GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:01:26

Sequence gi568815595r:146094414_146320927 : 226514 bp : 36.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   8439   8342   98  1  2   90  115    76 0.900   9.31
 1.06 Intr -   9929   9866   64  2  1   98   57    39 0.767  -0.83
 1.05 Intr -  12231  12119  113  1  2  112   61   129 0.999  11.78
 1.04 Intr -  16035  15872  164  2  2   46  105   151 0.995  11.30
 1.03 Intr -  26835  26699  137  0  2   83   58   145 0.964   9.45
 1.02 Intr -  29816  29725   92  0  2  126   86    43 0.873   6.69
 1.01 Init -  46502  46406   97  2  1   68  115    11 0.037   2.32
 1.00 Prom -  60138  60099   40                              -2.55

 2.11 PlyA -  60344  60339    6                               1.05
 2.10 Term -  66217  66081  137  2  2   93   41    78 0.295   0.80
 2.09 Intr -  66664  66468  197  0  2   20   99   164 0.036   8.84
 2.08 Intr -  73334  73279   56  2  2   28  103    74 0.008  -0.24
 2.07 Intr - 100869 100711  159  0  0   81   61   175 0.351  13.36
 2.06 Intr - 102380 102219  162  2  0  104   52   126 0.997   9.85
 2.05 Intr - 105626 105400  227  0  2   74   55   127 0.234   4.78
 2.04 Intr - 109294 109108  187  1  1   34   57   127 0.286   2.54
 2.03 Intr - 112348 112113  236  2  2   88   78   181 0.878  13.58
 2.02 Intr - 126512 126402  111  0  0   97   94    72 0.967   8.13
 2.01 Init - 131110 130930  181  1  1   72   44   215 0.618  13.01
 2.00 Prom - 137573 137534   40                              -4.05

 3.06 PlyA - 137690 137685    6                               1.05
 3.05 Term - 147885 147652  234  0  0   22   43   154 0.222  -0.36
 3.04 Intr - 156224 156144   81  2  0   77   98    30 0.385   1.82
 3.03 Intr - 156602 156547   56  0  2   93  101    71 0.972   6.68
 3.02 Intr - 162596 161966  631  2  1  -19   67   322 0.454  10.21
 3.01 Init - 163298 163191  108  2  0   50   20   128 0.447   2.47
 3.00 Prom - 186514 186475   40                              -3.45

 4.03 PlyA - 188444 188439    6                               1.05
 4.02 Term - 189883 189704  180  1  0  114   42    65 0.416   1.13
 4.01 Init - 195744 195067  678  0  0   42   86   340 0.140  24.38
 4.00 Prom - 196879 196840   40                              -8.25

 5.07 PlyA - 197358 197353    6                               1.05
 5.06 Term - 198160 197616  545  2  2  -52   37   283 0.595   2.64
 5.05 Intr - 198874 198629  246  2  0   14   71   161 0.241   3.51
 5.04 Intr - 207773 207605  169  2  1   33   80    99 0.653   2.20
 5.03 Intr - 212229 212119  111  0  0   45   86    55 0.509   0.66
 5.02 Intr - 212609 212420  190  1  1   46   85   132 0.819   7.37
 5.01 Init - 222465 221990  476  0  2   80   45   272 0.682  17.10
 5.00 Prom - 224284 224245   40                              -3.65


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  58589  58782  194  0  2    4   47   234 0.822   7.50
S.002 Init -  66576  66468  109  0  1   71   99   147 0.814  13.18
S.003 Term +  88742  89258  517  2  1   78   54   212 0.803   9.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:146094414_146320927|GENSCAN_predicted_peptide_1|255_aa
MWKTFCLGPLIIGINSSVDLDVLGKYPIIGKYDKLLVITVATKESDGFHRFMQSAKYFNY
TVKVLGQGEEWRGGDGINSIGGGQKVRLMKEVMEHYADQDDLVVMFTECFDVIFAGGPEE
VLKKFQKANHKVVFAADGILWPDKRLADKYPVVHIGKRYLNSGGFIGYAPYVNRIVQQWN
LQDNDDDQLFYTKVYIDPLKREAINITLDHKCKIFQTLNGAVDEVVLKFENGKARAKNTF
YETLPVAINGNGPTK

>gi568815595r:146094414_146320927|GENSCAN_predicted_CDS_1|765_bp
atgtggaaaacattctgtctggggccacttattataggaataaacagctctgtagattta
gatgttctggggaagtaccctatcattggaaaatatgataaattattagtcataactgta
gcaacaaaagaaagtgatggattccatcgatttatgcagtcagccaaatatttcaattat
actgtgaaggtccttggtcaaggagaagaatggagaggtggtgatggaattaatagtatt
ggagggggccagaaagtgagattaatgaaagaagtcatggaacactatgctgatcaagat
gatctggttgtcatgtttactgaatgctttgatgtcatatttgctggtggtccagaagaa
gttctaaaaaaattccaaaaggcaaaccacaaagtggtctttgcagcagatggaattttg
tggccagataaaagactagcagacaagtatcctgttgtgcacattgggaaacgctatctg
aattcaggaggatttattggctatgctccatatgtcaaccgtatagttcaacaatggaat
ctccaggataatgatgatgatcagctcttttacactaaagtttacattgatccactgaaa
agggaagctattaacatcacattggatcacaaatgcaaaattttccagaccttaaatgga
gctgtagatgaagttgttttaaaatttgaaaatggcaaagccagagctaagaatacattt
tatgaaacattaccagtggcaattaatggaaatggacccaccaag

>gi568815595r:146094414_146320927|GENSCAN_predicted_peptide_2|550_aa
MGSCAARASPTSTTPCSTAPSPIDHPRAEECKRMARDWQAAPPAALLRDPLGEASCAPES
GVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYS
PQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQAEKG
EEATEKKSLKLAEVGSQGLRGEKRHFCNIEVQGEAASPDVEAAVSFSEDPNYNKIIDEVM
TCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFR
CTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYG
CGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDLDVKMKAMIFGACFL
ILCQNRDDQNQQTKSHGKDRADPGLCVLARSAALRGRGRLSPRGPRGPNMGGCTVKPQLL
LLALVLHPWNPCLGADSEKPSSIPTEQVGVSFWTCRSWAPTPFLQLSFPLLSESWHGFIL
DGRGSTPSVT

>gi568815595r:146094414_146320927|GENSCAN_predicted_CDS_2|1653_bp
atgggctcctgtgcggcccgagcctccccgacgagcaccaccccctgctccaccgcaccc
agtcccatcgaccacccaagggctgaggagtgcaagcgcatggcacgggactggcaggca
gctccacctgcagccctgctgcgggatccactaggtgaagccagctgtgctcctgagtct
ggtgtggtacccacagcccctgaacagcctgcaggtgaaatggaaaatcaaacaaaacca
ccagatccaaggcctgatgctcctcctgaatacaattctcattttttaccaggaccccct
ggaacagctgtccctccacctactggctacccaggaggcttgcctatgggatactacagt
ccacagcaacccagtaccttccctttgtaccagccagttggtggtatccatcctgtccgg
tatcagcctggcaaatatcctatgccaaatcagtctgttccaataacatggatgccaggg
ccaactcctatggcaaactgccctcctggtctggaatacttagttcaggctgagaaaggt
gaggaagctacagaaaaaaaaagtttgaagctggcagaggttggctcacaaggcttaagg
ggggaaaaaaggcacttttgtaacatagaagtgcaaggtgaagcagcaagtcctgatgta
gaagctgcagtaagtttttcagaagatcctaactataacaagatcattgatgaagtgatg
acatgttttgaaactaataatagatatgatattaaaaacaactcagaccagatggtttac
attgtaaccgaagacacagatgactttaccaggaatgcctatcggacactaaggcccttc
gtcctccgggtcactgattgtatgggccgagaaatcatgacaatgcagagacccttcaga
tgcacctgctgttgcttctgttgcccctctgccagacaagagctggaggtgcagtgtcct
cctggtgtcaccattggctttgttgcggaacattggaacctgtgcagggcggtgtacagc
atccaaaatgagaagaaagaaaatgtgatgagagttcgtgggccatgctcaacctatggc
tgtggttcagattctgtttttgaggtcaaatcccttgatggcatatccaacatcggcagt
attatccggaagtggaatggtttgttatcagcaatggcagatgctgaccattttgacatt
cacttcccactagacctggatgtgaagatgaaagccatgatttttggagcttgcttcctc
attctctgccagaatagggatgatcagaaccagcagactaagagccatgggaaagacagg
gcggacccgggtctctgcgttctcgcgagaagcgcggcgctgcggggccgtgggcgcctg
agcccgcgcggccctcgagggccgaatatggggggatgcacggtgaagcctcagctgctg
ctcctggcgctcgtcctccacccctggaatccctgtctgggtgcggactcggagaagccc
tcgagcatccccacagaacaagttggagtttccttttggacttgcaggtcatgggcacca
acacctttcctgcagctctcctttcccctcctttccgagagttggcatggatttatcctt
gatggacgaggcagtactccttctgtgacctaa

>gi568815595r:146094414_146320927|GENSCAN_predicted_peptide_3|369_aa
MDSEVQTEEVSDGNKEFIGNRSEGSPRYALAKNLAAYAGPWYASLKKTWQLSTRFQRMYK
KAWLPGQEPATGAESSQRISTRTAQRGNVGLEPQHRGPTRALPNGAVGNVGLEPQHRVPT
RALPNGAVGRGLPAFRPQNGRATDSLQPHPGTKTGNQLQPMRVAMGATSWNATGVELPKV
LGAHYLHQCALDVGHGVKGDFGALRFNDCSVGMQTCVGPIAPFVWPISPFWNGNVYPMPV
PPQYLVVQLDPASGVPGAQHSAGQAVSLDWVSHGSLAFLRRGSHGLRPGHSQKNFRQIQQ
SLSERKTIHESGSPQNQKSFRELHRATWAGSIHKQRKEVTYINQLIGSSLVFALFGHGVM
RHLPSTDMV

>gi568815595r:146094414_146320927|GENSCAN_predicted_CDS_3|1110_bp
atggacagtgaagtccagactgaggaggtctcagatggaaataaggaatttattgggaac
aggagtgaaggtagcccccgttacgccctcgcaaagaacttagctgcatatgcaggccca
tggtatgcaagtttgaagaagacttggcagctttccactcgatttcagaggatgtataag
aaagcttggctgcccgggcaggagcctgctacaggggcagagtcctcacagagaatctct
actaggacagcacagaggggaaatgtggggttggagccccaacacagaggccccacgagg
gcactacctaatggagctgtgggaaatgtggggttggagccccaacacagagtccccacg
agggcactacctaatggagctgtggggagggggctgccagccttcagaccccagaatggt
agagccactgacagcttgcaacctcatcctggaaccaaaacaggcaaccaactccaacct
atgagagtagccatgggggctacatcctggaatgccacaggggtggagctgcccaaggtg
ttgggagcccactacttgcatcagtgtgccctggatgtgggacatggagtcaaaggagat
tttggagctttgagattcaatgactgctctgttgggatgcagacttgtgtggggcctatt
gcccctttcgtttggccaatttctcccttttggaatgggaatgtttacccaatgcctgta
ccaccacagtatcttgtagtacaactagacccggcgtctggcgtccccggtgcccagcat
tctgcggggcaggcggtctcgcttgattgggtttctcatgggtctctggcgtttctacgg
cgcggctctcacggactcaggccaggccactcgcagaaaaactttaggcaaattcagcag
agtttatctgagcgaaaaacgattcatgaatcaggcagccctcagaaccagaagagtttc
agagagctccaccgagcaacatgggcaggcagtattcataaacagaggaaagaagtgacg
tacataaatcagttgattggatccagcctggtatttgctttatttggtcatggtgtgatg
aggcatttgccttcaacggacatggtctga

>gi568815595r:146094414_146320927|GENSCAN_predicted_peptide_4|285_aa
MIISIDAEKAFDKIQQPFMLKTLNKLDIDGTYLKIIRAIYGKPTANIILNGQKLEAFPLK
TGTRQGCSLSPLLFNIVLEVLARAIQQEKEIKTIKLGKEEVKLSVFADDMIVYLENSIIS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMGELPFTIASKRIKYLEIQLT
RDVKDLFKENYKRLLNQIKEDTNKWKNIQCSWIGRINIMKMAILPKSRVLLKCGFESVTL
TSSGNFYKRQIHGSNSRPTGSETLEMGHSNLCWEKGLWGACINWP

>gi568815595r:146094414_146320927|GENSCAN_predicted_CDS_4|858_bp
atgattatctcaatagatgcagaaaaggccttcgacaaaattcaacagcccttcatgcta
aaaactctcaataaactagatattgatgggacatatctcaaaataataagagctatttat
ggcaaacccacagccaatatcatactgaatgggcaaaaactagaagcattccctttgaaa
actggcacaagacagggatgttctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaatccagcaagagaaagaaataaagactattaaattaggaaaagaggaa
gtcaaattgtccgtgtttgcagatgacatgattgtttatttagaaaactccatcatctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatg
ggtgaactcccattcacaattgcttcaaagagaataaaatacctagaaattcaactcaca
agggatgtgaaggacctcttcaaggagaactacaaacgactgctcaaccaaataaaagag
gacacaaacaaatggaagaacattcaatgctcgtggataggaagaatcaatatcatgaaa
atggccatactgcccaagagcagagtgttactcaaatgtggctttgagtcagtgacatta
acatcatctgggaacttctacaaaaggcaaattcatgggtccaactctagacctactgga
tcagaaactctggaaatgggacatagcaatctgtgttgggaaaaaggcttatggggtgct
tgtataaactggccataa

>gi568815595r:146094414_146320927|GENSCAN_predicted_peptide_5|578_aa
MVPCIPAASAPDVAKRGQHTAQVVASEGASSKPWQLTCGVGPAGTQKSRIEVWKPPLSSR
APNSRSTGSLYCAPGKATDTQCQHMKAAERGAILCKAKTVALPRAMGTHLLHQCNMDVSH
GDKGDHFGTLRFTDYPFGFQNFMGHLAPLFCPISSIWIRDFWNFELERDDLGYLVEEISK
WQSIQEKAEYKSLENLKPDDVIEKKRQKTFSGEKSKLAAEICLLQLQLWIKGANIQLRPL
LQQVQVPDFGGIHVVLGLQPSFLGRLSRYLKELGCYDVSFIFREHHKPSKFVVLADLWKY
HPDGLRDPEEFPGKSAGCPSEKKLPEEGSGSNICHFAIFAVLQPLLVIPRQTASGVDLQQ
TLTDLQLRVLTVRRKTNKQKGHLHQNPICTSPLSKTKEIWDYVKRPNLHLIGVPESDGEN
GTKLKNTLQDIIQENFPNLARQASIQIQEIQRIPQRYSSRRATPIHIVVRFTKVEMNEQK
LRAAREKGQVTHKGKPIRLTADLSAEILQARREWGPIFNILKEKNFQPSSSYPAKLSFIS
EGEIKSFTDKQMLRDFVTTRPALQELLKEALNMERNNW

>gi568815595r:146094414_146320927|GENSCAN_predicted_CDS_5|1737_bp
atggtgccctgcatcccagctgcttcagctccagatgtggctaaaaggggccaacataca
gctcaggttgttgcttcagagggtgcaagctccaagccttggcagcttacatgcggtgtt
gggcctgcaggcacacagaagtcaagaattgaggtttggaaacctccactgtcctccaga
gccccaaatagtagatccactggcagcttgtactgtgcccctggaaaagccacagacact
caatgccagcacatgaaagcagctgagagaggggctatactctgtaaagccaaaacggtg
gcactgcccagggccatgggaacccacctcttgcatcagtgtaacatggatgtgagccat
ggagacaaaggagatcattttggaactttaagatttactgactacccttttggatttcag
aattttatggggcatctagcccctttgttttgtccaatttcttccatttggatcagagat
ttttggaactttgaacttgagagagatgatttagggtatctggtggaagaaatttctaag
tggcaaagcattcaagagaaagcagagtataaaagtttggaaaatttgaaacctgatgat
gtgatagaaaaaaaaagacaaaaaacgttttctggggagaaatccaagctggctgcagaa
atttgcctgcttcagctccagctgtggataaaaggggccaatatacagctcaggccattg
cttcagcaggtgcaagtcccagactttggtggcatacatgtggtgctgggcctgcagcca
tctttcttgggaaggctttccagatatttaaaagaacttgggtgttatgatgtaagcttt
atctttagggagcaccacaagcccagtaaatttgtggttcttgctgacttgtggaagtac
caccctgatggtctaagagatccagaagaattccctggaaaatcagccgggtgcccctct
gagaagaaacttccagaggaaggatcaggcagcaacatctgccattttgcaatatttgct
gttctgcagcctctgctggtgatacctaggcaaacagcctctggagtggacctccagcaa
actctgacagacctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaa
ggacatctacaccaaaaccccatctgtacgtcaccattatcaaagaccaaagaaatatgg
gactatgtgaaaagaccaaatctacatctaattggtgtacctgaaagtgatggggagaat
ggaaccaagttgaaaaacactctgcaggatattatccaggagaacttccccaacctagca
aggcaggccagcattcaaattcaggaaatacagagaattccacaaagatactcctcgaga
agagcaactccaatacacatagttgtcagattcaccaaagttgaaatgaatgaacaaaag
ttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaaca
gcagatctctcggcagaaattctacaagccagaagagagtgggggccaatattcaacatt
cttaaagaaaagaattttcaacccagtagttcatatccagccaaattaagcttcataagt
gaaggagaaataaaatcctttacagacaaacaaatgctgagagattttgtcaccaccagg
cctgccttacaagagctcctgaaggaagcactaaacatggaaaggaacaactggtag