GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:50:42

Sequence gi568815590f:116838244_117042698 : 204455 bp : 38.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    483    754  272  1  2   89   47   177 0.924   8.36
 1.02 PlyA +    812    817    6                               1.05

 2.13 PlyA -   4462   4457    6                               1.05
 2.12 Term -   9448   9257  192  1  0   76   49   256 0.775  16.94
 2.11 Intr -  10786  10703   84  1  0   52   72    76 0.721   1.50
 2.10 Intr -  12524  12375  150  2  0   32   82   210 0.713  14.24
 2.09 Intr -  13853  13705  149  0  2   49   95   177 0.985  13.53
 2.08 Intr -  14465  14306  160  2  1   88   22   195 0.982  11.54
 2.07 Intr -  16225  16002  224  2  2   74   85   185 0.987  13.72
 2.06 Intr -  18045  17923  123  1  0  120  107   170 0.999  21.74
 2.05 Intr -  18528  18403  126  1  0   90   82   102 0.906   9.53
 2.04 Intr -  19230  19024  207  1  0   39   77   194 0.232  11.53
 2.03 Intr -  25016  24887  130  2  1   51   72   104 0.396   4.45
 2.02 Intr -  28498  28343  156  1  0   75   95    77 0.475   6.39
 2.01 Init -  35956  35876   81  1  0   83   49   158 0.509  10.42
 2.00 Prom -  37507  37468   40                              -9.35

 3.03 PlyA -  38397  38392    6                               1.05
 3.02 Term -  39426  39172  255  0  0   87   48   144 0.849   4.90
 3.01 Init -  47155  47090   66  1  0   90   72    64 0.593   6.12
 3.00 Prom -  51301  51262   40                              -7.35

 4.00 Prom +  58522  58561   40                              -4.15
 4.01 Sngl +  60206  61384 1179  1  0   60   45   702 0.922  58.82
 4.02 PlyA +  62443  62448    6                               1.05

 5.03 PlyA -  62992  62987    6                               1.05
 5.02 Term -  74781  74363  419  1  2    9   42   265 0.175   8.45
 5.01 Init -  85834  85777   58  1  1   68   64    17 0.099  -3.17
 5.00 Prom -  86167  86128   40                              -1.85

 6.00 Prom +  99135  99174   40                              -6.25
 6.01 Init + 100001 100210  210  1  0   88    3   222 0.140  12.58
 6.02 Term + 104315 104458  144  1  0  111   43   157 0.702  10.43
 6.03 PlyA + 105734 105739    6                               1.05

 7.04 PlyA - 106507 106502    6                               1.05
 7.03 Term - 108056 107857  200  0  2    4   32   215 0.971   4.08
 7.02 Intr - 108321 108142  180  1  0   44   80   100 0.906   3.72
 7.01 Init - 112042 111883  160  1  1   78   48   245 0.801  17.59
 7.00 Prom - 118883 118844   40                              -6.25

 8.00 Prom + 121309 121348   40                              -5.95
 8.01 Init + 135174 135577  404  2  2   60   27   208 0.126   8.05
 8.02 Intr + 150078 150187  110  0  2   13   76    74 0.068  -2.29
 8.03 Term + 154664 154770  107  0  2   70   53   104 0.268   2.69
 8.04 PlyA + 155422 155427    6                               1.05

 9.00 Prom + 158543 158582   40                              -4.75
 9.01 Init + 162007 162133  127  0  1   88   80    98 0.386   9.37
 9.02 Intr + 175342 175478  137  2  2   54   57    78 0.351   0.67
 9.03 Intr + 187745 187916  172  1  1  111   50    96 0.178   6.69
 9.04 Term + 197203 197378  176  2  2   57   55   180 0.660   8.54
 9.05 PlyA + 199435 199440    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_1|90_aa
XRPYFSALCGGKQLSKLVHPLNHHPYCPFKPELCLPLSFPNSWASFKAQYLSLRPEMFPD
SPIRVPNTCCIAQSGIYKIVSIAFLFICVS

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_1|273_bp
naaaggccctatttttctgcactctgtggagggaaacagctcagcaagcttgttcacccc
ctgaaccatcacccatactgtccctttaaaccagaactctgcttgccactctcctttcct
aactcttgggcatccttcaaggctcagtatttgtcacttcgtccagaaatgtttcctgac
tccccaatccgagtccctaatacctgctgcatagcccaatccggcatctataaaattgtt
tcaattgcattcttattcatctgtgtctcctaa

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_2|593_aa
MAVWEEAVAGPAPAVPAPGAATFRRTRPARTMFYAHFVLSKRGPLAKIWLAAHWDKKLTK
AHVFECNLESSVESIISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADCNEAFIKIKMAF
RPGDFGMDDREIMREGSAFEDDDMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDD
NFGEGNDGGILDDKLISNNDGGIFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMGGPDSP
DSVDPVEPMPTMTDQTTLVPNEEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIR
AQLSDYSDIVTTLDLAPPTKKLMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVP
EDLRKRRKGGEADNLDEFLKEFENPEVPREDQQQQHQQRDVIDEPIIEEPSRLQESVMEA
SRTNIDESAMPPPPPQGVKRKAGQIDPEPVMPPQQVEQMEIPPVELPPEEPPNICQLIPE
LELLPEKEKEKEKEKEDDEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAES
ISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_2|1782_bp
atggctgtctgggaggaggcggtggcgggcccggcgcccgcggtgccagccccgggagca
gcaaccttccgccgaactcggccagccagaacaatgttctacgcacattttgttctcagt
aaaagagggcctctggccaaaatttggctagcggcccattgggataagaagctaaccaaa
gcccatgtgttcgagtgtaatttagagagcagcgtggagagtatcatctcaccaaaggtg
aaaatggcattacggacatcaggacatctcttactgggagtagttcgaatctatcacagg
aaagccaaataccttcttgcagactgtaatgaagcattcattaagataaagatggctttt
cggccaggtgattttggaatggatgatcgtgagataatgagagaaggcagtgcttttgag
gatgacgacatgttagtaagcactactacttctaacctcctattagagtctgaacagagc
accagcaatctgaatgagaaaattaaccatttagaatatgaagatcaatataaggatgat
aattttggagaaggaaatgatggtggaatattagatgacaaacttattagtaataatgat
ggcggtatctttgatgatccccctgccctctctgaggcaggggtgatgttgccagagcag
cctgcacatgacgatatggatgaggatgataatgtatcaatgggtgggcctgatagtcct
gattcagtggatcccgttgaaccaatgccaaccatgactgatcaaacaacacttgttcca
aatgaggaagaagcatttgcattggagcctattgatataactgttaaagaaacaaaagcc
aagaggaagaggaagctaattgttgacagtgtcaaagagttggatagcaagacaattaga
gcccaacttagtgattattcagatattgttactactttggatctggcaccgcccaccaag
aaattgatgatgtggaaagagacaggaggagtagaaaaactgttttctttacctgctcag
cctttgtggaataacagactactgaagctctttacacgctgtcttacaccgcttgtacca
gaagaccttagaaaaaggaggaaaggaggagaggcagataatttggatgaattcctcaaa
gaatttgaaaatccagaggttcctagagaggaccagcaacagcagcatcagcagcgtgat
gttatcgatgagcccattattgaagagccaagccgcctccaggagtcagtgatggaggcc
agcagaacaaacatagatgagtcagctatgcctccaccaccacctcagggagttaagcga
aaagctggacaaattgacccagagcctgtgatgcctcctcagcaggtagagcagatggaa
ataccacctgtagagcttcccccagaagaacctccaaatatctgtcagctaataccagag
ttagaacttctgccagaaaaagagaaggagaaagagaaggaaaaagaagatgatgaagag
gaagaggatgaagatgcatcagggggcgatcaagatcaggaagaaagaagatggaacaaa
aggactcagcagatgcttcatggtcttcagcgtgctcttgctaaaactggagctgaatct
atcagtttgcttgagttatgtcgaaatacgaacagaaaacaagctgccgcaaagttctac
agcttcttggttcttaaaaagcagcaagctattgagctgacacaggaagaaccgtacagt
gacatcatcgcaacacctggaccaaggttccatattatataa

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_3|106_aa
MAEGDGEAGTSYVAGAGGREQRLGILTTILNANFLKSPLKTNQKNIKYLANYNRNSLDKA
LSCGQYGHLANGLQPVRRTLPQPKNSGPTVSGAQDCPLSYPSPISA

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_3|321_bp
atggcggaaggtgatggggaagcaggcacatcttacgtggctggagcaggaggaagagag
caaaggcttgggattttaacaactatccttaatgccaatttcttaaagtctccattaaaa
acaaaccaaaagaacataaaatatttggctaactacaacagaaattcacttgataaagct
ttgagctgtggccagtatggccacttagctaatggactccagccagtgagacgaaccttg
ccccaacccaaaaacagtggacccacagtgagtggagcacaagactgtccactttcttat
ccatctcctatatcagcataa

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_4|392_aa
MWKRLRNWVTSRGWNSLEGSEKDRKMWESLELPRDLLNGFDENADSDTKNKVQAEVVSDG
DEELVGNWSQGDSCYVLAKRLAGFCPCPKDLWNFELEKDDLGYLAEKMSKQQSIQDVTWA
LLKAFSFERETEHRSLENFQPDNVIEKKNPFSGEKFKPATEICISSKEPNANPQDHGENV
SRSCHRPSWQPLPSQAQKPRRKKCFCGLGPGLPSCVQPRDLVPCVSAALVMAERGQCTAW
AVGSEGGSPKPWQPPHDVEPVGAEKSRIEVWEPLPRFQKMYGNVWMPRQKFAAGAGPSWR
TSARSVWKGNVGLGSSHRVPTGALTSGAVGRGPPSSRSQNGRSTDSMHHAPGKATDTRRH
PMKAARREAVPCKATGVELPKTTGTHFLHQLD

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_4|1179_bp
atgtggaagcgacttaggaactgggtaacaagcagaggttggaacagtttggagggctca
gaaaaagacaggaaaatgtgggaaagtttggaacttcctagagacttgctgaatggtttt
gatgaaaatgctgatagtgacacgaaaaataaggtccaggctgaggttgtctcagatgga
gatgaggaacttgttgggaactggagccaaggtgactcctgttatgttttagcaaagaga
ctggcagggttttgcccctgccctaaagatttgtggaactttgaacttgagaaagatgat
ttagggtatctggcggaaaaaatgtctaagcagcaaagcattcaagatgtgacttgggcg
ctgttaaaagcattcagttttgaaagggaaacagagcatagaagtttggaaaatttccag
cctgacaatgtgatagaaaagaaaaacccattttctggagagaaattcaagccagctaca
gaaatttgcataagtagcaaggagcctaatgctaatccccaagaccatggggaaaacgtc
tccaggtcatgtcacagaccttcatggcagcctctcccatcacaggcccagaagcctagg
agaaagaagtgtttttgtgggctgggcccagggctgccaagctgtgtgcagcctagagac
ttggtgccctgtgtctccgctgctctagtcatggctgaaagaggccaatgtacagcttgg
gctgtgggttcagagggtggaagtcccaagccttggcagcctccacatgatgttgagcct
gtgggtgcagagaagtcaagaattgaggtttgggaacctctgcctagatttcagaagatg
tatggaaatgtctggatgcccaggcaaaagtttgctgcaggggcagggccctcatggaga
acctctgctaggtcagtgtggaagggaaatgtggggttggggtcctcacacagagtccct
actggggcactgactagtggagctgtgggaagagggccaccatcctccaggtcccagaat
ggtagatccactgacagcatgcaccatgcacctggaaaagccacagacactcgacgccat
cccatgaaagcagccagaagggaggctgtaccctgcaaagccacaggggtggagctgccc
aagaccacgggaacccacttcttgcatcagcttgactag

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_5|158_aa
MTRMGVVAHACNHSTLGGREPLAEGVAIVSAGSADSVFPPAGSEESGQSGRVGFPPAQHT
RLSKGQSECFLKRILDPMPPDWMRSPSRGRQTLYRGAFPLAQVGASLGGSSQRKEQAAIS
AVLQPPLISPGKGGTQVNRAWSGPPANHSSPTEEGPDC

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_5|477_bp
atgaccaggatgggcgtggtggctcatgcctgtaatcacagcactttgggaggccgagag
ccccttgcagaaggagtggccatagtctccgcaggatcagctgactcagtctttccccct
gctggctctgaggaatccgggcagtccggaagagtgggattcccaccagcacagcacacc
cgcttgtccaaggggcagtcagagtgcttccttaaacggatcctggatcccatgcctcct
gactggatgagatcccccagtagaggtcgccagacactttataggggagcgttcccactg
gctcaggtaggtgcttctctgggtgggagctcccagaggaaggagcaggcagccatctct
gctgttctgcagcctccactgatatctccagggaagggaggcacccaggtgaatagggcc
tggagtggacccccagcaaaccacagcagccctacggaagaggggcctgactgttaa

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_6|117_aa
MGPGDFRRCRERISQGLQGLPGRAELWFPPRPACDFFGDGRSTDIQEEALAASPLLEDLR
RRLTRAFQWAVEMHFQNHQLARTLLDLNMKVQQLKKEYELEITSDSQSPKDDAANPE

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_6|354_bp
atgggccccggggacttccgccgctgcagagagagaatttcccaggggctccagggactc
ccaggtagagcggagctttggttcccacctcgtcccgcgtgcgacttcttcggggacggc
aggagcacggacatccaggaggaggccctcgccgccagcccgctgctggaggacctcaga
cgacggctgacgcgcgccttccagtgggcggtggaaatgcatttccaaaaccaccagctg
gctagaactttactggacctaaacatgaaagtgcagcaattgaaaaaggagtatgaactg
gaaattacatcagactcccaaagcccaaaagatgatgctgcgaatccggaataa

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_7|179_aa
MLAALAALARSQRLLGLGVRSGHAREALQPDTALWGPLSGLANAGASSLCLWGGRGEALS
PPICINVRIRKQMRGTQPPEKQCLTQATVIGVHPSESYCPALSSDGTRGCQTRGNRGCGN
GSSSNSESNQERRQLALEGIVPGSRHRGILAVITAVNRADGCAGTLGPARKGAGEMRFL

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_7|540_bp
atgctggcagccctcgcagcccttgctcgctctcagcgcctcctcggcctcggcgtccgc
tctgggcatgctcgagaagcccttcagcccgacactgcgctctgggggcccctctctggg
ctggccaatgcgggagccagctccctctgcttgtggggaggaagaggtgaagccctctca
cccccaatatgcatcaatgtcagaatcaggaagcagatgagaggtacacagccccctgag
aagcagtgcttgacacaggctactgtaataggtgtccacccatctgaatcctactgccca
gcactcagctcagatggaacaagaggctgccagacgagaggaaacagaggctgcggcaat
ggcagcagcagcaacagtgaaagcaaccaagagagaaggcagctggcactggagggcatc
gtgccaggttccaggcacagagggattctggcagtgattacagcggtaaatagagctgat
ggttgtgccgggaccctaggccctgccaggaagggagcaggggagatgagattcttataa

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_8|206_aa
MSELPFTITSKRIKYLGIQLTRDVKDLFRENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KIAILPKVIYRFSAIPIKLPMTSFTESEETTLKFIWNQKRAHIAKTILSQKNKAGCIKLP
DFKLYYKATVTKTACQLIPLSTVKLRPSSFRLLASNPVPLAWTTPFPLMVPEFSNLQHKN
TEPTQRIVAMSSKEDIEIKVSECHGG

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_8|621_bp
atgagtgaactcccattcacaattacttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcagggagaactacaaaccgctgctcaacgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatattgtg
aaaatagccatactgcccaaggtgatttatagattcagtgccatccccatcaagctacca
atgacttccttcacagaatcggaagaaactactttaaagttcatatggaaccaaaaaaga
gcccacattgccaagacaatcctaagccaaaagaacaaagctggatgcatcaagctacct
gacttcaaactatattacaaggctacagtaaccaaaacagcatgtcaactgataccgtta
agtaccgtgaagctcaggccttcttctttccgtctgctggctagcaatccagtccccctt
gcatggacaactccttttcctctcatggtaccagagttttccaatttgcagcacaagaat
acagagcctacgcagagaatcgtggccatgtcgagtaaagaagatatagagattaaagtt
tcagagtgccatggtggctga

>gi568815590f:116838244_117042698|GENSCAN_predicted_peptide_9|203_aa
MGEWAQIPMTELSGPGRGQTFKSCVKIFSQSTLTVGPDASSPSILAPYSLKMTTIYIPGL
GGVKLWDEDGNPSYGSLKGPKNYLGGTEGDGAFVRSMELHFRSYEGKAEGRCRGEKRREN
CLSLHSKEQSVPLVNLVDCNPLADFGHADARRGLPQPWAAPSRSDIECLKLFQVQGASCQ
WIYHSGMWRTVALFSQFHEAVPQ

>gi568815590f:116838244_117042698|GENSCAN_predicted_CDS_9|612_bp
atgggggagtgggcgcaaattcctatgaccgagttgtctggacctgggcgagggcaaaca
tttaaatcttgtgtgaagatttttagtcagtccaccctcactgtgggccctgacgcttcc
agtccaagtatattagcaccttacagcttaaaaatgacaaccatatatatacctggactt
ggtggtgtcaagctttgggatgaagatggaaatccttcttatgggagtctaaaggggcca
aagaattatctaggagggacagagggtgatggtgcatttgttcgtagcatggagctgcac
tttaggagttatgaaggcaaggcagaagggagatgcaggggggagaaaaggagagagaac
tgcctgtcccttcacagcaaagaacaaagtgttcctttagtgaatcttgttgattgcaat
cccctggctgactttgggcatgctgatgcaaggcgtgggctcccacagccttgggcagct
ccttcacggtctgacattgagtgcctgaagcttttccaggtgcagggtgcaagctgtcag
tggatctaccattctgggatgtggaggacagtggccctcttctcacagttccacgaagca
gtgccccagtga