GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:21:31

Sequence gi568815575r:69061310_69263073 : 201764 bp : 49.12% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   2893   2888    6                               1.05
 1.08 Term -   2998   2896  103  0  1   24   53   127 0.013   0.55
 1.07 Intr -  20177  19869  309  1  0   60   63   206 0.065  10.73
 1.06 Intr -  22928  22825  104  2  2   61   80    29 0.054  -1.63
 1.05 Intr -  33703  33629   75  1  0   52   85    82 0.301   4.01
 1.04 Intr -  35144  35019  126  2  0   40   70    61 0.228   0.38
 1.03 Intr -  41748  41614  135  0  0  108   61     6 0.217   0.66
 1.02 Intr -  42895  42839   57  1  0  116   47    31 0.533   0.88
 1.01 Init -  44868  44737  132  0  0   72   87   111 0.760   7.56
 1.00 Prom -  59874  59835   40                              -5.16

 2.00 Prom +  61269  61308   40                              -7.46
 2.01 Init +  62568  62660   93  2  0   84   71    37 0.263   0.03
 2.02 Intr +  65883  65959   77  2  2  105   95    12 0.770   1.91
 2.03 Term +  67386  67896  511  0  1   90   55   215 0.466  12.25
 2.04 PlyA +  69258  69263    6                               1.05

 3.07 PlyA -  70366  70361    6                               1.05
 3.06 Term -  84590  84573   18  2  0   95   54    16 0.144  -2.78
 3.05 Intr -  88954  88862   93  1  0  102   89    23 0.478   3.96
 3.04 Intr -  89499  89474   26  1  2   76  105    18 0.425   0.04
 3.03 Intr - 101825 100069 1757  1  2  -12   14  1334 0.000 103.32
 3.02 Intr - 104190 104063  128  0  2  103   97   139 0.005  15.78
 3.01 Init - 118247 118209   39  2  0   65   99    31 0.212   2.09
 3.00 Prom - 118402 118363   40                              -4.06

 4.00 Prom + 124442 124481   40                              -3.76
 4.01 Init + 127646 127670   25  1  1   86   99    25 0.196   2.61
 4.02 Intr + 136246 136420  175  2  1   44   68    86 0.057   1.20
 4.03 Intr + 143023 143140  118  1  1   96   80    18 0.254   2.27
 4.04 Intr + 144984 145138  155  2  2   61   99    61 0.349   3.37
 4.05 Intr + 154123 154308  186  1  0   76   93    55 0.441   3.60
 4.06 Intr + 157945 158053  109  1  1  123    8    94 0.659   5.19
 4.07 Intr + 160212 160305   94  2  1  110   89    -5 0.510   1.34
 4.08 Intr + 175464 175601  138  1  0   96   58   112 0.643   9.44
 4.09 Term + 180101 180219  119  0  2   81   43    34 0.056  -3.10
 4.10 PlyA + 184146 184151    6                               1.05

 5.00 Prom + 184247 184286   40                              -4.96
 5.01 Sngl + 185638 186606  969  0  0   60   48   511 0.742  41.03
 5.02 PlyA + 187040 187045    6                               1.05

 6.00 Prom + 188535 188574   40                              -4.36
 6.01 Init + 188827 189118  292  0  1   71   50   115 0.680   3.31
 6.02 Term + 190127 190209   83  0  2  125   37    50 0.720   1.46
 6.03 PlyA + 190861 190866    6                               1.05

 7.02 PlyA - 195312 195307    6                               1.05
 7.01 Term - 198960 198813  148  2  1   81   42   101 0.367   2.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 101929  99998 1932  1  0   64   43  1311 0.954 118.12
S.002 Sngl + 104030 104239  210  1  0   53   41   234 0.875  10.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_1|346_aa
MGNFLPSLGFHFLIALWLAFLPEDWVRIPPGSACNRSDQSLESHGNSKRKGLQAYVPNYL
MGQEVEVTHAGPGVRGVWCIYRTVSHSADPIWSGTVRDEGQGEESGERAPEKPGGPGYCA
FSATWKEQLGLRTSGGLHPATGENETKKPQAHSVAFGKSYPVGDIHMFVVVALSLAYDCK
TVRQSVLQSWELAQREGNGTPRPNLEMISGQEPAPAFNELNGWEYGESYKGELWDAVRTY
TWGFFVLHERHRKGRSSRSQEASLGELQGQLGRAGAQTAAPAQTPGMGKAVVRAEVGRRL
PALDLDCSHSNGRTQLELEGAILEAESHPSPDTKSVGTLILDFSEL

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_1|1041_bp
atgggcaacttcctcccttctctgggcttccatttcctcattgccctatggttggccttc
ctccctgaggactgggttcggatcccaccagggtctgcttgcaacagaagtgatcagagc
ctagaatctcacggcaacagcaagaggaaaggcctgcaagcatatgtgcctaactaccta
atggggcaggaagtggaagtaacacatgcagggccaggggtgaggggcgtctggtgcatt
tatagaactgtgagtcattcagctgatccgatctggagtgggacagtcagggatgaaggc
caaggagaggagagtggggagagggcccctgaaaagcccggaggccctgggtactgtgcc
tttagtgccacgtggaaagaacagcttgggctcaggacttcaggtggtctccacccggcc
actggagagaatgagacaaaaaagccccaggcccactctgtggcctttggcaagtcctac
cctgttggggacatacacatgtttgtggtggtggccctgagtctggcctatgactgcaag
actgtgagacagtctgtcctccagagctgggagctggcacaacgtgagggcaatggcacc
ccaagacctaacttagagatgatatctggccaggagccagcccctgccttcaacgaactg
aatggctgggagtatggggagtcctacaaaggtgaactgtgggatgctgtcaggacttac
acgtggggattctttgtcctccacgaaaggcacaggaaaggccgatcaagcaggtcccag
gaggcttccctgggggagctgcagggacaactgggccgggctggcgcccagacagcagcg
cctgctcagactccggggatgggcaaggcagtggtgagggcggaggtggggaggcggctg
ccggccctggacctggactgctcccactccaatggaaggacacaactagaactagaaggt
gccatcttggaagcagagagtcacccctcaccagacaccaagtctgttggcaccttgatc
ctggacttttcagaactgtga

>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_2|226_aa
MQKGSWRCCPNILPASLSRLDLALALAQPRQGTTIRTQALSRHLDYLMGSWLLTHTSSER
LLKGLCSTPELLAVEAAAVVAAAAGRRWRAREAPPQGQAARHFALIAWSGRQVRSPAAPP
ALHAFFPAKKERGELTGSRCRSPLGLDPKYPKYQPGHRETWGRAGGMLGTPGLIEGLDPT
LKPPPVVLQGPEGKIWSLGPGLSSLLSLCLVLVLSCEAPQLFPHGR

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_2|681_bp
atgcagaagggaagctggaggtgctgcccaaacatcctgcctgcgagcctgtcccggctc
gatttggctctggccttagctcaaccacgccagggcacaactatcaggactcaagccctt
tccaggcacttagactacctcatgggctcctggcttctcactcacactagcagcgagcgc
ctgctgaaaggcctctgctccaccccggagctactggccgtggaggctgcggcggtggtg
gcggcggcggcggggcgaagatggagagcccgcgaagctcctccccaggggcaggctgcc
cgccactttgctttgatagcctggtccgggaggcaagtccgcagtcccgcagctcctccg
gcgctgcacgcattcttcccggccaagaaggaacgcggcgagctaacgggatccagatgt
aggagtcctctgggcttggaccccaaataccctaaataccagccaggccaccgggagacc
tggggacgtgcaggaggcatgctggggactcccggcctcatcgagggcctggaccccacc
ctcaagccccctccagttgtgctccaggggcctgagggcaagatctggagcctgggccca
ggcctctcctctctcttgagtctgtgcttggtcctggtgcttagctgcgaggctccccag
ctctttccccatgggagatga

>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_3|686_aa
MRNQAIRNQCERESPPAPLLSGGGGARDREQRLWRSWRSEIRELCFSEKRVAFWTWPPTS
QRERIASQRKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRY
PPREYRASGSRRGMAYGHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGAR
SLAGPPPHFSSFSRDVREERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDS
SERERREQNLPARPSRAPVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDD
DDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP
RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK
EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG
EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD
GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE
ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCPCRLLPAKVRGSRLFRRP
LPVPAGPATSSEPRPSAADQQVSRVK

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_3|2061_bp
atgcgtaatcaggcaattaggaaccagtgtgagcgggagtcgccgcccgccccgctgctg
tctggcgggggaggagctcgggaccgggagcagcggctctggcggtcgtggcggtcggag
atccgagagctctgcttctctgaaaagcgtgtggctttctggacttggccacccacgagc
cagcgggaaaggattgccagccagagaaagacgaactccgaagtcccaatgcacagatca
gcccccagtcaaaccaccaagaggagccgatcgccattttccactactcgtcgtagttgg
gacgacagcgagagttcgggaaccaacctgaatattgataatgaggactattccaggtat
ccgccaagagagtacagagcttcgggtagcagaagaggaatggcctatggacatattgac
tcttatggggcagatgatagtgaggaggagggggctgggcctgttgagcgaccgccagtg
agagggaaaactggcaagtttaaagatgataagctgtatgacccagagaaaggggcaagg
tctttggctgggccacctccacatttctctagttttagccgtgatgtgagagaggagcga
gacaagttagacccagtccctgcagcaagatgctcagctagcagagctgacttcctgcca
caaagtagtgtggcctcacagtcgtcttctgaaggcaagctggctacaaaaggtgacagc
tcggagagggagagaagggagcaaaatttacctgcacgtcccagcagggctcctgtgagt
atttgtggtggtggggaaaacacctcaaagagtgcagaggaacctgtggtcaggcccaaa
atcagaaacctggcaagtccaaactgcgtgaaaccaaaaattttttttgatactgatgat
gatgacgatatgccacacagtacttccaggtggagggataccgccaatgacaatgagggc
cactcggatggcctggcaagaagagggagaggcgagagttcaagtggctatcccgagcca
aagtaccctgaagacaaacgggaagcgaggagtgaccaagtgaaaccagaaaaggtgccg
agacgacgacgcaccatggccgaccctgacttctggacgcacagtgatgattactacaaa
tactgcgacgaagactctgacagtgacaaagagtggattgctgctctgcgtcggaaatat
cgaagccgagagcaaaccctgtcctccagtggcgaaagctgggagactctgccggggaaa
gaagagcgggaacctccacaggctaaggtgagtgccagcactggcaccagccctggcccc
ggtgctagtgccagtgccggggctggcgccggggccagtgctggcagcaatggcagcaat
taccttgaagaagttcgagaaccatctcttcaggaagagcaggcatccctggaagaagga
gaaattccttggctccagtaccatgagaatgacagtagcagtgagggggataatgattct
ggtcacgagttgatgcaacctggggtattcatgctggatggaaacaacaaccttgaagat
gactccagtgtgagcgaagacctagaagtggattggagcctctttgatggatttgcagat
gggttaggagtggctgaagccatttcctatgtggaccctcagttcctcacctacatggca
cttgaagaacgcctggcccaggcaatggaaactgcccttgcgcacttggagtctctcgca
gtggatgtagaggtggccaatccaccagcaagcaaggagagcattgacgctcttcccgag
atcctggtcactgaagatcatggcgcagttggtcaggagatgtgctgccccatctgctgt
agcgaatatgtgaagggggaggtggcaactgagctgccgtgccaccactatttccacaag
ccgtgcccctgccgcctgctccctgccaaggtcagagggtcaaggctcttccggcgcccc
ctccccgtgccggcagggcccgccacctcctcggagccccgcccctccgcggccgaccag
caggtctctcgcgtcaaatga

>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_4|372_aa
MRARERAGGPNLLLEKSPPSTRAPMDQLVPLQLSWWKSHPTSGPLPSLLIACVKKKLLVP
KRFQENRILDSLSDPEGTLIMPKSLEIYKGSCNWEESGLLGSCFSQESSKVADSGPLNVT
GPKPKMLRSQPKDPFYALGAGQQASKKPLCSHWLLTMSHPPPSLETGFSPDYLAPTMPPL
GSPIIDPNPDSLLLKPGRVGGHTEAMRKLVLSRPLGTSYWTVAVPGLGQGVTRRILAKVR
KAILASQKQLLCLHLGVSRSKALPAPPPRAGRAPYLLGAPPLRGRPAGSPRRNLLQSFGE
HRMVGTSACLWMTKPLDLQELIAGVAAAPSPLPALLPVPTSHTIPLKKGKQETCLCYCHE
LWRIVSGKCFLT

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_4|1119_bp
atgagggccagagaacgagcaggagggccgaacctactgctggagaagtccccgccttcc
acccgagcacccatggatcagctggtgcccctacagctatcctggtggaagagccacccc
acttctggcccacttccttctcttttaatagcatgtgtgaagaagaagctgttggtgcca
aaaagattccaagaaaatagaatcctagactcactgtctgatccggaaggcactttaatc
atgcctaagagcctggagatttataaaggaagctgtaactgggaagaatccggcctgctg
ggaagctgcttctcccaggaatcctccaaggttgcagactcagggccactgaatgtcact
ggcccaaagcccaagatgctgaggtctcaaccaaaggacccattttatgcactgggggca
ggacagcaagccagcaagaagcccctgtgttctcactggcttcttaccatgagccaccca
cctccatccctggagactggcttctccccggattacctggcacccactatgccccctctt
ggcagtcccatcattgaccccaacccagactctctcctactcaagccaggaagagtggga
gggcacacagaggccatgaggaaactcgtgctgagccggcccttggggacctcatactgg
acagtggccgtcccgggcttgggccaaggggttactaggaggatcctggccaaagtccgg
aaagccatccttgcaagccagaagcagctgctctgcctgcatttgggggtcagcaggtcc
aaggctcttccggcgccccctccccgtgccggcagggccccctacctcctcggagccccg
cccctccgcggccgacccgcaggcagtcctcgaaggaacctcctccagtcctttggagaa
cacaggatggttggcaccagtgcctgcctgtggatgactaaaccattagacctgcaggaa
ctcattgctggtgtggcagcagccccttctccactgcctgccctactgccagtgcccacc
agccatacaattcctctgaagaaaggcaagcaggagacttgcctttgctactgccacgag
ctctggagaattgtatctggtaaatgtttcttaacctag

>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_5|322_aa
MSKNQHKKAENSKNQNASSLPKDHNSSPAREQNWMENEFDKLTKVGFRKWVIANSSELTE
HVLTQCKEAKNLDKRLEELLTRISSLEKNINDRMELKNIARELHEAYTSINSQINQAEER
LSKIEDQLNEIKHEDRIREKRMKRNEQSFQEIWDYVKRPNLHLIGVPESDRENGNNLENT
FQDIIQENFPNLATQANIQIQETQRTPQRYSSRRGNPTAWKLNNLLLNDYWVNNEIKIEI
NKFFETNENKETMYQNLWDTAKAVFRGKFVALNAHKRQQERSKINTLTSQLKELEKQMQT
NSKASRRQEITNIRAELKDMGI

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_5|969_bp
atgagtaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctctt
ccaaaggatcacaactcctcaccagcaagagaacaaaactggatggagaatgaatttgac
aaattgacaaaagtaggcttcagaaagtgggtaatagcaaactcctctgagctaacggag
catgttctaacccaatgcaaggaagctaagaaccttgataaaaggttggaggaattgcta
actagaataagcagtttagagaagaacataaatgaccggatggagctgaaaaacatagca
cgagaacttcatgaagcatatacaagcatcaacagccaaatcaatcaagcggaagaaagg
ttatcaaagattgaagatcaacttaatgaaataaagcatgaagacaggattagagaaaaa
agaatgaaaaggaacgaacaaagcttccaagaaatatgggattatgtgaaaagaccaaac
ctacatttgattggtgtacctgaaagtgacagggagaatggaaataacttggaaaacaca
tttcaggatattattcaggagaacttccccaacctagcaacacaggccaacattcaaatt
caggaaacacagagaacaccgcaaagatactcctcaagaagaggaaatccaactgcatgg
aaactgaacaacctgctcctgaatgactactgggtaaataatgaaattaagatagaaata
aataagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggacacg
gctaaagcagtgtttagaggaaaatttgtagcactaaatgcccacaagagacagcaggaa
agatctaaaatcaacaccctaacatcacaattaaaagaactagagaagcaaatgcaaaca
aattcaaaagctagcagaagacaagaaataactaatatcagagcagaactgaaggacatg
gggatatga

>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_6|124_aa
MGKDFMTKTPKAIATKARIDKCDLIKLKSFCTAKETIFRMNRQPTEWEKIFAIYPSDKGL
ISSIYKELKQIYKKKTKQNNPIKKWAKDMNRHLQKKTSSLNGYICAAHSGGHKLHMGIKH
LKCD

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_6|375_bp
atgggcaaagacttcatgactaaaacaccaaaagcaattgcaacaaaagccagaattgac
aaatgtgatctaattaaactaaagagcttctgcacagcaaaagaaactatcttcagaatg
aacaggcaacctacagaatgggagaaaatttttgcaatctacccatctgacaaagggcta
atatccagcatctacaaggaacttaaacaaatttacaagaaaaaaacaaaacaaaacaac
cctatcaaaaagtgggcgaaggatatgaacagacaccttcaaaagaagacatcttctctg
aatggctacatttgtgctgcccattctggtgggcacaagctgcacatgggtattaagcac
ttgaaatgtgactag

>gi568815575r:69061310_69263073|GENSCAN_predicted_peptide_7|49_aa
XLCTPMIFVTSMQTETVGGQCGALDDQGMSNGSSLPGEEGFLQKLWGEG

>gi568815575r:69061310_69263073|GENSCAN_predicted_CDS_7|150_bp
nncctctgcacgccaatgatttttgtgacctccatgcagactgagactgttggaggacag
tgtggagccctggatgatcaaggcatgtcaaatggcagcagcctgccaggagaggaaggt
ttcctgcagaagctatggggagagggttag