Result of FASTA (ccds) for pF1KB7775
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7775, 453 aa
  1>>>pF1KB7775 453 - 453 aa - 453 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9526+/-0.00101; mu= 14.2341+/- 0.060
 mean_var=68.9540+/-13.553, 0's: 0 Z-trim(103.6): 43  B-trim: 0 in 0/51
 Lambda= 0.154452
 statistics sampled from 7485 (7507) to 7485 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.231), width:  16
 Scan time:  2.490

The best scores are:                                      opt bits E(32554)
CCDS9654.1 PPP2R3C gene_id:55012|Hs108|chr14       ( 453) 3005 678.9 2.8e-195
CCDS3088.1 PPP2R3A gene_id:5523|Hs108|chr3         ( 529)  432 105.6 1.3e-22
CCDS54642.1 PPP2R3A gene_id:5523|Hs108|chr3        ( 414)  427 104.4 2.2e-22
CCDS3087.1 PPP2R3A gene_id:5523|Hs108|chr3         (1150)  432 105.7 2.6e-22
CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrX       ( 575)  402 98.9 1.4e-20
CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrY       ( 575)  402 98.9 1.4e-20


>>CCDS9654.1 PPP2R3C gene_id:55012|Hs108|chr14            (453 aa)
 initn: 3005 init1: 3005 opt: 3005  Z-score: 3619.3  bits: 678.9 E(32554): 2.8e-195
Smith-Waterman score: 3005; 100.0% identity (100.0% similar) in 453 aa overlap (1-453:1-453)

               10        20        30        40        50        60
pF1KB7 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 YRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 ENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 DVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 QDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 YGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 LNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
              370       380       390       400       410       420

              430       440       450   
pF1KB7 TTILIDLNGFWTYENREALVANDSENSADLDDT
       :::::::::::::::::::::::::::::::::
CCDS96 TTILIDLNGFWTYENREALVANDSENSADLDDT
              430       440       450   

>>CCDS3088.1 PPP2R3A gene_id:5523|Hs108|chr3              (529 aa)
 initn: 364 init1: 199 opt: 432  Z-score: 519.6  bits: 105.6 E(32554): 1.3e-22
Smith-Waterman score: 432; 24.5% identity (59.3% similar) in 364 aa overlap (103-451:108-466)

             80        90       100       110       120       130  
pF1KB7 KLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGA
                                     :.. .:  :  ::   .  .. :...  : 
CCDS30 NVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCG-
        80        90       100       110       120       130       

            140       150       160       170         180       190
pF1KB7 KCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIG--LSLYDVAGQGYLRE
        :  .. : .: .    .. : .. ..:. .  . .  :.   .  . :    . . :..
CCDS30 -CPLYWKAPMF-RAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQ
         140        150       160       170       180       190    

              200       210         220       230       240        
pF1KB7 SDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSF
        :.   . ... : : :  :. .  :.: :. :.....:. ..   .:::   .:   .:
CCDS30 EDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNF
          200       210       220       230       240       250    

      250       260       270       280       290       300        
pF1KB7 LDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTN
       :. :  :..::    .: :..::      .: .. .:: ::. ..:. .::::.  . ..
CCDS30 LQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSS
          260         270       280       290       300       310  

      310       320             330       340       350       360  
pF1KB7 VFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLN
        ...:.:.  .:       .:.:.:  .. :... :....:....: :. .:... : :.
CCDS30 RIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLS
            320       330       340       350       360       370  

            370       380       390       400       410       420  
pF1KB7 VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTT
       .. :.::..   : :.  : .:. :.:.  ...:.:::    ::.:.::    ..     
CCDS30 MYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYD
            380       390       400       410       420       430  

            430            440       450                           
pF1KB7 ILIDLNGFWTYENREAL-----VANDSENSADLDDT                        
        ...:. .  .:.:. .     : ::. . .: :                          
CCDS30 TFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFED
            440       450       460       470       480       490  

CCDS30 YETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
            500       510       520         

>>CCDS54642.1 PPP2R3A gene_id:5523|Hs108|chr3             (414 aa)
 initn: 336 init1: 199 opt: 427  Z-score: 515.3  bits: 104.4 E(32554): 2.2e-22
Smith-Waterman score: 427; 24.4% identity (59.5% similar) in 353 aa overlap (114-451:4-351)

            90       100       110       120       130       140   
pF1KB7 QRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGAKCKQFFTAKVF
                                     ::   .  .. :...  :  :  .. : .:
CCDS54                            MDIEEQKADIYEMGKIAKVCG--CPLYWKAPMF
                                          10        20          30 

           150       160       170         180       190       200 
pF1KB7 AKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIG--LSLYDVAGQGYLRESDLENYILELI
        .    .. : .. ..:. .  . .  :.   .  . :    . . :.. :.   . ...
CCDS54 -RAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVV
               40        50        60        70        80        90

             210         220       230       240       250         
pF1KB7 PTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRDEE
        : : :  :. .  :.: :. :.....:. ..   .:::   .:   .::. :  :..::
CCDS54 DTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEE
              100       110       120       130       140       150

     260       270       280       290       300       310         
pF1KB7 LSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECL
           .: :..::      .: .. .:: ::. ..:. .::::.  . .. ...:.:.  .
CCDS54 --DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAV
                160       170       180       190       200        

     320             330       340       350       360       370   
pF1KB7 TY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAI
       :       .:.:.:  .. :... :....:....: :. .:... : :... :.::..  
CCDS54 TRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQ
      210       220       230       240       250       260        

           380       390       400       410       420       430   
pF1KB7 QELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTY
        : :.  : .:. :.:.  ...:.:::    ::.:.::    ..      ...:. .  .
CCDS54 CERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDH
      270       280       290       300       310       320        

                440       450                                      
pF1KB7 ENREAL-----VANDSENSADLDDT                                   
       :.:. .     : ::. . .: :                                     
CCDS54 EQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSE
      330       340       350       360       370       380        

>>CCDS3087.1 PPP2R3A gene_id:5523|Hs108|chr3              (1150 aa)
 initn: 366 init1: 199 opt: 432  Z-score: 514.0  bits: 105.7 E(32554): 2.6e-22
Smith-Waterman score: 432; 24.5% identity (59.3% similar) in 364 aa overlap (103-451:729-1087)

             80        90       100       110       120       130  
pF1KB7 KLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGA
                                     :.. .:  :  ::   .  .. :...  : 
CCDS30 NVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCG-
      700       710       720       730       740       750        

            140       150       160       170         180       190
pF1KB7 KCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIG--LSLYDVAGQGYLRE
        :  .. : .: .    .. : .. ..:. .  . .  :.   .  . :    . . :..
CCDS30 -CPLYWKAPMF-RAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQ
        760        770       780       790       800       810     

              200       210         220       230       240        
pF1KB7 SDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSF
        :.   . ... : : :  :. .  :.: :. :.....:. ..   .:::   .:   .:
CCDS30 EDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNF
         820       830       840       850       860       870     

      250       260       270       280       290       300        
pF1KB7 LDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTN
       :. :  :..::    .: :..::      .: .. .:: ::. ..:. .::::.  . ..
CCDS30 LQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSS
         880         890       900       910       920       930   

      310       320             330       340       350       360  
pF1KB7 VFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLN
        ...:.:.  .:       .:.:.:  .. :... :....:....: :. .:... : :.
CCDS30 RIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLS
           940       950       960       970       980       990   

            370       380       390       400       410       420  
pF1KB7 VFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTT
       .. :.::..   : :.  : .:. :.:.  ...:.:::    ::.:.::    ..     
CCDS30 MYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYD
          1000      1010      1020      1030      1040      1050   

            430            440       450                           
pF1KB7 ILIDLNGFWTYENREAL-----VANDSENSADLDDT                        
        ...:. .  .:.:. .     : ::. . .: :                          
CCDS30 TFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFED
          1060      1070      1080      1090      1100      1110   

CCDS30 YETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
          1120      1130      1140      1150

>>CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrX            (575 aa)
 initn: 284 init1: 186 opt: 402  Z-score: 482.9  bits: 98.9 E(32554): 1.4e-20
Smith-Waterman score: 405; 24.3% identity (62.3% similar) in 313 aa overlap (153-452:192-501)

            130       140       150       160       170            
pF1KB7 FLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWL--HQTRIGL-SL
                                     : .:. .:   . ::.    :.    .  :
CCDS14 MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVA-MWRKILQNCHDDAAKFVHL
             170       180       190       200        210       220

     180       190       200       210         220       230       
pF1KB7 YDVAGQGYLRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGK
           : .:: . :.  .. ... : : :. :...  :.: :. :.....:. ..   .:.
CCDS14 LMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGR
              230       240       250       260       270       280

       240       250       260       270       280       290       
pF1KB7 IKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEE
       :   ..   :::...  :  :: .  .: :..::      .: .. .:: ::. ... ..
CCDS14 ITCAELRRSSFLQNVALL--EEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADD
              290         300       310       320       330        

       300       310       320             330       340       350 
pF1KB7 LSRYGTATMTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFK
       :.:..  .... ..::.:.  .:       .:...:  .. :... :..: :....: :.
CCDS14 LARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFR
      340       350       360       370       380       390        

             360       370       380       390       400       410 
pF1KB7 LLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDL
        .:... : :..: :.::..   . .   . . . :::   ...:.:::.   ::.::::
CCDS14 CMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDL
      400       410       420       430       440       450        

             420       430         440       450                   
pF1KB7 INSNQGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDDT                
          . ...    ..... .  .:..:  .:. . . .. .:.:                 
CCDS14 KRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEET
      460       470       480       490       500       510        

CCDS14 AGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
      520       530       540       550       560       570     

>>CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrY            (575 aa)
 initn: 284 init1: 186 opt: 402  Z-score: 482.9  bits: 98.9 E(32554): 1.4e-20
Smith-Waterman score: 405; 24.3% identity (62.3% similar) in 313 aa overlap (153-452:192-501)

            130       140       150       160       170            
pF1KB7 FLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWL--HQTRIGL-SL
                                     : .:. .:   . ::.    :.    .  :
CCDS14 MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVA-MWRKILQNCHDDAAKFVHL
             170       180       190       200        210       220

     180       190       200       210         220       230       
pF1KB7 YDVAGQGYLRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGK
           : .:: . :.  .. ... : : :. :...  :.: :. :.....:. ..   .:.
CCDS14 LMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGR
              230       240       250       260       270       280

       240       250       260       270       280       290       
pF1KB7 IKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEE
       :   ..   :::...  :  :: .  .: :..::      .: .. .:: ::. ... ..
CCDS14 ITCAELRRSSFLQNVALL--EEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADD
              290         300       310       320       330        

       300       310       320             330       340       350 
pF1KB7 LSRYGTATMTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFK
       :.:..  .... ..::.:.  .:       .:...:  .. :... :..: :....: :.
CCDS14 LARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFR
      340       350       360       370       380       390        

             360       370       380       390       400       410 
pF1KB7 LLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDL
        .:... : :..: :.::..   . .   . . . :::   ...:.:::.   ::.::::
CCDS14 CMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDL
      400       410       420       430       440       450        

             420       430         440       450                   
pF1KB7 INSNQGDTVTTILIDLNGFWTYENRE--ALVANDSENSADLDDT                
          . ...    ..... .  .:..:  .:. . . .. .:.:                 
CCDS14 KRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEET
      460       470       480       490       500       510        

CCDS14 AGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
      520       530       540       550       560       570     




453 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:14:43 2016 done: Fri Nov  4 22:14:44 2016
 Total Scan time:  2.490 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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