaagggatccgagcagcattctcctgc
ctgcagggcttcctgaaggaagtgtgcctgctgtgcttcagggatgacttcttagggggc
aggggaggtagtcgcccaggcgaccggcgaacaggcccccccatgggcagccgcttcaga
gatggccctcccctccgtggatccaacatggatttcagagaacccacagaagaggaaaga
gcacagagaccacgactccagcttaaacctcgaacagtcgcgacgcccctcaatcaagta
gccaatcccaactctgctatcttcgggggtgccaggcctagagaggaagtcgttcaaaag
gagcaagaatga

>gi568815591r:74132109_74354383|GENSCAN_predicted_peptide_2|47_aa
MPSALDSGPRFLPTVTEQNCSCHRKQKPNACGHQQNYRREEKLFNSC

>gi568815591r:74132109_74354383|GENSCAN_predicted_CDS_2|144_bp
atgccaagtgcactggattcaggaccacgtttccttcccacggtaaccgagcagaactgc
tcctgccacagaaaacagaagcccaatgcttgcggccatcagcagaattatcggagagag
gaaaaacttttcaacagctgctga

>gi568815591r:74132109_74354383|GENSCAN_predicted_peptide_3|200_aa
MSSGTELLWPGAALLVLLGVAASLCVRCSRPGAKRSEKIYQQRSLKDKLLQFYPSLEGSR
HGSEEAYIDPIAMEYYNWGRFSKPPEDDDANSYENVLICKQKTTETGAQQEGIGGLCRGD
LSLSLALKTGPTSGLCPSASPEEDEESEDYQNSASIHQWRESRKVMGQLQREASPGPVGS
PDEEDGEPDYVNGEVAATEA

>gi568815591r:74132109_74354383|GENSCAN_predicted_CDS_3|603_bp
atgagctcggggactgaactgctgtggcccggagcagcgctgctggtgctgttgggggtg
gcagccagtctgtgtgtgcgctgctcacgcccaggtgcaaagaggtcagagaaaatctac
cagcagagaagtctgaaggacaagctgttgcaattctaccccagcctggagggaagcaga
cacgggtcggaggaagcctacatagaccccattgccatggagtattacaactgggggcgg
ttctcgaagcccccagaagatgatgatgccaattcctacgagaatgtgctcatttgcaag
cagaaaaccacagagacaggtgcccagcaggagggcataggtggcctctgcagaggggac
ctcagcctgtcactggccctgaagactggccccacttctggtctctgtccctctgcctcc
ccggaagaagatgaggaatctgaggattatcagaactcagcatccatccatcagtggcgc
gagtccaggaaggtcatggggcaactccagagagaagcatcccctggcccggtgggaagc
ccagacgaggaggacggggaaccggattacgtgaatggggaggtggcagccacagaagcc
tag

>gi568815591r:74132109_74354383|GENSCAN_predicted_peptide_4|361_aa
MEVEAVCGGAGEVEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRL
EVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKI
KMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEP
IQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTF
SGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIF
RVCKTFQMAEYLKLEFIKVGNWIHSHENSGRSELSFADGRPPGKAVSEDNGPGGQLEQRL
H

>gi568815591r:74132109_74354383|GENSCAN_predicted_CDS_4|1086_bp
atggaggtggaggccgtctgtggtggcgcgggcgaggtggaggcccaggactctgaccct
gcccctgccttcagcaaggcccccggcagcgccggccactacgaactgccgtgggttgaa
aaatataggccagtaaagctgaatgaaattgtcgggaatgaagacaccgtgagcaggcta
gaggtctttgcaagggaaggaaatgtgcccaacatcatcattgcgggccctccaggaacc
ggcaagaccacaagcattctgtgcttggcccgggccctgctgggcccagcactcaaagat
gccatgttggaactcaatgcttcaaatgacaggggcattgacgttgtgaggaataaaatt
aaaatgtttgctcaacaaaaagtcactcttcccaaaggccgacataagatcatcattctg
gatgaagcagacagcatgaccgacggagcccagcaagccttgaggagaaccatggaaatc
tactctaaaaccactcgcttcgcccttgcttgtaatgcttcggataagatcatcgagccc
attcagtcccgctgtgcagtcctccggtacacaaagctgaccgacgcccagatcctcacc
aggctgatgaatgttatcgagaaggagagggtaccctacactgatgacggcctagaagcc
atcatcttcacggcccagggagacatgaggcaggcgctgaacaacctgcagtccaccttc
tcaggatttggcttcattaacagtgagaacgtgttcaaggtctgtgacgagccccaccca
ctgctggtaaaggagatgatccagcactgtgtgaatgccaacattgacgaagcctacaag
attcttgctcacttgtggcatctgggctactcaccagaagatatcattggcaacatcttt
cgagtgtgtaaaactttccaaatggcagaatacctgaaactggagtttatcaaggtcgga
aattggatacactcacatgaaaatagcggaaggagtgaactctcttttgcagatggcagg
cctcctggcaaggctgtgtcagaagacaatggccccggtggccagttagagcagagactt
cactga

>gi568815591r:74132109_74354383|GENSCAN_predicted_peptide_5|208_aa
MHVGEDVEERERVYTVAALRGSLELTPGFRSCTDASLPLHPRPKLTEDTDSKEKAASQEP
RYLCQKGDPLLISKPQLSFVGRPGFAHIHLRAGHLVVLTSRLVKRILQPCYACKDVSGHW
EGRQLGKYYSEQQPAVNRPYLAAAQADSCTRNFHGTVSHLQTSSVTIRVGGQQIWGLGSA
AFPNAASCDSILPLWQSNESVEDLQTRS

>gi568815591r:74132109_74354383|GENSCAN_predicted_CDS_5|627_bp
atgcatgttggagaggatgtggaggaaagggaacgcgtatacactgttgctgcccttaga
ggctctcttgagcttacaccaggattccgcagctgtacagatgcatctcttcccctgcac
cccaggcccaagctgactgaggacacagactccaaggagaaagcagcaagccaggagccc
agatacctgtgtcagaaaggcgacccactgctgatcagcaagccgcagctgtcctttgtg
gggcgtccagggttcgcccacatccacctccgcgctgggcacctggtggtgcttacatcg
cgtttggtgaaacgcatcctccagccatgctatgcttgcaaagatgtctctggtcattgg
gaaggacggcagcttgggaagtattattcagagcaacagcctgcggtcaacagaccttac
ctggccgctgctcaagctgactcatgcaccaggaatttccacgggactgtgtcacacttg
caaacgtcatctgtgactatccgggtgggaggacagcagatctggggactgggctctgca
gccttcccaaatgcagcttcctgtgattccattcttccactttggcagtcgaatgagtca
gtggaagatttgcaaacacggagctaa

>gi568815591r:74132109_74354383|GENSCAN_predicted_peptide_6|268_aa
MQKPSGLKPPGRGGKHSSPMGRTSTGSASSSAAVAASSKEGSPLHKQSSGPSSSPAAAAA
PEKPGPKAAEVGDDFLGDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKN
DGAVGGVRYFECPALQGIFTRPSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPL
TSRVIPLRESVLNSSVKTGNESGSNLSDSGSVKRGEKDLRLGDRVLVGGTKTGVVRYVGE
TDFAKGEWCGVELDEPLGKNDGAVAGTS

>gi568815591r:74132109_74354383|GENSCAN_predicted_CDS_6|804_bp
atgcagaagcccagcggcctgaagccccccggccgtggggggaagcactccagccccatg
ggccggacatctactgggtcagcttcatcctcggcggcggtggccgctagctccaaggaa
ggctccccactgcacaaacagtcatctggaccctcctcctccccggccgcagctgctgcc
cccgagaagccgggccccaaggcggcggaagtgggggatgacttcctgggggactttgtg
gtgggcgagcgggtgtgggtgaacggcgtgaagccaggcgtggtgcagtatctgggagag
acgcagttcgcaccgggccagtgggctggcgtggtgctggacgacccggtgggcaagaat
gatggcgcggtgggcggcgtgcgctacttcgagtgcccggccctccagggtatcttcacg
cggccctccaagctgacccggcagcccacggccgagggctcggggagtgatgcccactcc
gtggagtcgctgactgcccagaacctgtcattgcattcgggcacggccacgcccccgctg
accagccgcgtcatccccctgcgggagagcgtcctcaacagctccgtgaagactggcaac
gagtcgggatccaacctctcagacagcggctctgtgaagcggggcgaaaaggacctgcgc
ctgggggaccgcgtgctggttggcgggacgaagactggcgtggtgcggtacgtgggggag
acagactttgccaagggcgagtggtgtggcgtggagctggacgagccccttgggaagaat
gatggggcggtggcgggcaccagn