GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:59:23

Sequence gi568815583r:52009851_52212726 : 202876 bp : 44.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1650   1645    6                               1.05
 1.02 Term -   9168   8959  210  0  0   39   44   103 0.667  -1.71
 1.01 Init -   9643   9545   99  1  0   83   38   182 0.931  10.96
 1.00 Prom -  34866  34827   40                               0.04

 2.00 Prom +  35676  35715   40                              -5.46
 2.01 Init +  36611  37165  555  1  0   68   95   316 0.957  25.27
 2.02 Intr +  40143  40287  145  2  1   88   92    57 0.930   5.96
 2.03 Intr +  48783  48947  165  1  0   87   67    80 0.975   5.73
 2.04 Intr +  51449  51650  202  0  1  101   94   112 0.997  11.44
 2.05 Term +  54052  55150 1099  1  1   64   41   508 0.999  35.26
 2.06 PlyA +  55355  55360    6                               1.05

 3.00 Prom +  70161  70200   40                              -2.06
 3.01 Init +  77914  77921    8  0  2  103   91     0 0.860   2.30
 3.02 Intr +  84407  84638  232  2  1   99   74    88 0.903   6.28
 3.03 Term +  85394  85561  168  1  0   37   42   202 0.999   8.38
 3.04 PlyA +  85649  85654    6                               1.05

 4.03 PlyA -  86590  86585    6                               1.05
 4.02 Term -  92873  92784   90  2  0   92   39    57 0.045  -1.08
 4.01 Init - 102876 102388  489  0  0   85   80   833 0.610  77.40
 4.00 Prom - 106643 106604   40                              -4.36

 5.13 PlyA - 108541 108536    6                               1.05
 5.12 Term - 110056 109976   81  1  0   93   48    -1 0.191  -5.91
 5.11 Intr - 110520 110452   69  0  0   63   86    75 0.399   4.18
 5.10 Intr - 114789 114623  167  1  2   61   52   107 0.870   4.08
 5.09 Intr - 116194 116098   97  1  1   68   83    93 0.984   6.38
 5.08 Intr - 118394 118346   49  1  1   63   92    55 0.545   2.08
 5.07 Intr - 123619 123528   92  1  2   88   77   183 0.438  15.99
 5.06 Intr - 125255 125142  114  2  0  114   93   -16 0.797   2.14
 5.05 Intr - 125906 125763  144  2  0   86   55   204 0.974  17.38
 5.04 Intr - 131422 131290  133  0  1   86   99   181 0.983  19.65
 5.03 Intr - 137685 137609   77  0  2   65  106     8 0.047  -1.39
 5.02 Intr - 140075 140034   42  2  0  141  100    42 0.970   9.14
 5.01 Init - 144329 144090  240  2  0   58   91   211 0.795  16.38
 5.00 Prom - 147714 147675   40                              -0.66

 6.00 Prom + 148461 148500   40                              -5.46
 6.01 Init + 148510 148519   10  0  1   99   79     9 0.905   0.67
 6.02 Intr + 149443 149573  131  2  2   58   77   108 0.935   7.11
 6.03 Term + 149636 149770  135  1  0   76   47    72 0.693  -0.08
 6.04 PlyA + 150772 150777    6                               1.05

 7.09 PlyA - 152472 152467    6                               1.05
 7.08 Term - 154136 153663  474  2  0   97   36   121 0.001   2.69
 7.07 Intr - 163964 163921   44  0  2   90   24    54 0.002  -2.84
 7.06 Intr - 170029 169918  112  1  1   23   75   263 0.013  18.45
 7.05 Intr - 185607 185527   81  0  0   88   94    44 0.950   4.83
 7.04 Intr - 186633 186459  175  2  1  114   60   123 0.985  12.04
 7.03 Intr - 195297 195015  283  1  1   95   98   499 0.755  48.08
 7.02 Intr - 199333 199297   37  1  1   62   95    -3 0.206  -4.36
 7.01 Intr - 202034 201880  155  0  2   94   97   224 0.504  23.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 135050 134980   71  2  2   98   45   101 0.949   7.26
S.002 Init + 153205 153265   61  0  1   94  101    41 0.944   7.42


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_1|102_aa
MEEGAGSAVAAAAAAAGPAAAPSRAAPPAHPAHGGRQLGPFALLPALALREQSDQTQCQR
LLSTYYVQGTGQSERKRPQSPGRVDLKMDWLEGDSPSTRQTR

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_1|309_bp
atggaggagggagccggctccgccgtcgccgccgccgccgccgccgccgggcccgccgcg
gcgccctcccgagccgccccgccggcgcaccccgcacacggaggaagacagctggggccg
tttgctctactacctgccctggcattaagggaacaaagtgaccaaacccagtgccagcgt
ttactaagcacctactacgtgcaaggcactgggcaatccgagaggaagaggcctcagtct
ccaggaagggtggaccttaagatggattggctggaaggcgacagcccgagcacaagacag
acgcgttag

>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_2|721_aa
MAEKFESLMNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK
HALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE
QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP
HYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ
MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFS
PMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIEDEVDDILLMDETHSHIYNWERYHDC
QFSEHDWPVHNNFDIDEVQLDPRALSDVTDEEEVQVDPRKYLDGDREKYLEDPAFDTNYS
TEPCWQYSDHHENKYCDLECSHTCNYKTRSSSYLDNLVWRESEVNHYYEPKLIIDLSNWK
EQSKEKSDKKGKSKCERNGLVKAQIALEEASQQLAGKEREKNQGFDFDSFIAGTIQLSSQ
HEPTDVVDKLNDLNSSVSQLELKSLISKSVSQEKQEKGMANLAQLEALYQSSWDSQFVSG
GEDCFFINQFCEVRKDEQVEKENTYTSYLDKFFSRKEDTEMLETEPVEDGKLGERGHEEG
FLNNSGEFLFNKQLESIGIPQFHSPVGSPLKSIQATLTPSAMKSSPQIPHQTYSSILKHL
N

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_2|2166_bp
atggcagagaaatttgaaagtctcatgaacattcatggttttgatctgggttctaggtat
atggacttaaaaccattgggttgtggaggcaatggcttggttttttctgctgtagacaat
gactgtgacaaaagagtagccatcaagaaaattgtccttactgatccccagagtgtcaaa
catgctctacgtgaaatcaaaattattagaagacttgaccatgataacattgtgaaagtg
tttgagattcttggtcccagtggaagccaattaacagacgatgtgggctctcttacggaa
ctgaacagtgtttacattgttcaggagtacatggagacagacttggctaatgtgctggag
cagggccctttactggaagagcatgccaggcttttcatgtatcagctgctacgggggctc
aagtatattcactctgcaaatgtactgcacagagatctcaaaccagctaatcttttcatt
aatacggaagacttggtgctgaagataggtgactttggtcttgcacggatcatggatcct
cattattcccataagggtcatctttctgaaggattggttactaaatggtacagatctcca
cgtcttttactttctcctaataattatactaaagccattgacatgtgggctgcaggctgc
atctttgctgaaatgctgactggtaaaaccctttttgcaggtgcacatgaacttgaacag
atgcagctgattttagaatctattcctgttgtacatgaggaagatcgtcaggagcttctc
agcgtaattccagtttacattagaaatgacatgactgagccacacaaacctttaactcag
ctgcttccaggaattagtcgagaagcactggatttcctggaacaaattttgacatttagc
cccatggatcggttaacagcagaagaagcactctcccatccttacatgagcatatattct
tttccaatggatgagccaatttcaagccatccttttcatattgaagatgaagttgatgat
attttgcttatggatgaaactcacagtcacatttataactgggaaaggtatcatgattgt
cagttttcagagcatgattggcctgtacataacaactttgatattgatgaagttcagctt
gatccaagagctctgtccgatgtcactgatgaagaagaagtacaagttgatccccgaaaa
tatttggatggagatcgggaaaagtatctggaggatcctgcttttgataccaattactct
actgagccttgttggcaatactcagatcatcatgaaaacaaatattgtgatctggagtgt
agccatacttgtaactacaaaacgaggtcatcatcatatttagataacttagtttggaga
gagagtgaagttaaccattactatgaacccaagcttattatagatctttccaattggaaa
gaacaaagcaaagaaaaatctgataagaaaggcaaatcaaaatgtgaaaggaatggattg
gttaaagcccagatagcgctagaggaagcatcacagcaactggctggaaaagaaagggaa
aagaatcagggatttgattttgattcctttattgcaggaactattcagcttagttcccag
catgagcctactgatgttgttgataaattaaatgacttgaatagctcagtgtcccaacta
gaattgaaaagtttgatatcaaagtcagtaagccaagaaaaacaggaaaaaggaatggca
aatctggctcaattagaagccttgtaccagtcttcttgggacagccagtttgtgagtggt
ggggaggactgttttttcataaatcagttttgtgaggtaaggaaggatgaacaagttgag
aaggaaaacacttacactagttacttggacaagttctttagcaggaaagaagatactgaa
atgctagaaactgagccagtagaggatgggaagcttggggagagaggacatgaggaagga
tttctgaacaacagtggggagttcctctttaacaagcagctcgagtccataggcatccca
cagtttcacagtccagttgggtcaccacttaagtcaatacaggccacattaacaccttct
gctatgaaatcttcccctcaaattcctcatcaaacatacagcagcattctgaaacatctg
aactaa

>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_3|135_aa
MPSSSQLLALSSFPWKNIPAVGAWNTPASATPLWPDVYGCVNVQQEASGFHPGAKVYGAS
RLERTVWLTEVACLAAGSTYVGTFNNVATLHCLTAAIMGRMHAPGKGPSRLALPYRHSIP
TWLKLTSDDVKEQIY

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_3|408_bp
atgcccagctcatctcagctgcttgccctctcatcctttccttggaaaaacatcccagct
gttggggcctggaatactccagcatcagccacacccctctggcctgatgtgtatggctgt
gtcaatgtgcagcaggaggcaagtggcttccaccctggtgccaaggtctatggagccagc
agactggagaggacagtctggctgacagaggtggcctgccttgcagctggaagcacttac
gtgggaacatttaataacgtggccacacttcactgcctgactgccgccatcatgggtcgc
atgcatgctcctgggaagggcccgtcccggttggctttgccctatcgccacagcatcccc
acttggctgaagttgacatctgatgacgtgaaggagcagatttactaa

>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_4|192_aa
MVDQLRERTTMADPLRERTELLLADYLGYCAREPGTPEPAPSTPEAAVLRSAAARLRQIH
RSFFSAYLGYPGNRFELVALMADSVLSDSPGPTWGRVVTLVTFAGTLLERGPLVTARWKK
WGFQPRLKEQEGDVARDCQRLVALLSSRLMGQHRAWLQAQGGWGELIACMNADGSDARDG
AFDDAGRRGEEI

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_4|579_bp
atggttgaccagttgcgggagcgcaccaccatggccgacccgctgcgggagcgcaccgag
ctgttgctggccgactacctggggtactgcgcccgggaacccggcacccccgagccggcg
ccatccacgcccgaggccgccgtgctgcgctccgcggccgccaggttacggcagattcac
cggtcctttttctccgcctacctcggctaccccgggaaccgcttcgagctggtggcgctg
atggcggattccgtgctctccgacagccccggccccacctggggcagagtggtgacgctc
gtgaccttcgcagggacgctgctggagagagggccgctggtgaccgcccggtggaagaag
tggggcttccagccgcggctaaaggagcaggagggcgacgtcgcccgggactgccagcgc
ctggtggccttgctgagctcgcggctcatggggcagcaccgcgcctggctgcaggctcag
ggcggctggggagaattaatagcatgcatgaatgcagatggaagtgatgcaagagatgga
gcatttgatgatgcaggcaggagaggagaggagatctag

>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_5|434_aa
MGPPPSAEHMSVLCQPKAQNLVLSKGTDYGLVIPVHQVAERVEALGQFVMKTRRTLKGHG
NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACG
GLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE
SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGARNRGFESSELADRATETQRSTRLGVR
VPGSGLCYLTGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRL
YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE
NRVSTLRVSPDGTAFCSGSWDHTLRWVLSGFADEILDLDYVTACGDSGVISGLKQHRVVR
AFVSRALIVARPAG

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_5|1305_bp
atggggccgcctccctctgcggaacatatgtctgtgctgtgtcagcccaaagcccagaac
ctggtccttagcaaggggactgactatggccttgtcattccagtgcaccaggtggcggag
cgggtggaggccctggggcagtttgtcatgaagaccagaaggaccctcaaaggccacggg
aacaaagtcctgtgcatggactggtgcaaagataagaggaggatcgtgagctcgtcacag
gatgggaaggtgatcgtgtgggattccttcaccacaaacaaggagcacgcggtcaccatg
ccctgcacgtgggtgatggcatgtgcttatgccccatcgggatgtgccattgcttgtggt
ggtttggataataagtgttctgtgtaccccttgacgtttgacaaaaatgaaaacatggct
gccaaaaagaagtctgttgctatgcacaccaactacctgtcggcctgcagcttcaccaac
tctgacatgcagatcctgacagcgagcggcgatggcacatgtgccctgtgggacgtggag
agcgggcagctgctgcagagcttccacggacatggggctgacgtcctctgcttggacctg
gccccctcagaaactggaaacaccttcgtgtctgggggtgcaagaaacagaggctttgaa
agctcagaattggcagacagggccacagagactcagagaagcactagactaggagtcagg
gtgcctgggtcagggctttgctacctgactggatgtgacaagaaagccatggtgtgggac
atgcgctccggccagtgcgtgcaggcctttgaaacacatgaatctgacatcaacagtgtc
cggtactaccccagtggagatgcctttgcttcagggtcagatgacgctacgtgtcgcctc
tatgacctgcgggcagatagggaggttgccatctattccaaagaaagcatcatatttgga
gcatccagcgtggacttctccctcagtggtcgcctgctgtttgctggatacaatgattac
actatcaacgtctgggatgttctcaaagggtcccgggtctccatcctgtttggacatgaa
aaccgcgttagcactctacgagtttcccccgatgggactgctttctgctctggatcatgg
gatcataccctcagatgggtgctgtcgggatttgctgatgagatacttgatttggactat
gtgacagcatgtggagactcaggggttataagtggcttaaaacagcacagggttgtaagg
gcctttgtgtcccgggctctcatagttgccaggccagctggctga

>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_6|91_aa
MAYTLEDSVDGDNTGGGKPGKRLLFFGSPLSSGHTICRTTLLCGPSKGEDACLCGLPAQL
GPLKLEMLNILDASPDQGIRIKVMAGTQEEV

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_6|276_bp
atggcgtacacgttggaggacagcgtcgatggagacaacactggaggagggaaaccaggg
aagagactcctcttctttggcagccccctctccagcggacacaccatctgccgcaccacg
cttctttgtggtccctccaagggagaggacgcttgcctctgtggcctccctgctcagttg
ggtcctctgaagcttgagatgctgaatattctggatgccagtccagaccaaggaatcaga
atcaaagtcatggctggaactcaagaggaagtgtag

>gi568815583r:52009851_52212726|GENSCAN_predicted_peptide_7|453_aa
XLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKLCLHCLFL
FFLPFPGMLEYESLQGISGLKPTGFRKRSSSIDDTDGYTMTSVLQQLSYFYTTMCQNGLD
PELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSLAK
ETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFV
RKVQMATEGLHENETLASLKSEAESLKGKLEEERAKLHDVEPLSLIDEKAAEIQGGGCCG
LLGVHSRPLLPGSLLHLEVSPVKAAKQQRWHPAPSSGDSIPEGHQPDASWNAPGGGICRP
LLGGLTQSRGMGSGTRLKKQSGCPLVEQIRCAGGNLPHPDHPDSPEHPGPTESSSLAMIC
HSSCAALWGIPPSLDHPDSQELAGQDGLLELQR

>gi568815583r:52009851_52212726|GENSCAN_predicted_CDS_7|1362_bp
nacttgaagccccgtggcgtggtggtgaacatgatccccgggctgccggctcatatcctg
ttcatgtgtgtgcgctacgcagactctctgaatgatgccaacatgctgaagtccctcatg
aacagcaccattaatggcatcaagcaggtggttaagctctgccttcactgcttgttcctc
ttcttcctgccctttccgggaatgctggagtatgagagcctgcagggcatttccggcctg
aagcccacaggcttccggaagcgctcctctagcatagacgacacggacggctacaccatg
acctccgtcctgcaacagctgagctacttttacaccaccatgtgccagaacggcctggac
cccgagcttgtgaggcaggcggtgaagcagctcttcttcttgatcggggcggtcacgctg
aacagcctcttcctgcgcaaggacatgtgctcctgcagaaaagggatgcagatcaggtgc
aatatcagctacttagaagaatggcttaaagataagaacttgcagaacagcttagcaaag
gaaactttggagcccctctctcaggcagcctggttgcttcaggtcaagaagaccacagac
agtgatgccaaggagatctacgaacgctgcacctcactgtctgctgtgcagatcataaag
atccttaattcatacacacctatagatgactttgagaagagagtgactccatcctttgtt
cgcaaagtacagatggcaaccgaggggctgcacgagaacgagacgctggcgtcgctgaag
agcgaggccgagagcctcaagggcaagctggaggaggagcgagccaagctgcacgatgtg
gagcccctgtcccttatagatgaaaaagcagctgagatccagggagggggctgctgcggt
ttgctgggggtccactccagacccttattgcctgggtccctcctgcacctggaggtatca
ccagtgaaggctgcaaaacagcaaagatggcatccagctccttcctctggagactccatc
ccagaggggcaccaacctgatgccagctggaacgctcctggaggaggcatttgtagaccc
ctgttgggaggtctcacccagtcaagaggaatgggatcagggacccgcttaaagaagcag
tctggctgccccctggtggagcagatacgctgtgctgggggaaacctccctcatccagac
cacccagactctccagagcatccaggtcccactgaaagtagcagtctggccatgatctgc
cacagcagctgtgctgcgctgtggggaattcctcccagtttggaccaccctgactcccag
gagctggcaggccaggatggcctacttgagctgcagagatag