GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:03:40

Sequence gi568815576r:31183087_31392344 : 209258 bp : 47.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4009   4184  176  0  2   72   65   153 0.791  10.32
 1.02 Intr +   9919  10054  136  1  1   49   77    23 0.028  -2.13
 1.03 Intr +  12383  12495  113  1  2  100   94    38 0.201   4.78
 1.04 Intr +  18245  18296   52  2  1   33   97    12 0.065  -4.49
 1.05 Intr +  18412  18529  118  0  1  119  110    61 0.992  11.44
 1.06 Term +  21403  21500   98  2  2  124   38   141 0.932  10.83
 1.07 PlyA +  21614  21619    6                              -8.16

 2.05 PlyA -  21638  21633    6                              -4.04
 2.04 Term -  21790  21641  150  1  0  131   45   126 0.194  10.51
 2.03 Intr -  22332  22236   97  2  1   38   76    47 0.102  -1.49
 2.02 Intr -  29223  29000  224  0  2  100  107    71 0.536   7.13
 2.01 Init -  31912  31910    3  1  0   93   95     0 0.549   1.20
 2.00 Prom -  37299  37260   40                              -2.16

 3.00 Prom +  54716  54755   40                              -3.36
 3.01 Init +  65552  65683  132  1  0   71  109    77 0.634   8.26
 3.02 Intr +  70108  70220  113  0  2   80   70     6 0.330  -2.82
 3.03 Intr +  75205  75340  136  1  1   94  101   159 0.958  18.37
 3.04 Intr +  76035  76144  110  2  2  111   99    89 0.999  11.38
 3.05 Intr +  76803  76991  189  0  0   76   89   245 0.999  22.10
 3.06 Intr +  79048  79153  106  1  1   71   65   227 0.999  18.92
 3.07 Intr +  79509  79705  197  2  2   81   45   155 0.999   8.71
 3.08 Intr +  82860  83046  187  0  1   96  105   153 0.972  17.49
 3.09 Intr +  83898  83984   87  2  0   82   94   109 0.999  11.07
 3.10 Intr +  84690  84821  132  2  0   96   89   224 0.999  24.14
 3.11 Intr +  85058  85114   57  1  0   92  101    33 0.904   4.08
 3.12 Intr +  88050  88115   66  2  0   89   76    89 0.794   6.90
 3.13 Intr +  89444  89618  175  1  1  100  113   334 0.999  36.61
 3.14 Intr +  90366  90421   56  1  2   77   83    36 0.997   0.70
 3.15 Intr +  92065  92222  158  0  2   82   77   207 0.893  17.81
 3.16 Intr +  93703  94050  348  1  0   29   53   636 0.571  48.67
 3.17 Term +  95211  95355  145  0  1  131   41   196 0.942  16.58
 3.18 PlyA +  96619  96624    6                               1.05

 4.07 PlyA -  99110  99105    6                               1.05
 4.06 Term - 100202  99998  205  1  1   90   52   197 0.998  13.14
 4.05 Intr - 106307 106229   79  0  1   93   78   151 0.981  13.21
 4.04 Intr - 106613 106413  201  0  0   71   51   233 0.989  17.16
 4.03 Intr - 107998 107879  120  2  0  110   82   199 0.999  21.97
 4.02 Intr - 108210 108094  117  1  0   94  114   142 0.999  17.84
 4.01 Init - 109258 109189   70  1  1   74   78    71 0.913   6.08
 4.00 Prom - 125529 125490   40                              -3.76

 5.00 Prom + 131197 131236   40                              -6.86
 5.01 Init + 134534 134600   67  1  1   74   62   107 0.886   7.93
 5.02 Term + 138463 138590  128  2  2   22   53   115 0.584  -0.16
 5.03 PlyA + 139369 139374    6                               1.05

 6.05 PlyA - 139690 139685    6                               1.05
 6.04 Term - 144223 143805  419  2  2  100   54   386 0.943  31.84
 6.03 Intr - 152777 152606  172  2  1  105   74   167 0.703  16.52
 6.02 Intr - 159874 159811   64  0  1  108   91    35 0.812   4.52
 6.01 Init - 162516 161246 1271  0  2  111   94  1499 0.987 144.58
 6.00 Prom - 181304 181265   40                              -0.96

 7.02 PlyA - 183338 183333    6                               1.05
 7.01 Sngl - 202505 202140  366  2  0   76   41   169 0.976   7.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_1|230_aa
MASKGPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCA
SYHINSPPALKGYENIRKGKIFLVSTKSFCEERKVYFPSFSTYLWLETRPNRQVCPVCKA
GISRDKVIPLYGRGSTGQQDPRVYMGGKAVPHLRNMWHKGFQGFGFGDGGFQMSFGIGAF
PFGIFATAFNINDGRPPPAVPGTPQYVDEQFLSRLFLFVALVIMFWLLIA

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_1|693_bp
atggcaagcaaggggccctcggcctctgcatctcctgagaactccagtgcaggggggccc
agtgggagcagcaatggcgctggcgagagcggagggcaggacagcactttcgagtgcaac
atctgcttggacacagccaaggatgccgtcatcagcctgtgtggccacctcttctgtgcc
tcctatcatatcaacagtcccccagcccttaaaggttatgaaaatattaggaaggggaaa
atttttttggtgtcaacaaagagcttttgtgaggagagaaaagtctattttcctagcttt
agcacctacttgtggttggagaccagacctaacagacaggtgtgtcctgtttgcaaagct
ggcatcagccgagacaaggtcatccccctctatggaaggggcagcactgggcaacaggac
cccagggtatatatgggaggaaaagctgtcccccaccttcgaaacatgtggcacaaggga
tttcaaggatttggatttggagatggtggcttccagatgtcttttggaattggggcattt
ccctttgggatatttgccacagcatttaatataaatgatgggcggcctcctccagctgtc
cctgggacaccccagtatgtggacgagcagttcctgtcacgcctcttcctatttgtggcc
ctggtgatcatgttctggctcctgattgcctaa

>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_2|157_aa
MAREDHSPRRERDAPPTAPWEDQTTPGTGDCPPTPRPAALRPRSRDAAPPPGSGSGSAAA
LAPPSASGVPSRCSRRSQSQLRQYSRLYVLWQREADEHSFREKADGKPSQDLQNWLKQDF
MVSPMRDDSMPRPEVIECLQRWRYSGVIANWSRVPKL

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_2|474_bp
atggcgcgggaagaccacagccccaggcgcgaacgggatgcaccgcctacggcgccctgg
gaggaccaaaccacacctggcacaggggactgcccgccgacgccccgccccgccgctctc
aggcctcgctcccgagacgcggccccgccccctggctctggctcgggctctgcagcggcc
ctggcgccccctagtgcgagcggcgtcccctcgaggtgctcccgccgtagtcagtctcag
cttcggcagtattctcggctgtatgttctctggcagagagaggcagatgaacatagtttt
agggagaaagctgatgggaaacctagtcaggacctgcagaactggctgaaacaagatttc
atggtgtcacccatgagagatgactcaatgccaaggcctgaagttatagagtgtttacag
cggtggcgatattcaggggtcatcgccaactggtctcgagttccaaagctctga

>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_3|797_aa
MVAIYSRPEAVTDGFAAEPVYLVWEEDGELLVSPGLLHLQRPVSDSGMTGSDLSFTTSQL
GTLLPTARADFDFHLKLPKIERCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSL
LMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERL
STESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNA
IHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHM
QNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRC
SSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEV
KVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIAS
GMAYLHSMCIIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKRAPMEKATTKKRTLRK
NDRKKRYTVVGNPYWMAPEMLNGKSYDETVDIFSFGIVLCEIIGQVYADPDCLPRTLDFG
LNVKLFWEKFVPTDCPPAFFPLAAICCRLEPESRAPPGAAGEGPGCADDEGPVRRQGKVT
IKYDPKELRKHLNLEEWILEQLTRLYDCQEEEISELEIDVDELLDMESDDAWASRVKELL
VDCYKPTEAFISGLLDKIRAMQKLSTPQKKPAFSKLEDSFEALSLYLGELGIPLPAELEE
LDHTVSMQYGLTRDSPP

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_3|2394_bp
atggtggccatctacagccggcctgaggcagtcacagacggatttgcagctgagcctgtc
tatctggtgtgggaagaagatggggagttacttgtcagtcccggcttacttcacctccag
agacctgtttcggacagtgggatgactggttcagacctcagctttaccacctcccagctg
ggtactcttctacctacagccagggcagattttgactttcacttgaaacttccaaaaatt
gaaaggtgttcagaatgccaggattccctcaccaactggtactatgagaaggatgggaag
ctctactgccccaaggactactgggggaagtttggggagttctgtcatgggtgctccctg
ctgatgacagggccttttatggtggctggggagttcaagtaccacccagagtgctttgcc
tgtatgagctgcaaggtgatcattgaggatggggatgcatatgcactggtgcagcatgcc
accctctactgtgggaagtgccacaatgaggtggtgctggcacccatgtttgagagactc
tccacagagtctgttcaggagcagctgccctactctgtcacgctcatctccatgccggcc
accactgaaggcaggcggggcttctccgtgtccgtggagagtgcctgctccaactacgcc
accactgtgcaagtgaaagaggtcaaccggatgcacatcagtcccaacaatcgaaacgcc
atccaccctggggaccgcatcctggagatcaatgggacccccgtccgcacacttcgagtg
gaggaggtggaggatgcaattagccagacgagccagacacttcagctgttgattgaacat
gaccccgtctcccaacgcctggaccagctgcggctggaggcccggctcgctcctcacatg
cagaatgccggacacccccacgccctcagcaccctggacaccaaggagaatctggagggg
acactgaggagacgttccctaaggcgcagtaacagtatctccaagtcccctggccccagc
tccccaaaggagcccctgctgttcagccgtgacatcagccgctcagaatcccttcgttgt
tccagcagctattcacagcagatcttccggccctgtgacctaatccatggggaggtcctg
gggaagggcttctttgggcaggctatcaaggtgacacacaaagccacgggcaaagtgatg
gtcatgaaagagttaattcgatgtgatgaggagacccagaaaacttttctgactgaggtg
aaagtgatgcgcagcctggaccaccccaatgtgctcaagttcattggtgtgctgtacaag
gataagaagctgaacctcctgacagagtacattgaggggggcacactgaaggactttctg
cgcagtatggatccgttcccctggcagcagaaggtcaggtttgccaaaggaatcgcctcc
ggaatggcctatttgcactctatgtgcatcatccaccgggatctgaactcgcacaactgc
ctcatcaagttggacaagactgtggtggtggcagactttgggctgtcacggctcatagtg
gaagagaggaaaagggcccccatggagaaggccaccaccaagaaacgcaccttgcgcaag
aacgaccgcaagaagcgctacacggtggtgggaaacccctactggatggcccctgagatg
ctgaacggaaagagctatgatgagacggtggatatcttctcctttgggatcgttctctgt
gagatcattgggcaggtgtatgcagatcctgactgccttccccgaacactggactttggc
ctcaacgtgaagcttttctgggagaagtttgttcccacagattgtcccccggccttcttc
ccgctggccgccatctgctgcagactggagcctgagagcagagccccccccggggccgca
ggagagggcccgggctgcgcggatgatgagggcccagtgaggcgccaagggaaggtcacc
atcaagtatgaccccaaggagctacggaagcacctcaacctagaggagtggatcctggag
cagctcacgcgcctctacgactgccaggaagaggagatctcagaactagagattgacgtg
gatgagctcctggacatggagagtgacgatgcctgggcttccagggtcaaggagctgctg
gttgactgttacaaacccacagaggccttcatctctggcctgctggacaagatccgggcc
atgcagaagctgagcacaccccagaagaaaccagcattctcgaaattggaggactccttt
gaggccctctccctgtacctgggggagctgggcatcccgctgcctgcagagctggaggag
ttggaccacactgtgagcatgcagtacggcctgacccgggactcacctccctag

>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_4|263_aa
MLLAWVQAFLVSNMLLAEAYGSGGCFWDNGHLYREDQTSPAPGLRCLNWLDAQSGLASAP
VSGAGNHSYCRNPDEDPRGPWCYVSGEAGVPEKRPCEDLRCPETTSQALPAFTTEIQEAS
EGPGADEVQVFAPANALPARSEAAAVQPVIGISQRVRMNSKEKKDLGTLGYVLGITMMVI
IIAIGAGIILGYSYKRGKDLKEQHDQKVCEREMQRITLPLSAFTNPTCEIVDEKTVVVHT
SQTPVDPQEGTTPLMGQAGTPGA

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_4|792_bp
atgctgttggcctgggtacaagcattcctcgtcagcaacatgctcctagcagaagcctat
ggatctggaggctgtttctgggacaacggccacctgtaccgggaggaccagacctccccc
gcgccgggcctccgctgcctcaactggctggacgcgcagagcgggctggcctcggccccc
gtgtcgggggccggcaatcacagttactgccgaaacccggacgaggacccgcgcgggccc
tggtgctacgtcagtggcgaggccggcgtccctgagaaacggccttgcgaggacctgcgc
tgtccagagaccacctcccaggccctgccagccttcacgacagaaatccaggaagcgtct
gaagggccaggtgcagatgaggtgcaggtgttcgctcctgccaacgccctgcccgctcgg
agtgaggcggcagctgtgcagccagtgattgggatcagccagcgggtgcggatgaactcc
aaggagaaaaaggacctgggaactctgggctacgtgctgggcattaccatgatggtgatc
atcattgccatcggagctggcatcatcttgggctactcctacaagagggggaaggatttg
aaagaacagcatgatcagaaagtatgtgagagggagatgcagcgaatcactctgcccttg
tctgccttcaccaaccccacctgtgagattgtggatgagaagactgtcgtggtccacacc
agccagactccagttgaccctcaggagggcaccaccccccttatgggccaggccgggact
cctggggcctga

>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_5|64_aa
MAKIQTTNADKDVEQQELSFIAAFSSSFYSLKGPFVSLGDMKRFVTSNVSCYLDLKGKFA
HVRL

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_5|195_bp
atggccaaaatccagacaacaaatgctgacaaggatgtggagcaacaggaactttcattc
attgctgcattttccagcagcttctacagtctgaaagggccctttgtctcccttggtgac
atgaagaggtttgtcacttcaaatgtcagctgttacttggacttgaagggcaagtttgcc
catgtccgcctgtga

>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_6|641_aa
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA
ACSEYFESVFSAQLGDGGAADGGPADVGGATAAPGGGAGGSRELEMHTISSKVFGDILDF
AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT
SDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAG
PLSPQLLTSPFPSVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKV
FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC
GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK
GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA
YMADHLKKHSEGPSNFCSICNREGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSF
SCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSP
FSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEGK

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_6|1926_bp
atggagcgggtgaacgacgcttcgtgcggcccgtctggctgctacacataccaggtgagc
agacacagcacggagatgctgcacaacctgaaccagcagcgcaaaaacggcgggcgcttc
tgcgacgtgctcttgcgggtaggcgacgagagcttcccagcgcaccgcgccgtgctggcc
gcctgcagcgagtactttgagtcggtgttcagcgcccagttgggcgacggcggagctgcg
gacgggggtccggctgatgtagggggcgcgacggcagcaccaggcggcggggccgggggc
agccgggagctggagatgcacactatcagctccaaggtatttggggacattctggacttc
gcctacacttcccgcatcgtggtgcgcttggagagctttcccgaactcatgacggccgcc
aagttcctgctgatgaggtcggttatcgagatctgccaggaagtcatcaaacagtccaac
gtacagatcctggtaccccctgcccgcgccgatataatgctctttcgcccccctgggacc
tcggacttgggcttccctttggacatgaccaacggggcagccttggcagccaacagcaat
ggcatcgccggcagcatgcagccagaggaggaggcagctcgggcggctggtgcagccatt
gcaggccaagcctctttgcctgtgttacctggggtggaccgcttgcccatggtggctgga
cccctatccccccaactgctgacttccccattccccagtgtggcatccagtgcccctccc
ctgactggcaagcgaggccggggccgcccaaggaaggccaacctgctggactcaatgttt
gggtccccagggggcctgagggaggcaggcatccttccatgcggtctatgtggtaaggtg
ttcactgatgccaaccggctccggcagcacgaggcccagcacggtgtcaccagcctccag
ctgggctacatcgaccttcctcctccgaggctgggtgagaatgggctacccatctctgaa
gaccccgacggcccccgaaagaggagccggaccaggaagcaggtggcttgtgagatctgc
ggcaagatcttccgtgatgtgtatcatcttaaccggcacaagctgtcccactctggggag
aagccctactcctgccctgtgtgtgggttgcggttcaagagaaaagaccgcatgtcctac
catgtgcggtcccatgatgggtccgtgggcaagccttacatctgccagagctgtgggaaa
ggcttctccaggcctgatcacttgaacggacatatcaagcaggtgcacacttctgagcgg
cctcacaagtgtcagacctgcaatgcttcttttgccacccgagaccgtctgcgctcccac
ctggcctgtcatgaagacaaggtgccctgccaggtgtgtgggaagtacttgcgggcagca
tacatggcagaccacctgaagaagcacagcgaggggcccagcaacttctgcagtatctgt
aaccgagaaggccagaaatgctcacatcaggatccgattgagagctctgactcctatggt
gacctctcagatgccagcgacctgaagacgccagagaagcagagtgccaatggctctttc
tcctgcgacatggcagtccccaaaaacaaaatggagtctgatggggagaagaagtaccca
tgccctgaatgtgggagcttcttccgctctaagtcctacttgaacaaacacatccagaag
gtgcatgtccgggctctcgggggccccctgggggacctgggccctgcccttggctcacct
ttctctcctcagcagaacatgtctctcctcgagtcctttgggtttcagattgttcagtcg
gcatttgcgtcatctttagtagatcctgaggttgaccagcagcccatggggcctgaaggg
aaatga

>gi568815576r:31183087_31392344|GENSCAN_predicted_peptide_7|121_aa
MDTFLDTYTFPKLKQEEIDSLNRTIMSSKMKSVINSLLTKKSPGPDEVTAEFHQMYKDGI
VLFLLKLFQKIEAEGLLPNSFCEPGIILTLKPGRDTPKIENFKPISLMNIDAEILNKILA
N

>gi568815576r:31183087_31392344|GENSCAN_predicted_CDS_7|366_bp
atggatacattcctggacacatacaccttcccaaaactgaaacaagaagaaatagattcc
ctgaacagaacaataatgagctccaaaatgaaatcagtaataaatagcctactaacaaag
aaaagcccaggaccagatgaagtcacagccgaattccaccagatgtacaaagacgggata
gtactatttcttctgaaactatttcaaaaaattgaggcagagggactcctccccaactca
ttctgtgagcccggcatcatcctgacactaaaacctggcagagacacacccaaaatagaa
aacttcaagccaatatccttgatgaacatcgatgcagaaatcctcaacaaaatacttgca
aattga