Result of FASTA (ccds) for pF1KE0538
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0538, 229 aa
  1>>>pF1KE0538 229 - 229 aa - 229 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6844+/-0.000988; mu= 12.5682+/- 0.061
 mean_var=81.2539+/-16.384, 0's: 0 Z-trim(105.6): 179  B-trim: 253 in 1/48
 Lambda= 0.142283
 statistics sampled from 8284 (8489) to 8284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.261), width:  16
 Scan time:  2.060

The best scores are:                                      opt bits E(32554)
CCDS77454.1 RABL2A gene_id:11159|Hs108|chr2        ( 229) 1507 318.9 1.7e-87
CCDS33683.1 RABL2B gene_id:11158|Hs108|chr22       ( 229) 1498 317.0 6.3e-87
CCDS2118.1 RABL2A gene_id:11159|Hs108|chr2         ( 228) 1490 315.4   2e-86
CCDS14102.1 RABL2B gene_id:11158|Hs108|chr22       ( 228) 1481 313.5   7e-86
CCDS77455.1 RABL2A gene_id:11159|Hs108|chr2        ( 238) 1112 237.8 4.6e-63
CCDS46738.1 RABL2B gene_id:11158|Hs108|chr22       ( 238) 1108 237.0 8.1e-63
CCDS77456.1 RABL2A gene_id:11159|Hs108|chr2        ( 165)  590 130.5 6.2e-31
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX          ( 201)  347 80.7 7.5e-16
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX         ( 201)  343 79.9 1.3e-15
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14       ( 212)  334 78.1   5e-15
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19        ( 218)  334 78.1 5.1e-15
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12        ( 201)  331 77.4 7.3e-15
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10         ( 206)  331 77.4 7.5e-15
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15        ( 216)  331 77.5 7.8e-15
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11        ( 201)  330 77.2 8.4e-15
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11         ( 203)  330 77.2 8.5e-15
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3           ( 207)  328 76.8 1.1e-14
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2          ( 205)  323 75.8 2.3e-14
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17       ( 216)  323 75.8 2.4e-14
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16        ( 256)  323 75.9 2.8e-14
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18       ( 244)  319 75.0 4.7e-14
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16        ( 190)  308 72.7 1.8e-13
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9          ( 215)  308 72.7   2e-13
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4         ( 229)  308 72.8 2.1e-13
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX         ( 237)  303 71.7 4.5e-13
CCDS9271.1 RAN gene_id:5901|Hs108|chr12            ( 216)  298 70.7 8.5e-13
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15        ( 155)  296 70.2 8.6e-13
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17       ( 228)  298 70.7 8.9e-13
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12          ( 215)  296 70.3 1.1e-12
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11          ( 208)  294 69.9 1.5e-12
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17       ( 196)  293 69.6 1.6e-12
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17       ( 223)  293 69.7 1.8e-12
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8           ( 212)  292 69.4   2e-12
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14         ( 216)  291 69.2 2.3e-12
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17         ( 216)  290 69.0 2.6e-12
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6          ( 237)  290 69.1 2.9e-12
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17         ( 249)  290 69.1   3e-12
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19        ( 213)  289 68.8   3e-12
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11          ( 208)  288 68.6 3.4e-12
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3           ( 215)  288 68.6 3.5e-12
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2          ( 200)  287 68.4 3.8e-12
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3          ( 208)  287 68.4 3.9e-12
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20       ( 194)  286 68.2 4.3e-12
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19         ( 207)  286 68.2 4.5e-12
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1           ( 203)  284 67.8 5.9e-12
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12         ( 225)  284 67.8 6.4e-12
CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1           ( 203)  282 67.4 7.9e-12
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7        ( 217)  281 67.2 9.6e-12
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19         ( 220)  280 67.0 1.1e-11
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX       ( 213)  279 66.8 1.3e-11


>>CCDS77454.1 RABL2A gene_id:11159|Hs108|chr2             (229 aa)
 initn: 1507 init1: 1507 opt: 1507  Z-score: 1684.1  bits: 318.9 E(32554): 1.7e-87
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
              130       140       150       160       170       180

              190       200       210       220         
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
              190       200       210       220         

>>CCDS33683.1 RABL2B gene_id:11158|Hs108|chr22            (229 aa)
 initn: 1498 init1: 1498 opt: 1498  Z-score: 1674.1  bits: 317.0 E(32554): 6.3e-87
Smith-Waterman score: 1498; 98.7% identity (100.0% similar) in 229 aa overlap (1-229:1-229)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       :::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS33 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
              130       140       150       160       170       180

              190       200       210       220         
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS33 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
              190       200       210       220         

>>CCDS2118.1 RABL2A gene_id:11159|Hs108|chr2              (228 aa)
 initn: 1488 init1: 917 opt: 1490  Z-score: 1665.3  bits: 315.4 E(32554): 2e-86
Smith-Waterman score: 1490; 99.6% identity (99.6% similar) in 229 aa overlap (1-229:1-228)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
       :::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS21 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
              130        140       150       160       170         

              190       200       210       220         
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
     180       190       200       210       220        

>>CCDS14102.1 RABL2B gene_id:11158|Hs108|chr22            (228 aa)
 initn: 1479 init1: 913 opt: 1481  Z-score: 1655.3  bits: 313.5 E(32554): 7e-86
Smith-Waterman score: 1481; 98.3% identity (99.6% similar) in 229 aa overlap (1-229:1-228)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       :::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS14 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
       :::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS14 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
              130        140       150       160       170         

              190       200       210       220         
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS14 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
     180       190       200       210       220        

>>CCDS77455.1 RABL2A gene_id:11159|Hs108|chr2             (238 aa)
 initn: 1293 init1: 917 opt: 1112  Z-score: 1245.7  bits: 237.8 E(32554): 4.6e-63
Smith-Waterman score: 1460; 95.4% identity (95.4% similar) in 239 aa overlap (1-229:1-238)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
               70        80        90       100       110       120

              130       140       150       160                 170
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVK----------L
       :::::::::::::::: ::::::::::::::::::::::::::::::::          :
CCDS77 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL
              130        140       150       160       170         

              180       190       200       210       220         
pF1KE0 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
     180       190       200       210       220       230        

>>CCDS46738.1 RABL2B gene_id:11158|Hs108|chr22            (238 aa)
 initn: 1284 init1: 913 opt: 1108  Z-score: 1241.2  bits: 237.0 E(32554): 8.1e-63
Smith-Waterman score: 1451; 94.1% identity (95.4% similar) in 239 aa overlap (1-229:1-238)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       :::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS46 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
               70        80        90       100       110       120

              130       140       150       160                 170
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVK----------L
       :::::::::::::::: ::::::::::::::::::::::::::::::::          :
CCDS46 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL
              130        140       150       160       170         

              180       190       200       210       220         
pF1KE0 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS46 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
     180       190       200       210       220       230        

>>CCDS77456.1 RABL2A gene_id:11159|Hs108|chr2             (165 aa)
 initn: 1042 init1: 590 opt: 590  Z-score: 668.9  bits: 130.5 E(32554): 6.2e-31
Smith-Waterman score: 918; 72.1% identity (72.1% similar) in 229 aa overlap (1-229:1-165)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       ::::::::::::                                                
CCDS77 HTATVDGKTILV------------------------------------------------
               70                                                  

              130       140       150       160       170       180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
                       ::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ----------------ADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
                             80        90       100       110      

              190       200       210       220         
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
        120       130       140       150       160     

>>CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX               (201 aa)
 initn: 349 init1: 257 opt: 347  Z-score: 398.0  bits: 80.7 E(32554): 7.5e-16
Smith-Waterman score: 347; 33.0% identity (69.2% similar) in 182 aa overlap (23-194:9-184)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
                             :.: :::..::::.::.:.. . :. : . : .. . .
CCDS14               MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLN
                             10        20        30        40      

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       .   :::. . ...:::::::::.:... .:. .  :...:... . ...:::.:  :. 
CCDS14 KDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI
         50        60        70        80        90       100      

                   130       140       150            160       170
pF1KE0 EF----RPE-IPCIVVANKIDADINVTQKSFNFAKKF-----SLPLYFVSAADGTNVVKL
        .    .:: .: ....:::  ::.  : : . :. .     . : . .:: :.:::.  
CCDS14 YYADVKEPESFPFVILGNKI--DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAA
        110       120         130       140       150       160    

              180       190       200       210       220         
pF1KE0 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :..:.: ...    ..:  :...:                                   
CCDS14 FEEAVRRVLA----TEDRSDHLIQTDTVNLHRKPKPSSSCC                  
          170           180       190       200                   

>>CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX              (201 aa)
 initn: 283 init1: 264 opt: 343  Z-score: 393.6  bits: 79.9 E(32554): 1.3e-15
Smith-Waterman score: 343; 32.4% identity (68.8% similar) in 176 aa overlap (22-189:8-183)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
                            .:.: :::..::::.::.:.. . :. : . : .. . .
CCDS14               MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLN
                             10        20        30        40      

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       .   :::. . ...:::::::::.:... .:. :  :...:... . ...::..:  :. 
CCDS14 RDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFI
         50        60        70        80        90       100      

                   130        140         150       160       170  
pF1KE0 EFR----PE-IPCIVVANKIDA-DINVTQKSFNF--AKKFSLPLYFVSAADGTNVVKLFN
        .     :: .: .:..::.:  : .:: .  .    .. . :   .:: : :::.  :.
CCDS14 YYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFE
        110       120       130       140       150       160      

            180       190       200       210       220         
pF1KE0 DAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       .:.: ... ... .  :                                        
CCDS14 EAVRQVLAVEEQLEHCMLGHTIDLNSGSKAGSSCC                      
        170       180       190       200                       

>>CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14            (212 aa)
 initn: 293 init1: 272 opt: 334  Z-score: 383.3  bits: 78.1 E(32554): 5e-15
Smith-Waterman score: 334; 29.1% identity (67.3% similar) in 199 aa overlap (23-216:10-207)

               10        20        30        40        50        60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
                             ... .:::.:::. :. ::  . :. ...:: .. .  
CCDS76              MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKM
                            10        20        30        40       

               70        80        90       100       110       120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
       .:  :::  . ...::::::::.:..  .::..:.. ..:.::. . .:...  : ... 
CCDS76 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD
        50        60        70        80        90       100       

               130       140          150       160       170      
pF1KE0 EFRPE-IPCIVVANKIDADINVT---QKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIR
       :. :: .  :...:: : . .     ... ..::.... .: .::  . :. . :.   .
CCDS76 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE
       110       120       130       140       150       160       

         180       190       200       210       220         
pF1KE0 LAV-SYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
       :.. ..... . .  .  .::    :: :::  :.   .::             
CCDS76 LVLQAHRKELEGLRMRASNELALAELE-EEEGKPEGPANSSKTCWC        
       170       180       190        200       210          




229 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 00:31:51 2016 done: Thu Nov  3 00:31:52 2016
 Total Scan time:  2.060 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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