FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6432, 344 aa
  1>>>pF1KB6432 344 - 344 aa - 344 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9624+/-0.000812; mu= 14.0403+/- 0.049
 mean_var=84.0879+/-16.607, 0's: 0 Z-trim(108.7): 13  B-trim: 0 in 0/50
 Lambda= 0.139864
 statistics sampled from 10356 (10363) to 10356 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.318), width:  16
 Scan time:  2.410

The best scores are:                                      opt bits E(32554)
CCDS9658.1 MBIP gene_id:51562|Hs108|chr14          ( 344) 2243 462.1 3.1e-130
CCDS45096.1 MBIP gene_id:51562|Hs108|chr14         ( 343) 2224 458.2 4.4e-129
CCDS76672.1 MBIP gene_id:51562|Hs108|chr14         ( 282) 1718 356.1   2e-98


>>CCDS9658.1 MBIP gene_id:51562|Hs108|chr14               (344 aa)
 initn: 2243 init1: 2243 opt: 2243  Z-score: 2451.7  bits: 462.1 E(32554): 3.1e-130
Smith-Waterman score: 2243; 99.4% identity (99.4% similar) in 344 aa overlap (1-344:1-344)

               10        20        30        40        50        60
pF1KB6 MAAATEHNRPSSGDRNLERRCSPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKL
       :::::: :::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS96 MAAATELNRPSSGDRNLERRCRPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QSLSAFQPALLFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 QSLSAFQPALLFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 IGDLQEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 IGDLQEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 EFCNVIDCNQENSCARTDAIFTPYPGFKSHVKVSRVVNTYGPQTRPEGIPGSGHKPNSML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 EFCNVIDCNQENSCARTDAIFTPYPGFKSHVKVSRVVNTYGPQTRPEGIPGSGHKPNSML
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 RDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLEDKILELEGISPEYFQSVSFSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 RDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLEDKILELEGISPEYFQSVSFSG
              250       260       270       280       290       300

              310       320       330       340    
pF1KB6 KRRKVQPPQQNYSLAELDEKISALKQALLRKSREAESMATHHLP
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS96 KRRKVQPPQQNYSLAELDEKISALKQALLRKSREAESMATHHLP
              310       320       330       340    

>>CCDS45096.1 MBIP gene_id:51562|Hs108|chr14              (343 aa)
 initn: 2028 init1: 2028 opt: 2224  Z-score: 2431.0  bits: 458.2 E(32554): 4.4e-129
Smith-Waterman score: 2224; 99.1% identity (99.1% similar) in 344 aa overlap (1-344:1-343)

               10        20        30        40        50        60
pF1KB6 MAAATEHNRPSSGDRNLERRCSPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKL
       :::::: :::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS45 MAAATELNRPSSGDRNLERRCRPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QSLSAFQPALLFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QSLSAFQPALLFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 IGDLQEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IGDLQEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 EFCNVIDCNQENSCARTDAIFTPYPGFKSHVKVSRVVNTYGPQTRPEGIPGSGHKPNSML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EFCNVIDCNQENSCARTDAIFTPYPGFKSHVKVSRVVNTYGPQTRPEGIPGSGHKPNSML
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 RDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLEDKILELEGISPEYFQSVSFSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLEDKILELEGISPEYFQSVSFSG
              250       260       270       280       290       300

              310       320       330       340    
pF1KB6 KRRKVQPPQQNYSLAELDEKISALKQALLRKSREAESMATHHLP
       ::::::::: ::::::::::::::::::::::::::::::::::
CCDS45 KRRKVQPPQ-NYSLAELDEKISALKQALLRKSREAESMATHHLP
               310       320       330       340   

>>CCDS76672.1 MBIP gene_id:51562|Hs108|chr14              (282 aa)
 initn: 1718 init1: 1718 opt: 1718  Z-score: 1880.4  bits: 356.1 E(32554): 2e-98
Smith-Waterman score: 1718; 99.2% identity (99.2% similar) in 263 aa overlap (1-263:1-263)

               10        20        30        40        50        60
pF1KB6 MAAATEHNRPSSGDRNLERRCSPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKL
       :::::: :::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS76 MAAATELNRPSSGDRNLERRCRPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QSLSAFQPALLFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 QSLSAFQPALLFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 IGDLQEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 IGDLQEEEKHKESDLRDVKKTQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 EFCNVIDCNQENSCARTDAIFTPYPGFKSHVKVSRVVNTYGPQTRPEGIPGSGHKPNSML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EFCNVIDCNQENSCARTDAIFTPYPGFKSHVKVSRVVNTYGPQTRPEGIPGSGHKPNSML
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 RDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLEDKILELEGISPEYFQSVSFSG
       :::::::::::::::::::::::                                     
CCDS76 RDCGNQAVEERLQNIEAHLRLQTELFWKKKKSSTTSTELFTG                  
              250       260       270       280                    




344 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:57:46 2016 done: Fri Nov  4 22:57:47 2016
 Total Scan time:  2.410 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]