GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:56:24

Sequence gi568815597r:31808855_32019065 : 210211 bp : 45.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   4928   4923    6                               1.05
 1.04 Term -   6493   5088 1406  2  2   54   47   417 0.205  25.47
 1.03 Intr -   7788   7690   99  1  0   58   81    47 0.003   1.08
 1.02 Intr -  26339  26276   64  2  1  109   85    52 0.676   5.29
 1.01 Init -  27822  27766   57  0  0   59  105    60 0.621   6.11
 1.00 Prom -  43821  43782   40                              -2.46

 2.04 PlyA -  47112  47107    6                               1.05
 2.03 Term -  69130  69008  123  1  0   73   54    83 0.428   1.78
 2.02 Intr - 107133 107041   93  0  0   56   75    92 0.634   4.86
 2.01 Init - 110211 110116   96  0  0   82   94   108 0.988  11.11
 2.00 Prom - 114852 114813   40                              -7.36

 3.00 Prom + 121964 122003   40                              -3.56
 3.01 Init + 123839 123894   56  1  2   89   33    21 0.512  -2.45
 3.02 Intr + 129202 129839  638  1  2   23   48   455 0.042  26.74
 3.03 Intr + 165199 165303  105  2  0   54   92    53 0.017   2.49
 3.04 Term + 169103 169161   59  0  2  115   41    56 0.647   1.45
 3.05 PlyA + 169939 169944    6                               1.05

 4.03 PlyA - 170541 170536    6                               1.05
 4.02 Term - 173895 173833   63  0  0  113   47    71 0.940   3.39
 4.01 Init - 180975 180853  123  0  0   36  100   116 0.875   7.77
 4.00 Prom - 183807 183768   40                              -2.76

 5.00 Prom + 188326 188365   40                              -7.26
 5.01 Init + 189743 189753   11  1  2   88   63     4 0.233  -2.03
 5.02 Intr + 192120 192249  130  0  1   79   86    41 0.205   3.70
 5.03 Intr + 198475 198553   79  0  1   85   87    33 0.447   2.02
 5.04 Intr + 204753 205523  771  1  0   52  110   605 0.659  50.55
 5.05 Intr + 205881 205980  100  1  1   64   78    66 0.301   2.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  40137  40277  141  2  0   97   55    69 0.824   2.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:31808855_32019065|GENSCAN_predicted_peptide_1|541_aa
MPTEVIGMEVYIKETLQEEPTQHEDDKVVKTFMMIHDLFPRTWMELEAIILSKLMQERKN
QILHVLTYKWELNGRWTDMSQAGDVEGPSTGDPVLSPQHNCELLQNMEGASSMPGLSPDG
PGASSGPGVRAGSRRKIPRKEALRGGSSRAAGAAEVRPGVLELLAVVQSRGSMLAPGLHM
QLPSVPTQGRALTSKRLQVSLCDILDDSCPRKLCSRSAGLPERALACRERLAGVEEVSCL
RPREARDGGMSSPGCDRRSPTLSKEEPPGRPLTSSPDPVPVRVRKKWRRQGAHSECEEGA
GDFLWLDQSPRGDNLLSVGDPPQVADLESLGGPCRPPSPKDTGSGPGEPGGSGAGCASGT
EKFGYLPATGDGPQPGSPCGPVGFPVPSGGESLSSAAQAPPQSAALCLGASAQASAEQQE
AVCVVRTGSDEGQAPAQDQEELEAKAQPASRGRLEQGLAAPADTCASSREPLGGLSSSLD
TEASRACSGPFMEQRRSKGTKNLKKGPVPCAQDRGTDRSSDNSHQDRPEEPSPGGCPRLV
S

>gi568815597r:31808855_32019065|GENSCAN_predicted_CDS_1|1626_bp
atgccaacagaggtgataggcatggaggtgtacatcaaggaaaccctccaggaggagcct
actcagcatgaagacgacaaggttgtgaagacctttatgatgatccatgatctgtttcca
cgaacgtggatggagctggaggccattatccttagcaaactaatgcaggaacggaaaaac
caaatattgcatgttctcacttataagtgggagctaaatggtaggtggacagacatgtcc
caggcgggggacgtagaaggccccagcacaggagaccctgtgctcagtccccaacacaac
tgtgagcttttacagaacatggaaggagccagctccatgccaggcctgtcaccagatggg
ccgggagcaagctctgggcccggagtcagggctggcagcagaaggaagatccccaggaag
gaggcccttcgaggtggcagctcccgggctgcaggtgctgctgaggtccggccaggggtc
ttggagctgctagctgtggtacagagccggggctcgatgctggctcctgggctccacatg
cagctgccctcggtgcctactcaggggagagctctgacctccaagaggctccaggtttct
ctgtgtgacatcttagatgacagttgccccaggaaactttgtagcaggtctgctggcctc
ccagagagagctctggcctgcagggagaggcttgcaggagtggaggaggtgagctgcctc
aggcccagggaggccagagacggtggaatgagttctccagggtgtgacagaagaagcccc
acactcagcaaagaggagccccctggaaggcccctgacatcctcaccagacccagtccct
gtgagggtaagaaagaaatggaggaggcaaggggctcattcagagtgtgaggaaggggct
ggtgacttcctgtggcttgatcagagccctcgtggggacaacctcctgtctgtgggagac
cctccccaagttgctgacctggagtccttgggaggcccttgcagacctccctctccaaaa
gacactgggtctgggcctggagagccaggtggaagtggggcaggatgtgcctcagggact
gagaaatttggatatttgcccgctacaggggatgggccccagccaggcagcccctgtggc
cctgtcgggttcccagtgcccagtggaggggagtccctcagttcagctgcacaggctcct
ccacagagcgcagcactgtgcctgggggcgtcagcacaggcctctgcagagcagcaagaa
gctgtgtgtgtcgtgcggactggcagcgatgaaggccaggctccagcacaggaccaggag
gagctggaggccaaggctcagccagcttccaggggaaggctggagcaaggactcgctgcc
cccgctgacacctgtgccagctcccgggagcccttgggcggcctcagctcctccctggat
actgaagccagcagggcctgctcaggcccattcatggagcagagaagatccaagggcact
aagaacctgaagaaaggtccagtgccctgtgcccaagaccggggcacagacagaagctca
gacaactcccaccaggacaggccagaggaacccagcccaggaggctgccccagactggtg
agctga

>gi568815597r:31808855_32019065|GENSCAN_predicted_peptide_2|103_aa
MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEKEGI
HVLVLGSGTGDMSTKVCFPQKQTLRHGLQCTVIQEVQETPVED

>gi568815597r:31808855_32019065|GENSCAN_predicted_CDS_2|312_bp
atgaaccgtccagcccctgtggagatctcctatgagaacatgcgttttctgataactcac
aaccctaccaatgctactctcaacaagttcacagaggaacttaagaagtatggagtgacg
actttggttcgagtttgtgatgctacatatgataaagctccagttgaaaaagaaggaatc
cacgttctagtcctgggaagtggcacaggagacatgtcaacaaaagtctgcttcccccag
aagcagaccctgagacatggacttcagtgcacagtaattcaggaagtacaggaaacacca
gtagaggactga

>gi568815597r:31808855_32019065|GENSCAN_predicted_peptide_3|285_aa
MGNCGKQTASIAVQLLSWSHLGGGGGGGSGGGGGDDSPPASARDTRPGPAAAAAARLHES
VLLLLLRPPLRLLLPPLPPLPPLPCGVTSRRARPPLPLQPLPDRRRLQPGRSRRHHHRCA
RSRNQLPPPPLRGRCGARRAGPPARPPRSLTGWLAGSRAVGPAHLPRGALTHCPGRLPRS
SSSWFVPLRTPGYGRRVHVIGEGRQNVAWGVARPRCAPPIRTWAGSRACSREQNMRLVTG
NPKMKDSVPTLTPNAENLVKAFNKLSDPVSPVAEPKKEPEGKAAC

>gi568815597r:31808855_32019065|GENSCAN_predicted_CDS_3|858_bp
atggggaactgtggaaagcagacagctagtattgctgtgcagcttctttcatggagtcac
ctcggcggcggcggcggcggcggtagcggtggcggcggcggcgacgactcccccccagcc
tcggcgcgcgacacccggcccggcccggcggcggcggcggcggcgcgtctccacgagtcc
gtcttgctgctgctgctgcggccgccgctgcgtctcctgctgccgccgctgcctccgctg
ccgccgctgccctgtggcgtcacctcgcgccgtgcccggccgccgctgccgctccagccg
ctcccggacagacgacggttacagcccggccgatcgcgccgccaccaccaccgctgcgcg
cgcagccggaaccagctcccgccgccgcccctcagggggcgctgcggggcgcggcgcgca
gggccaccggcccgccctccgcgttcgctgactggctggctggccggctcgcgggcagtt
gggcccgcccacctgccccgcggggcgctgacccactgccctgggcgcctcccccgctcc
tcctcctcgtggttcgttccgctccgcactcccggctacggaaggcgagtccatgtgatc
ggggagggaaggcagaacgtggcctggggagtcgctcgcccacgctgcgccccgcccatc
cgcacctgggctgggtcgagggcctgcagccgagaacaaaacatgcgtttagttactgga
aacccgaaaatgaaagattctgtacctaccctcactcccaatgcagaaaacttagtcaaa
gctttcaacaaactctcagacccagtgtccccagtggctgagcccaagaaggagccagaa
ggcaaagcagcctgctga

>gi568815597r:31808855_32019065|GENSCAN_predicted_peptide_4|61_aa
MKKVKDAGKRMMIRYPQQLIFPEHLLHAWALVITGLYPVDKATPGHPDWPIIFILTDSVN
V

>gi568815597r:31808855_32019065|GENSCAN_predicted_CDS_4|186_bp
atgaaaaaggtgaaggatgccggaaagaggatgatgattcggtacccacagcagctaata
tttcctgagcatcttctgcatgcttgggccctggtaataacaggactttatcctgttgac
aaggccactccagggcacccagactggcccatcatcttcatcctcacggactctgtgaat
gtttag

>gi568815597r:31808855_32019065|GENSCAN_predicted_peptide_5|364_aa
MLIRTYFYPVYLVFICLPYVESSTKAGTLSILFTAYPTSSTMAGIYSVPTVGVPDDPVGR
TQTIMRVAKGKPQKRGGDTCSASAESRGKRNERSPLPPAHAHQALAWRERRESQSREATS
RTPRRCAGAVAGLGTLFSAEKPKGGAGGWLRTRAASFPVLSLAGSLGSASVATAPALPPP
PTAARASVAAASLSRSLDRTSSQMQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQ
PPLPHRSRGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKM
EPENKYLPELMAEKDSLDPSFTHAMQLLTAGKPFLIAGGDERLDRGVGGEDSQSGEGPWE
EGPS

>gi568815597r:31808855_32019065|GENSCAN_predicted_CDS_5|1092_bp
atgctgataagaacttatttctaccctgtttacttggtgtttatctgtctcccctatgta
gaaagcagcacaaaagcaggaaccctgtctatcctgtttaccgcttaccccacatccagt
acaatggctggcatctattcggtgcctactgtgggagtgcctgatgaccctgtgggcagg
actcagactattatgagggtggcaaagggcaagcctcaaaaaaggggaggagacacgtgt
tccgctagcgccgagtcacgtggaaaacgaaacgaacggagcccactgcctcccgcgcat
gcgcatcaagctctggcctggcgggagcggagggaaagccagagtcgggaggcgacttct
cggacgccgcggcggtgcgcaggcgccgtggccggactggggactttgttctccgcggag
aaacccaagggcggtgccggtggctggctgcgcacgcgcgccgcctcatttccggtgctc
tctctcgctgggtcgctcgggtcggcttcggtcgctaccgctcccgctctgccacccccg
ccaaccgccgctcgggcctccgtcgctgccgcgtcgctttctcgctccttggatcgcaca
tcctcccagatgcagcgccgggacgaccccgccgcgcgcatgagccggtcttcgggccgt
agcggctccatggacccctccggtgcccacccctcggtgcgtcagacgccgtctcggcag
ccgccgctgcctcaccggtcccggggaggcggagggggatcccgcgggggcgcccgggcc
tcgcccgccacgcagccgccaccgctgctgccgccctcggccacgggtcccgacgcgaca
gtgggcgggccagcgccgaccccgctgctgcccccctcggccacagcctcggtcaagatg
gagccagagaacaagtacctgcccgaactcatggccgagaaggactcgctcgacccgtcc
ttcactcacgccatgcagctgctgacggcagggaaaccctttttgatcgcgggtggcgat
gagcgcctcgaccgaggtgtaggaggtgaagacagccagagcggggagggaccgtgggag
gaagggccgagn