Result of FASTA (ccds) for pF1KB8652
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8652, 201 aa
  1>>>pF1KB8652 201 - 201 aa - 201 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4900+/-0.000758; mu= 8.0099+/- 0.046
 mean_var=86.3945+/-16.677, 0's: 0 Z-trim(109.9): 18  B-trim: 0 in 0/51
 Lambda= 0.137985
 statistics sampled from 11203 (11220) to 11203 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.345), width:  16
 Scan time:  1.640

The best scores are:                                      opt bits E(32554)
CCDS13775.1 RANBP1 gene_id:5902|Hs108|chr22        ( 201) 1335 275.0 2.2e-74
CCDS63408.1 RANBP1 gene_id:5902|Hs108|chr22        ( 200) 1318 271.6 2.3e-73
CCDS74823.1 RANBP1 gene_id:5902|Hs108|chr22        ( 278) 1310 270.1 9.2e-73
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2          (3224)  598 128.7 3.8e-29
CCDS46394.1 RGPD8 gene_id:727851|Hs108|chr2        (1765)  478 104.7 3.5e-22
CCDS2082.1 RGPD5 gene_id:84220|Hs108|chr2          (1765)  478 104.7 3.5e-22
CCDS46388.1 RGPD6 gene_id:729540|Hs108|chr2        (1765)  478 104.7 3.5e-22
CCDS46358.2 RGPD1 gene_id:400966|Hs108|chr2        (1748)  476 104.3 4.6e-22
CCDS42710.2 RGPD2 gene_id:729857|Hs108|chr2        (1756)  476 104.3 4.6e-22
CCDS46379.1 RGPD3 gene_id:653489|Hs108|chr2        (1758)  476 104.3 4.6e-22
CCDS46381.1 RGPD4 gene_id:285190|Hs108|chr2        (1758)  466 102.3 1.8e-21


>>CCDS13775.1 RANBP1 gene_id:5902|Hs108|chr22             (201 aa)
 initn: 1335 init1: 1335 opt: 1335  Z-score: 1448.9  bits: 275.0 E(32554): 2.2e-74
Smith-Waterman score: 1335; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201)

               10        20        30        40        50        60
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
              130       140       150       160       170       180

              190       200 
pF1KB8 AEKLEALSVKEETKEDAEEKQ
       :::::::::::::::::::::
CCDS13 AEKLEALSVKEETKEDAEEKQ
              190       200 

>>CCDS63408.1 RANBP1 gene_id:5902|Hs108|chr22             (200 aa)
 initn: 1135 init1: 1135 opt: 1318  Z-score: 1430.7  bits: 271.6 E(32554): 2.3e-73
Smith-Waterman score: 1318; 99.5% identity (99.5% similar) in 201 aa overlap (1-201:1-200)

               10        20        30        40        50        60
pF1KB8 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
       :::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
CCDS63 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK-GSGKNDHAEKV
              130       140       150       160        170         

              190       200 
pF1KB8 AEKLEALSVKEETKEDAEEKQ
       :::::::::::::::::::::
CCDS63 AEKLEALSVKEETKEDAEEKQ
     180       190       200

>>CCDS74823.1 RANBP1 gene_id:5902|Hs108|chr22             (278 aa)
 initn: 1310 init1: 1310 opt: 1310  Z-score: 1419.8  bits: 270.1 E(32554): 9.2e-73
Smith-Waterman score: 1310; 97.5% identity (99.0% similar) in 201 aa overlap (1-201:78-278)

                                             10        20        30
pF1KB8                               MAAAKDTHEDHDTSTENTDESNHDPQFEPI
                                     .  ..:::::::::::::::::::::::::
CCDS74 LVLWGCRPKRPRKRRTSLKLAWRGTFCSSSLKISEDTHEDHDTSTENTDESNHDPQFEPI
        50        60        70        80        90       100       

               40        50        60        70        80        90
pF1KB8 VSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLM
       110       120       130       140       150       160       

              100       110       120       130       140       150
pF1KB8 RRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQK
       170       180       190       200       210       220       

              160       170       180       190       200 
pF1KB8 FKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ
       230       240       250       260       270        

>>CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2               (3224 aa)
 initn: 762 init1: 304 opt: 598  Z-score: 636.6  bits: 128.7 E(32554): 3.8e-29
Smith-Waterman score: 598; 50.3% identity (74.9% similar) in 199 aa overlap (1-197:1147-1339)

                                             10        20        30
pF1KB8                               MAAAKDTHEDHDTSTENTDESNHDPQFEPI
                                     . .:. .::  : .. . :...  :.:::.
CCDS20 SSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETANKNHET-DGGSAHGDDDDDGPHFEPV
       1120      1130      1140      1150       1160      1170     

                40        50        60        70        80         
pF1KB8 VSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLL
       : ::.. :.:: ::::::.:  :::::::  :.   :::::: :.::.:.:: .: ::::
CCDS20 VPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVES--KEWKERGIGNVKILRHKTSGKIRLL
        1180      1190      1200        1210      1220      1230   

      90       100       110       120        130       140        
pF1KB8 MRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHA-DFADECPKPELLAIRFLNAENA
       :::...:::::::::.: :.: :::::::..::  :: :.::: :::: ::::: . :.:
CCDS20 MRREQVLKICANHYISPDMKLTPNAGSDRSFVW--HALDYADELPKPEQLAIRFKTPEEA
          1240      1250      1260        1270      1280      1290 

      150       160       170       180       190       200        
pF1KB8 QKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
         :: :::: .. ..    ... ..: .: .....  . . :.  : ::           
CCDS20 ALFKCKFEEAQSILKAPGTNVAMASN-QAVRIVKEPTSHDNKDICKSDAGNLNFEFQVAK
            1300      1310       1320      1330      1340      1350

CCDS20 KEGSWWHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAETVFTPKTSPENVQDRFAL
             1360      1370      1380      1390      1400      1410

>--
 initn: 478 init1: 245 opt: 511  Z-score: 543.0  bits: 111.4 E(32554): 6.3e-24
Smith-Waterman score: 511; 51.5% identity (72.7% similar) in 165 aa overlap (3-167:2889-3049)

                                           10        20        30  
pF1KB8                             MAAAKDTHEDHDTSTENTDESNHDPQFEPIVS
                                     .:  . ::.: : :..   :.: .::::::
CCDS20 GDFAFGSKDKNFQWANTGAAVFGTQSVGTQSAGKVGEDEDGSDEEV-VHNEDIHFEPIVS
     2860      2870      2880      2890      2900       2910       

             40        50        60        70        80        90  
pF1KB8 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRR
       ::: :.:. ::::: ::: ::::.:.  . :. .:::::.::.:.: :  :.  :.::::
CCDS20 LPEVEVKSGEEDEEILFKERAKLYRW--DRDVSQWKERGVGDIKILWHTMKNYYRILMRR
      2920      2930      2940        2950      2960      2970     

            100       110       120       130       140       150  
pF1KB8 DKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFK
       :...:.:::: ::  :::::   :. : :: : .:.::   : : ::.:: . : :. ::
CCDS20 DQVFKVCANHVITKTMELKPLNVSNNALVW-TASDYADGEAKVEQLAVRFKTKEVADCFK
        2980      2990      3000       3010      3020      3030    

            160       170       180       190       200            
pF1KB8 TKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ           
         ::::.... . .:                                             
CCDS20 KTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAE
         3040      3050      3060      3070      3080      3090    

>--
 initn: 612 init1: 268 opt: 496  Z-score: 526.9  bits: 108.4 E(32554): 5e-23
Smith-Waterman score: 496; 43.6% identity (73.4% similar) in 188 aa overlap (6-186:1995-2175)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS20 DPNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSD----DIHFEPVVQMP
         1970      1980      1990      2000          2010      2020

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : ::::. :...:.::::: .:  . .::::: :..:.::.. .: .:.::::.
CCDS20 EKVELVTGEEDEKVLYSQRVKLFRFDAE--VSQWKERGLGNLKILKNEVNGKLRMLMRRE
             2030      2040        2050      2060      2070        

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:   .::.:   : : :: .: . : :..:: 
CCDS20 QVLKVCANHWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLEQLAAKFKTPELAEEFKQ
     2080      2090      2100       2110      2120      2130       

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS20 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
      2140      2150      2160      2170      2180      2190       

CCDS20 GSGTGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNL
      2200      2210      2220      2230      2240      2250       

>--
 initn: 485 init1: 251 opt: 434  Z-score: 460.2  bits: 96.0 E(32554): 2.6e-19
Smith-Waterman score: 434; 43.9% identity (72.3% similar) in 155 aa overlap (12-164:2294-2445)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .. :.: ..: : :::.: ::.  :..
CCDS20 TTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVS
          2270      2280      2290      2300      2310      2320   

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:. ::::.:.  ..:. .::::: ::.:.:.. ..  .:..::::..::.:
CCDS20 SGEENEQVVFSHRAKLYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
          2330      2340        2350      2360      2370      2380 

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.:.: :  ::::   : : ::.::   . :..::  :.: .
CCDS20 ANHRITPDMTLQNMKGTERVWLW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
            2390      2400       2410      2420      2430      2440

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS20 TAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADATSEVEVSST
             2450      2460      2470      2480      2490      2500

>>CCDS46394.1 RGPD8 gene_id:727851|Hs108|chr2             (1765 aa)
 initn: 510 init1: 269 opt: 478  Z-score: 511.8  bits: 104.7 E(32554): 3.5e-22
Smith-Waterman score: 478; 42.6% identity (73.4% similar) in 188 aa overlap (6-186:1019-1199)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS46 DLNFKGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSD----DIHFEPVVQMP
      990      1000      1010      1020      1030          1040    

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : :: :. :... .::::: .:  . .::::: :..:.::.. .: .:.::::.
CCDS46 EKVELVTGEEGEKVLYSQGVKLFRFDAE--VRQWKERGLGNLKILKNEVNGKLRMLMRRE
         1050      1060      1070        1080      1090      1100  

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:.. .::.:   : : :: .: . : :..:: 
CCDS46 QVLKVCANHWITTTMNLKPLSGSDRAWMWSA-SDFSDGDAKLERLAAKFKTPELAEEFKQ
           1110      1120      1130       1140      1150      1160 

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS46 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
            1170      1180      1190      1200      1210      1220 

CCDS46 GSGTGVAGASDTTIKPNAENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNL
            1230      1240      1250      1260      1270      1280 

>--
 initn: 373 init1: 255 opt: 425  Z-score: 454.7  bits: 94.2 E(32554): 5.2e-19
Smith-Waterman score: 425; 43.2% identity (71.6% similar) in 155 aa overlap (12-164:1318-1469)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .  :.: ..: : :::.: ::.  :..
CCDS46 TTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESVVTQEEERDGQYFEPVVPLPDLVEVS
      1290      1300      1310      1320      1330      1340       

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:. ::...:.  ..:. .::::: ::.:.:.. ..  .:..::::..::.:
CCDS46 SGEENEQVVFSHRAEIYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
      1350      1360        1370      1380      1390      1400     

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.::: :  ::::   : : ::.::   . :..::  :.: .
CCDS46 ANHRITPDMSLQNMKGTERVWVW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
        1410      1420       1430      1440      1450      1460    

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS46 TAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEEITRERTDVIQGDDVADAASEVEVSST
         1470      1480      1490      1500      1510      1520    

>>CCDS2082.1 RGPD5 gene_id:84220|Hs108|chr2               (1765 aa)
 initn: 510 init1: 269 opt: 478  Z-score: 511.8  bits: 104.7 E(32554): 3.5e-22
Smith-Waterman score: 478; 42.6% identity (73.4% similar) in 188 aa overlap (6-186:1019-1199)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS20 DLNFKGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSD----DIHFEPVVQMP
      990      1000      1010      1020      1030          1040    

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : :: :. :... .::::: .:  . .::::: :..:.::.. .: .:.::::.
CCDS20 EKVELVTGEEGEKVLYSQGVKLFRFDAE--VRQWKERGLGNLKILKNEVNGKLRMLMRRE
         1050      1060      1070        1080      1090      1100  

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:.. .::.:   : : :: .: . : :..:: 
CCDS20 QVLKVCANHWITTTMNLKPLSGSDRAWMWSA-SDFSDGDAKLERLAAKFKTPELAEEFKQ
           1110      1120      1130       1140      1150      1160 

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS20 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
            1170      1180      1190      1200      1210      1220 

CCDS20 GSGTGAAGASDTTIKPNAENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNL
            1230      1240      1250      1260      1270      1280 

>--
 initn: 373 init1: 255 opt: 425  Z-score: 454.7  bits: 94.2 E(32554): 5.2e-19
Smith-Waterman score: 425; 43.2% identity (71.6% similar) in 155 aa overlap (12-164:1318-1469)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .  :.: ..: : :::.: ::.  :..
CCDS20 TTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESVVTQEEERDGQYFEPVVPLPDLVEVS
      1290      1300      1310      1320      1330      1340       

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:. ::...:.  ..:. .::::: ::.:.:.. ..  .:..::::..::.:
CCDS20 SGEENEQVVFSHRAEIYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
      1350      1360        1370      1380      1390      1400     

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.::: :  ::::   : : ::.::   . :..::  :.: .
CCDS20 ANHRITPDMSLQNMKGTERVWVW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
        1410      1420       1430      1440      1450      1460    

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS20 TAQEKDSLITPHVSRSSTPRESPCGKIAVAILEETTRERTDVIQGDDVADAASEVEVSST
         1470      1480      1490      1500      1510      1520    

>>CCDS46388.1 RGPD6 gene_id:729540|Hs108|chr2             (1765 aa)
 initn: 510 init1: 269 opt: 478  Z-score: 511.8  bits: 104.7 E(32554): 3.5e-22
Smith-Waterman score: 478; 42.6% identity (73.4% similar) in 188 aa overlap (6-186:1019-1199)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS46 DLNFKGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSD----DIHFEPVVQMP
      990      1000      1010      1020      1030          1040    

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : :: :. :... .::::: .:  . .::::: :..:.::.. .: .:.::::.
CCDS46 EKVELVTGEEGEKVLYSQGVKLFRFDAE--VRQWKERGLGNLKILKNEVNGKLRMLMRRE
         1050      1060      1070        1080      1090      1100  

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:.. .::.:   : : :: .: . : :..:: 
CCDS46 QVLKVCANHWITTTMNLKPLSGSDRAWMWSA-SDFSDGDAKLERLAAKFKTPELAEEFKQ
           1110      1120      1130       1140      1150      1160 

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS46 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
            1170      1180      1190      1200      1210      1220 

CCDS46 GSGTGAAGASDTTIKPNAENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNL
            1230      1240      1250      1260      1270      1280 

>--
 initn: 373 init1: 255 opt: 425  Z-score: 454.7  bits: 94.2 E(32554): 5.2e-19
Smith-Waterman score: 425; 43.2% identity (71.6% similar) in 155 aa overlap (12-164:1318-1469)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .  :.: ..: : :::.: ::.  :..
CCDS46 TTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESVVTQEEERDGQYFEPVVPLPDLVEVS
      1290      1300      1310      1320      1330      1340       

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:. ::...:.  ..:. .::::: ::.:.:.. ..  .:..::::..::.:
CCDS46 SGEENEQVVFSHRAEIYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
      1350      1360        1370      1380      1390      1400     

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.::: :  ::::   : : ::.::   . :..::  :.: .
CCDS46 ANHRITPDMSLQNMKGTERVWVW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
        1410      1420       1430      1440      1450      1460    

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS46 TAQEKDSLITPHVSRSSTPRESPCGKIAVAILEETTRERTDVIQGDDVADAASEVEVSST
         1470      1480      1490      1500      1510      1520    

>>CCDS46358.2 RGPD1 gene_id:400966|Hs108|chr2             (1748 aa)
 initn: 508 init1: 269 opt: 476  Z-score: 509.7  bits: 104.3 E(32554): 4.6e-22
Smith-Waterman score: 476; 43.1% identity (71.8% similar) in 188 aa overlap (6-186:1004-1184)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS46 DPNFKGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSD----DIHFEPVVQMP
           980       990      1000      1010          1020         

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : :: :. :... .::::: .:  . .::::: :..:.::.. .:  :.:::::
CCDS46 EKVELVTGEEGEKVLYSQGVKLFRFDAE--ISQWKERGLGNLKILKNEVNGKPRMLMRRD
    1030      1040      1050        1060      1070      1080       

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:   .::.:   : : :: .: . : :..:: 
CCDS46 QVLKVCANHWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLERLAAQFKTPELAEEFKQ
      1090      1100      1110       1120      1130      1140      

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS46 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
       1150      1160      1170      1180      1190      1200      

CCDS46 GSGTGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDNVSSSSVHDSPLASSPVRKNI
       1210      1220      1230      1240      1250      1260      

>--
 initn: 377 init1: 255 opt: 433  Z-score: 463.4  bits: 95.7 E(32554): 1.7e-19
Smith-Waterman score: 433; 43.9% identity (72.3% similar) in 155 aa overlap (12-164:1303-1454)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .. :.: ..: : :::.: ::.  :..
CCDS46 TTGFNFSFKSALSLSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVS
           1280      1290      1300      1310      1320      1330  

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:. ::.:.:.  ..:. .::::: ::.:.:.. ..  .:..::::..::.:
CCDS46 SGEENEQVVFSHRAELYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
           1340      1350        1360      1370      1380      1390

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.::: :  ::::   : : ::.::   . :..::  :.: .
CCDS46 ANHRITPDMSLQNMKGTERVWVW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
             1400      1410       1420      1430      1440         

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS46 TAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADAASEVEVSST
    1450      1460      1470      1480      1490      1500         

>>CCDS42710.2 RGPD2 gene_id:729857|Hs108|chr2             (1756 aa)
 initn: 508 init1: 269 opt: 476  Z-score: 509.6  bits: 104.3 E(32554): 4.6e-22
Smith-Waterman score: 476; 43.1% identity (71.8% similar) in 188 aa overlap (6-186:1012-1192)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS42 DPNFKGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSD----DIHFEPVVQMP
             990      1000      1010      1020          1030       

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : :: :. :... .::::: .:  . .::::: :..:.::.. .:  :.:::::
CCDS42 EKVELVTGEEGEKVLYSQGVKLFRFDAE--ISQWKERGLGNLKILKNEVNGKPRMLMRRD
      1040      1050      1060        1070      1080      1090     

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:   .::.:   : : :: .: . : :..:: 
CCDS42 QVLKVCANHWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLERLAAQFKTPELAEEFKQ
        1100      1110      1120       1130      1140      1150    

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS42 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTEEENK
         1160      1170      1180      1190      1200      1210    

CCDS42 GSGTGAAGASDTTIKPNPENTGPTLEWDNYDLREDALDDNVSSSSVHDSPLASSPVRKNI
         1220      1230      1240      1250      1260      1270    

>--
 initn: 382 init1: 255 opt: 424  Z-score: 453.7  bits: 94.0 E(32554): 6e-19
Smith-Waterman score: 424; 43.2% identity (71.6% similar) in 155 aa overlap (12-164:1311-1462)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .. :.: ..: : :::.: ::.  :..
CCDS42 TTGFNFSFKSALSLSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVS
             1290      1300      1310      1320      1330      1340

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:.  :.:.:.  ..:. .::::: ::.:.:.. ..  .:..::::..::.:
CCDS42 SGEENEQVVFSHMAELYRY--DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLC
             1350        1360      1370      1380      1390        

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.::: :  ::::   : : ::.::   . :..::  :.: .
CCDS42 ANHRITPDMSLQNMKGTERVWVW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
     1400      1410      1420       1430      1440      1450       

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS42 TAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADAASEVEVSST
      1460      1470      1480      1490      1500      1510       

>>CCDS46379.1 RGPD3 gene_id:653489|Hs108|chr2             (1758 aa)
 initn: 506 init1: 265 opt: 476  Z-score: 509.6  bits: 104.3 E(32554): 4.6e-22
Smith-Waterman score: 476; 42.0% identity (73.4% similar) in 188 aa overlap (6-186:1020-1200)

                                        10         20        30    
pF1KB8                          MAAAKDTHEDHDT-STENTDESNHDPQFEPIVSLP
                                     : ..: :. .::..:    : .:::.:..:
CCDS46 DLNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSD----DIHFEPVVQMP
     990      1000      1010      1020      1030          1040     

            40        50        60        70        80        90   
pF1KB8 EQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRD
       :. :. : :: :. :... .::::: .:  . .::::: :..:.::.. .: .:.::.:.
CCDS46 EKVELVTGEEGEKVLYSQGVKLFRFDAE--VSQWKERGLGNLKILKNEVNGKVRMLMQRE
        1050      1060      1070        1080      1090      1100   

           100       110       120       130       140       150   
pF1KB8 KTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT
       ..::.::::.::  :.::: .::::::.:.. .::.:   : : :: .: . : :..:: 
CCDS46 QVLKVCANHWITTTMNLKPLSGSDRAWMWSA-SDFSDGDAKLERLAAKFKTPELAEEFKQ
          1110      1120      1130       1140      1150      1160  

           160            170       180       190       200        
pF1KB8 KFEECRK-----EIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ       
       :::::..      ..  .: . .:.  .  . ::....                      
CCDS46 KFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVAEEENK
           1170      1180      1190      1200      1210      1220  

CCDS46 GSGTGAAGASDTTIKPNAENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNL
           1230      1240      1250      1260      1270      1280  

>--
 initn: 376 init1: 258 opt: 432  Z-score: 462.3  bits: 95.6 E(32554): 2e-19
Smith-Waterman score: 432; 43.9% identity (72.3% similar) in 155 aa overlap (12-164:1319-1470)

                                  10        20         30          
pF1KB8                    MAAAKDTHEDHDTSTENTDESNHDPQ-FEPIVSLPEQ-EIK
                                     :  .. :.: ..: : :::.: ::.  :..
CCDS46 TTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVS
     1290      1300      1310      1320      1330      1340        

      40        50        60        70        80        90         
pF1KB8 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC
       . ::.:. .:. ::...:.  ..:. .::::: ::.:.:.. ..  .:.:::::..::.:
CCDS46 SGEENEQVVFSHRAEFYRY--DKDVGQWKERGIGDIKILQNYDNKHVRILMRRDQVLKLC
     1350      1360        1370      1380      1390      1400      

     100       110       120       130       140       150         
pF1KB8 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR
       ::: ::: : :.   :..:.::: :  ::::   : : ::.::   . :..::  :.: .
CCDS46 ANHRITPDMSLQNMKGTERVWVW-TACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAK
       1410      1420       1430      1440      1450      1460     

     160       170       180       190       200                   
pF1KB8 KEIEEREKKAGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ                  
          :.                                                       
CCDS46 TAQEKDSLITPHVSRSSTPRESPCGKIAVAVLEETTRERTDVIQGDDVADAASEVEVSST
        1470      1480      1490      1500      1510      1520     




201 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 21:42:14 2016 done: Sat Nov  5 21:42:15 2016
 Total Scan time:  1.640 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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