Result of FASTA (omim) for pF1KB5186
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5186, 281 aa
  1>>>pF1KB5186 281 - 281 aa - 281 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0193+/-0.000383; mu= 18.4376+/- 0.024
 mean_var=92.7622+/-19.259, 0's: 0 Z-trim(116.3): 310  B-trim: 1607 in 2/50
 Lambda= 0.133165
 statistics sampled from 26940 (27335) to 26940 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.32), width:  16
 Scan time:  6.100

The best scores are:                                      opt bits E(85289)
NP_057168 (OMIM: 605550) dexamethasone-induced Ras ( 281) 1867 368.4 8.2e-102
XP_016884190 (OMIM: 612842) PREDICTED: GTP-binding ( 278) 1020 205.7 7.9e-53
XP_016884191 (OMIM: 612842) PREDICTED: GTP-binding ( 266) 1015 204.7 1.5e-52
XP_005261499 (OMIM: 612842) PREDICTED: GTP-binding ( 266) 1015 204.7 1.5e-52
NP_055125 (OMIM: 612842) GTP-binding protein Rhes  ( 266) 1015 204.7 1.5e-52
XP_011528342 (OMIM: 612842) PREDICTED: GTP-binding ( 266) 1015 204.7 1.5e-52
NP_001186918 (OMIM: 605550) dexamethasone-induced  ( 122)  624 129.2 3.6e-30
NP_660156 (OMIM: 607862) GTP-binding protein Di-Ra ( 198)  366 79.9 4.2e-15
XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding ( 232)  366 80.0 4.6e-15
NP_060064 (OMIM: 607863) GTP-binding protein Di-Ra ( 199)  358 78.4 1.2e-14
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204)  341 75.1 1.2e-13
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183)  334 73.7 2.8e-13
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183)  332 73.3 3.7e-13
NP_001010942 (OMIM: 179530) ras-related protein Ra ( 184)  318 70.7 2.4e-12
NP_056461 (OMIM: 179530) ras-related protein Rap-1 ( 184)  318 70.7 2.4e-12
NP_789765 (OMIM: 109800,137550,162900,163200,18847 ( 170)  317 70.4 2.6e-12
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218)  318 70.7 2.7e-12
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188)  317 70.5 2.8e-12
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188)  317 70.5 2.8e-12
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189)  317 70.5 2.8e-12
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189)  317 70.5 2.8e-12
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189)  317 70.5 2.8e-12
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189)  317 70.5 2.8e-12
XP_016857453 (OMIM: 179520) PREDICTED: ras-related ( 184)  316 70.3 3.1e-12
NP_001010935 (OMIM: 179520) ras-related protein Ra ( 184)  316 70.3 3.1e-12
NP_001278825 (OMIM: 179520) ras-related protein Ra ( 184)  316 70.3 3.1e-12
NP_002875 (OMIM: 179520) ras-related protein Rap-1 ( 184)  316 70.3 3.1e-12
XP_016857451 (OMIM: 179520) PREDICTED: ras-related ( 184)  316 70.3 3.1e-12
XP_016857452 (OMIM: 179520) PREDICTED: ras-related ( 184)  316 70.3 3.1e-12
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227)  317 70.6 3.1e-12
XP_016857449 (OMIM: 179520) PREDICTED: ras-related ( 195)  316 70.3 3.2e-12
XP_016857450 (OMIM: 179520) PREDICTED: ras-related ( 195)  316 70.3 3.2e-12
NP_002515 (OMIM: 114500,137550,162900,163200,16479 ( 189)  305 68.2 1.4e-11
NP_002921 (OMIM: 609592) GTP-binding protein Rit2  ( 217)  301 67.5 2.5e-11
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219)  300 67.3 2.9e-11
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236)  300 67.3 3.1e-11
NP_001259006 (OMIM: 609592) GTP-binding protein Ri ( 153)  288 64.8 1.1e-10
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206)  284 64.2 2.4e-10
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206)  284 64.2 2.4e-10
XP_005263785 (OMIM: 179551) PREDICTED: ras-related ( 206)  284 64.2 2.4e-10
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206)  284 64.2 2.4e-10
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206)  284 64.2 2.4e-10
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228)  284 64.2 2.5e-10
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228)  284 64.2 2.5e-10
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229)  284 64.2 2.5e-10
XP_005247286 (OMIM: 608435) PREDICTED: ras-related ( 170)  282 63.7 2.7e-10
NP_001239019 (OMIM: 608435) ras-related protein M- ( 208)  282 63.8 3.1e-10
NP_001078518 (OMIM: 608435) ras-related protein M- ( 208)  282 63.8 3.1e-10
XP_016861376 (OMIM: 608435) PREDICTED: ras-related ( 208)  282 63.8 3.1e-10
NP_036351 (OMIM: 608435) ras-related protein M-Ras ( 208)  282 63.8 3.1e-10


>>NP_057168 (OMIM: 605550) dexamethasone-induced Ras-rel  (281 aa)
 initn: 1867 init1: 1867 opt: 1867  Z-score: 1948.8  bits: 368.4 E(85289): 8.2e-102
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)

               10        20        30        40        50        60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 ILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 NSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDPG
              190       200       210       220       230       240

              250       260       270       280 
pF1KB5 DAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
       :::::::::::::::::::::::::::::::::::::::::
NP_057 DAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
              250       260       270       280 

>>XP_016884190 (OMIM: 612842) PREDICTED: GTP-binding pro  (278 aa)
 initn: 1134 init1: 985 opt: 1020  Z-score: 1069.4  bits: 205.7 E(85289): 7.9e-53
Smith-Waterman score: 1148; 62.1% identity (84.1% similar) in 277 aa overlap (5-280:12-277)

                      10        20        30        40        50   
pF1KB5        MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAY
                  ::.: .  ..  ::.:::: ::::.::.:.:::..::::::.::::: :
XP_016 MPASLALLQPRAMMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQY
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB5 TPTIEDFHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEE
       :::::::::: :.:::..:::::::::::::::::::::::::::::::::::::.::.:
XP_016 TPTIEDFHRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDE
               70        80        90       100       110       120

           120       130       140        150       160       170  
pF1KB5 VQRLRQQILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCA
       :.::..:::..:::::::::: ...:.::::::.:. .. :.:   : : ::. : . ::
XP_016 VKRLQKQILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCA
              130       140       150       160       170          

            180       190       200       210       220       230  
pF1KB5 YFEISAKKNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGS
       :::.:::::...:.:: .::.::::: :::: ::::.:::: :..: . .  ... .   
XP_016 YFEVSAKKNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM--
     180       190       200       210       220       230         

            240       250       260       270       280 
pF1KB5 GGGGGDPGDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
               ::.:.:.::::::::.::: ::. :.   .::.....:.: 
XP_016 --------DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
               240       250       260       270        

>>XP_016884191 (OMIM: 612842) PREDICTED: GTP-binding pro  (266 aa)
 initn: 1129 init1: 980 opt: 1015  Z-score: 1064.5  bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)

               10        20        30        40        50        60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
            :.: .  ..  ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
XP_016      MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
       ::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
XP_016 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
          60        70        80        90       100       110     

              130       140        150       160       170         
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
       ::..:::::::::: ...:.::::::.:. .. :.:   : : ::. : . :::::.:::
XP_016 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
         120       130       140       150       160        170    

     180       190       200       210       220       230         
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
       ::...:.:: .::.::::: :::: ::::.:::: :..: . .  ... .          
XP_016 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
          180       190       200       210       220              

     240       250       260       270       280 
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
        ::.:.:.::::::::.::: ::. :.   .::.....:.: 
XP_016 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
          230       240       250       260      

>>XP_005261499 (OMIM: 612842) PREDICTED: GTP-binding pro  (266 aa)
 initn: 1129 init1: 980 opt: 1015  Z-score: 1064.5  bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)

               10        20        30        40        50        60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
            :.: .  ..  ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
XP_005      MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
       ::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
XP_005 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
          60        70        80        90       100       110     

              130       140        150       160       170         
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
       ::..:::::::::: ...:.::::::.:. .. :.:   : : ::. : . :::::.:::
XP_005 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
         120       130       140       150       160        170    

     180       190       200       210       220       230         
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
       ::...:.:: .::.::::: :::: ::::.:::: :..: . .  ... .          
XP_005 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
          180       190       200       210       220              

     240       250       260       270       280 
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
        ::.:.:.::::::::.::: ::. :.   .::.....:.: 
XP_005 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
          230       240       250       260      

>>NP_055125 (OMIM: 612842) GTP-binding protein Rhes [Hom  (266 aa)
 initn: 1129 init1: 980 opt: 1015  Z-score: 1064.5  bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)

               10        20        30        40        50        60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
            :.: .  ..  ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
NP_055      MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
       ::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
NP_055 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
          60        70        80        90       100       110     

              130       140        150       160       170         
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
       ::..:::::::::: ...:.::::::.:. .. :.:   : : ::. : . :::::.:::
NP_055 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
         120       130       140       150       160        170    

     180       190       200       210       220       230         
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
       ::...:.:: .::.::::: :::: ::::.:::: :..: . .  ... .          
NP_055 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
          180       190       200       210       220              

     240       250       260       270       280 
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
        ::.:.:.::::::::.::: ::. :.   .::.....:.: 
NP_055 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
          230       240       250       260      

>>XP_011528342 (OMIM: 612842) PREDICTED: GTP-binding pro  (266 aa)
 initn: 1129 init1: 980 opt: 1015  Z-score: 1064.5  bits: 204.7 E(85289): 1.5e-52
Smith-Waterman score: 1143; 62.0% identity (84.1% similar) in 276 aa overlap (6-280:1-265)

               10        20        30        40        50        60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
            :.: .  ..  ::.:::: ::::.::.:.:::..::::::.::::: ::::::::
XP_011      MMKTLSSGNCTLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDF
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
       ::: :.:::..:::::::::::::::::::::::::::::::::::::.::.::.::..:
XP_011 HRKVYNIRGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQ
          60        70        80        90       100       110     

              130       140        150       160       170         
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDR-DFYREVDQREIEQLVGDDPQRCAYFEISAK
       ::..:::::::::: ...:.::::::.:. .. :.:   : : ::. : . :::::.:::
XP_011 ILEVKSCLKNKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-ENCAYFEVSAK
         120       130       140       150       160        170    

     180       190       200       210       220       230         
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
       ::...:.:: .::.::::: :::: ::::.:::: :..: . .  ... .          
XP_011 KNTNVDEMFYVLFSMAKLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEM---------
          180       190       200       210       220              

     240       250       260       270       280 
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
        ::.:.:.::::::::.::: ::. :.   .::.....:.: 
XP_011 -DAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCTIQ
          230       240       250       260      

>>NP_001186918 (OMIM: 605550) dexamethasone-induced Ras-  (122 aa)
 initn: 624 init1: 624 opt: 624  Z-score: 662.6  bits: 129.2 E(85289): 3.6e-30
Smith-Waterman score: 624; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)

               10        20        30        40        50        60
pF1KB5 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQ
       :::::::::::::::::::::::::::::::::::                         
NP_001 HRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTDPRHQVLPQEQNQGERGRAPGHLRQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 ILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKK
                                                                   
NP_001 QG                                                          
                                                                   

>>NP_660156 (OMIM: 607862) GTP-binding protein Di-Ras1 [  (198 aa)
 initn: 381 init1: 301 opt: 366  Z-score: 392.2  bits: 79.9 E(85289): 4.2e-15
Smith-Waterman score: 423; 41.2% identity (70.6% similar) in 177 aa overlap (19-194:1-167)

               10        20         30        40        50         
pF1KB5 MKLAAMIKKMCPSDSELSIPAK-NCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIED
                         .: . : ::.:..:.. :::...: ::. : :.:.: :::::
NP_660                   MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIED
                                 10        20        30        40  

      60        70        80        90       100       110         
pF1KB5 FHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQ
        .:.  :    :  :.: ::.:.: ::::.::::  : .::::::. ...:.::.  . .
NP_660 TYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYK
             50        60        70        80        90       100  

     120       130       140       150       160       170         
pF1KB5 QILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAK
        :.. :. ..       :.:... ::: : .  :::: ::  : :...  .::..: :::
NP_660 LIVQIKGSVE-------DIPVMLVGNKCD-ETQREVDTREA-QAVAQE-WKCAFMETSAK
            110              120        130        140        150  

     180       190       200       210       220       230         
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
        : .. ..:. :...                                             
NP_660 MNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM              
            160       170       180       190                      

>>XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding pro  (232 aa)
 initn: 381 init1: 301 opt: 366  Z-score: 391.4  bits: 80.0 E(85289): 4.6e-15
Smith-Waterman score: 423; 41.2% identity (70.6% similar) in 177 aa overlap (19-194:35-201)

                           10        20         30        40       
pF1KB5             MKLAAMIKKMCPSDSELSIPAK-NCYRMVILGSSKVGKTAIVSRFLTG
                                     .: . : ::.:..:.. :::...: ::. :
XP_011 QGLRARQARSGVLAAGTSPPGPGRPPAAGKMPEQSNDYRVVVFGAGGVGKSSLVLRFVKG
           10        20        30        40        50        60    

        50        60        70        80        90       100       
pF1KB5 RFEDAYTPTIEDFHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDN
        :.:.: ::::: .:.  :    :  :.: ::.:.: ::::.::::  : .::::::. .
XP_011 TFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTS
           70        80        90       100       110       120    

       110       120       130       140       150       160       
pF1KB5 RDSFEEVQRLRQQILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDD
       ..:.::.  . . :.. :. ..       :.:... ::: : .  :::: ::  : :...
XP_011 KQSLEELGPIYKLIVQIKGSVE-------DIPVMLVGNKCD-ETQREVDTREA-QAVAQE
          130       140              150        160        170     

       170       180       190       200       210       220       
pF1KB5 PQRCAYFEISAKKNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKL
         .::..: ::: : .. ..:. :...                                 
XP_011 -WKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM  
          180       190       200       210       220       230    

>>NP_060064 (OMIM: 607863) GTP-binding protein Di-Ras2 [  (199 aa)
 initn: 424 init1: 309 opt: 358  Z-score: 383.8  bits: 78.4 E(85289): 1.2e-14
Smith-Waterman score: 422; 36.2% identity (65.7% similar) in 210 aa overlap (19-227:1-192)

               10        20         30        40        50         
pF1KB5 MKLAAMIKKMCPSDSELSIPAK-NCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIED
                         .: . : ::....:.. :::...: ::. : :...: ::.::
NP_060                   MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVED
                                 10        20        30        40  

      60        70        80        90       100       110         
pF1KB5 FHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQ
        .:.  :    .  :.: ::.:.: ::::.::::  : .::::.:. .:.:.::.. . .
NP_060 TYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYE
             50        60        70        80        90       100  

     120       130       140       150       160       170         
pF1KB5 QILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAK
       :: . :. ...       .:... ::: :..  :::.. : : :.     .::..: :::
NP_060 QICEIKGDVES-------IPIMLVGNKCDESPSREVQSSEAEALA--RTWKCAFMETSAK
            110              120       130       140         150   

     180       190       200       210       220       230         
pF1KB5 KNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDP
        : .. ..:. :. . :         .: ::.:      :.  :..::            
NP_060 LNHNVKELFQELLNLEK---------RRTVSLQIDGKKSKQQKRKEKLKGKCVIM     
           160       170                180       190              

     240       250       260       270       280 
pF1KB5 GDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS




281 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:13:16 2016 done: Fri Nov  4 20:13:17 2016
 Total Scan time:  6.100 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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