Result of FASTA (omim) for pF1KB6764
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6764, 148 aa
  1>>>pF1KB6764 148 - 148 aa - 148 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9027+/-0.000362; mu= 13.4657+/- 0.022
 mean_var=57.1546+/-11.697, 0's: 0 Z-trim(112.8): 25  B-trim: 694 in 1/51
 Lambda= 0.169648
 statistics sampled from 21793 (21812) to 21793 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.256), width:  16
 Scan time:  4.540

The best scores are:                                      opt bits E(85289)
NP_000230 (OMIM: 105200,153450) lysozyme C precurs ( 148) 1028 259.5 1.4e-69
NP_776246 (OMIM: 612749) sperm acrosome membrane-a ( 215)  500 130.4 1.5e-30
XP_016885001 (OMIM: 300593) PREDICTED: sperm acros ( 159)  482 125.9 2.5e-29
NP_995328 (OMIM: 300593) sperm acrosome-associated ( 159)  482 125.9 2.5e-29
NP_898881 (OMIM: 612748) lysozyme-like protein 2 [ ( 194)  482 126.0   3e-29
NP_065159 (OMIM: 612751) lysozyme-like protein 6 p ( 148)  428 112.7 2.2e-25
NP_001186880 (OMIM: 612751) lysozyme-like protein  ( 148)  428 112.7 2.2e-25
XP_016861195 (OMIM: 612750) PREDICTED: lysozyme-li ( 146)  382 101.4 5.4e-22
NP_653235 (OMIM: 612750) lysozyme-like protein 4 p ( 146)  382 101.4 5.4e-22
NP_001291315 (OMIM: 612750) lysozyme-like protein  ( 146)  382 101.4 5.4e-22
XP_016861194 (OMIM: 612750) PREDICTED: lysozyme-li ( 146)  382 101.4 5.4e-22
NP_001304155 (OMIM: 612749) sperm acrosome membran ( 112)  359 95.7 2.2e-20
NP_001304154 (OMIM: 612749) sperm acrosome membran ( 123)  355 94.8 4.6e-20
NP_002280 (OMIM: 149750) alpha-lactalbumin precurs ( 142)  334 89.7 1.8e-18
XP_006719458 (OMIM: 149750) PREDICTED: alpha-lacta ( 149)  334 89.7 1.9e-18
XP_011517608 (OMIM: 612748) PREDICTED: lysozyme-li ( 181)  334 89.7 2.2e-18
XP_011531657 (OMIM: 612750) PREDICTED: lysozyme-li ( 146)  321 86.5 1.7e-17
XP_011517609 (OMIM: 612748) PREDICTED: lysozyme-li ( 163)  319 86.0 2.6e-17


>>NP_000230 (OMIM: 105200,153450) lysozyme C precursor [  (148 aa)
 initn: 1028 init1: 1028 opt: 1028  Z-score: 1370.2  bits: 259.5 E(85289): 1.4e-69
Smith-Waterman score: 1028; 99.3% identity (100.0% similar) in 148 aa overlap (1-148:1-148)

               10        20        30        40        50        60
pF1KB6 MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVRD
       :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
NP_000 TNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRD
               70        80        90       100       110       120

              130       140        
pF1KB6 PQGIRAWVAWRNRCQNRDVRQYVQGCGV
       ::::::::::::::::::::::::::::
NP_000 PQGIRAWVAWRNRCQNRDVRQYVQGCGV
              130       140        

>>NP_776246 (OMIM: 612749) sperm acrosome membrane-assoc  (215 aa)
 initn: 478 init1: 222 opt: 500  Z-score: 669.4  bits: 130.4 E(85289): 1.5e-30
Smith-Waterman score: 500; 48.6% identity (78.5% similar) in 144 aa overlap (3-146:73-213)

                                           10        20        30  
pF1KB6                             MKALIVLGLVLLSVTVQGKVFERCELARTLKR
                                     ::. :   ::  . ..:.. ::::::.:. 
NP_776 SGGGSTSAAGIEARSRALRRRWCPAGIMLLALVCLLSCLLPSS-EAKLYGRCELARVLHD
             50        60        70        80         90       100 

             40        50        60        70        80        90  
pF1KB6 LGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAV
       .:.::::: :::.:.::: . ::.:. : .:.: : ::. :::::::: ::..  .:.. 
NP_776 FGLDGYRGYSLADWVCLAYFTSGFNAAALDYEA-DGSTNNGIFQINSRRWCSN-LTPNVP
             110       120       130        140       150          

            100       110       120       130       140        
pF1KB6 NACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
       :.:.. :: ::. :. :.: :: .....:::.  : :::..::..:. ..:.::  
NP_776 NVCRMYCSDLLNPNLKDTVICAMKITQEPQGLGYWEAWRHHCQGKDLTEWVDGCDF
     160       170       180       190       200       210     

>>XP_016885001 (OMIM: 300593) PREDICTED: sperm acrosome-  (159 aa)
 initn: 451 init1: 192 opt: 482  Z-score: 647.5  bits: 125.9 E(85289): 2.5e-29
Smith-Waterman score: 482; 42.3% identity (77.9% similar) in 149 aa overlap (1-146:1-147)

                  10        20        30        40        50       
pF1KB6 MKA---LIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYN
       :::   ..:   .:. :::..:..::::::  :.: :..::.: ....:.:.:..:::..
XP_016 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB6 TRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRV
       :  ...:  : :..:::::.:: .::..: .:   : ::..:  ::. .: : . :::..
XP_016 TAFVDHNP-DGSSEYGIFQLNSAWWCDNGITPTK-NLCHMDCHDLLNRHILDDIRCAKQI
                70        80        90        100       110        

       120       130       140                  
pF1KB6 VRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV          
       : . .:. ::..:: .:...:. ....::            
XP_016 VSSQNGLSAWTSWRLHCSGHDLSEWLKGCDMHVKIDPKIHP
      120       130       140       150         

>>NP_995328 (OMIM: 300593) sperm acrosome-associated pro  (159 aa)
 initn: 451 init1: 192 opt: 482  Z-score: 647.5  bits: 125.9 E(85289): 2.5e-29
Smith-Waterman score: 482; 42.3% identity (77.9% similar) in 149 aa overlap (1-146:1-147)

                  10        20        30        40        50       
pF1KB6 MKA---LIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYN
       :::   ..:   .:. :::..:..::::::  :.: :..::.: ....:.:.:..:::..
NP_995 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB6 TRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRV
       :  ...:  : :..:::::.:: .::..: .:   : ::..:  ::. .: : . :::..
NP_995 TAFVDHNP-DGSSEYGIFQLNSAWWCDNGITPTK-NLCHMDCHDLLNRHILDDIRCAKQI
                70        80        90        100       110        

       120       130       140                  
pF1KB6 VRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV          
       : . .:. ::..:: .:...:. ....::            
NP_995 VSSQNGLSAWTSWRLHCSGHDLSEWLKGCDMHVKIDPKIHP
      120       130       140       150         

>>NP_898881 (OMIM: 612748) lysozyme-like protein 2 [Homo  (194 aa)
 initn: 472 init1: 210 opt: 482  Z-score: 646.2  bits: 126.0 E(85289): 3e-29
Smith-Waterman score: 482; 45.6% identity (73.2% similar) in 149 aa overlap (1-148:47-193)

                                             10         20         
pF1KB6                               MKALIVLGLVLLSVT-VQGKVFERCELART
                                     :::  .: :.   :: ...:.. ::.::. 
NP_898 VSSADSTEKSASAAGTRNLPFQFCLRQALRMKAAGILTLIGCLVTGAESKIYTRCKLAKI
         20        30        40        50        60        70      

      30        40        50        60        70        80         
pF1KB6 LKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKNP
       ..: :.:.: :.::.::.:.: .:::::: : .    : : :::::::::  ::  ::  
NP_898 FSRAGLDNYWGFSLGNWICMAYYESGYNTTAQTV-LDDGSIDYGIFQINSFAWCRRGKLK
         80        90       100       110        120       130     

      90       100       110       120       130       140         
pF1KB6 GAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV 
          : ::..::::. :...::. :::..:.. ::.  : .:...:..::. .. . : : 
NP_898 -ENNHCHVACSALVTDDLTDAIICAKKIVKETQGMNYWQGWKKHCEGRDLSDWKKDCEVS
          140       150       160       170       180       190    

>>NP_065159 (OMIM: 612751) lysozyme-like protein 6 precu  (148 aa)
 initn: 420 init1: 178 opt: 428  Z-score: 576.5  bits: 112.7 E(85289): 2.2e-25
Smith-Waterman score: 428; 42.1% identity (69.7% similar) in 145 aa overlap (2-146:3-145)

                10        20        30        40        50         
pF1KB6  MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
         :::..  .  . .  :.... ::.::..:.   .::..: ::..:.:::  :: .:  
NP_065 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVR
         : :: : : :::.:::::.::::: :. .  : ::..:. ::. :.  .. ::::.: 
NP_065 KINENA-DGSFDYGLFQINSHYWCNDYKSYSE-NLCHVDCQDLLNPNLLAGIHCAKRIVS
                70        80        90        100       110        

     120       130       140         
pF1KB6 DPQGIRAWVAWRNRCQNRDVRQYVQGCGV 
         .:.  :: :: .:..: .  .. ::   
NP_065 GARGMNNWVEWRLHCSGRPLFYWLTGCRLR
      120       130       140        

>>NP_001186880 (OMIM: 612751) lysozyme-like protein 6 pr  (148 aa)
 initn: 420 init1: 178 opt: 428  Z-score: 576.5  bits: 112.7 E(85289): 2.2e-25
Smith-Waterman score: 428; 42.1% identity (69.7% similar) in 145 aa overlap (2-146:3-145)

                10        20        30        40        50         
pF1KB6  MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
         :::..  .  . .  :.... ::.::..:.   .::..: ::..:.:::  :: .:  
NP_001 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVR
         : :: : : :::.:::::.::::: :. .  : ::..:. ::. :.  .. ::::.: 
NP_001 KINENA-DGSFDYGLFQINSHYWCNDYKSYSE-NLCHVDCQDLLNPNLLAGIHCAKRIVS
                70        80        90        100       110        

     120       130       140         
pF1KB6 DPQGIRAWVAWRNRCQNRDVRQYVQGCGV 
         .:.  :: :: .:..: .  .. ::   
NP_001 GARGMNNWVEWRLHCSGRPLFYWLTGCRLR
      120       130       140        

>>XP_016861195 (OMIM: 612750) PREDICTED: lysozyme-like p  (146 aa)
 initn: 404 init1: 191 opt: 382  Z-score: 515.8  bits: 101.4 E(85289): 5.4e-22
Smith-Waterman score: 382; 38.9% identity (65.1% similar) in 149 aa overlap (1-146:1-144)

               10         20        30        40        50         
pF1KB6 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
       ::: .::.:.   :. .:  .. :: .:. :.  :.: ..: :: ::.::: .:: .:  
XP_016 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
               10        20        30        40        50        60

      60        70        80         90       100       110        
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCND-GKNPGAVNACHLSCSALLQDNIADAVACAKRVV
       :   :. .  : .:.::. .  ::.: :.:      ::.::::::. :.  .. ::: .:
XP_016 AIYENTREGYTGFGLFQMRGSDWCGDHGRN-----RCHMSCSALLNPNLEKTIKCAKTIV
               70        80        90            100       110     

      120       130        140        
pF1KB6 RDPQGIRAWVAWRNRCQNRD-VRQYVQGCGV
       .  .:. :: .:   ::  : . ....::  
XP_016 KGKEGMGAWPTWSRYCQYSDTLARWLDGCKL
         120       130       140      

>>NP_653235 (OMIM: 612750) lysozyme-like protein 4 precu  (146 aa)
 initn: 404 init1: 191 opt: 382  Z-score: 515.8  bits: 101.4 E(85289): 5.4e-22
Smith-Waterman score: 382; 38.9% identity (65.1% similar) in 149 aa overlap (1-146:1-144)

               10         20        30        40        50         
pF1KB6 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
       ::: .::.:.   :. .:  .. :: .:. :.  :.: ..: :: ::.::: .:: .:  
NP_653 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
               10        20        30        40        50        60

      60        70        80         90       100       110        
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCND-GKNPGAVNACHLSCSALLQDNIADAVACAKRVV
       :   :. .  : .:.::. .  ::.: :.:      ::.::::::. :.  .. ::: .:
NP_653 AIYENTREGYTGFGLFQMRGSDWCGDHGRN-----RCHMSCSALLNPNLEKTIKCAKTIV
               70        80        90            100       110     

      120       130        140        
pF1KB6 RDPQGIRAWVAWRNRCQNRD-VRQYVQGCGV
       .  .:. :: .:   ::  : . ....::  
NP_653 KGKEGMGAWPTWSRYCQYSDTLARWLDGCKL
         120       130       140      

>>NP_001291315 (OMIM: 612750) lysozyme-like protein 4 pr  (146 aa)
 initn: 404 init1: 191 opt: 382  Z-score: 515.8  bits: 101.4 E(85289): 5.4e-22
Smith-Waterman score: 382; 38.9% identity (65.1% similar) in 149 aa overlap (1-146:1-144)

               10         20        30        40        50         
pF1KB6 MKALIVLGLVLLSVTVQGK-VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR
       ::: .::.:.   :. .:  .. :: .:. :.  :.: ..: :: ::.::: .:: .:  
NP_001 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM
               10        20        30        40        50        60

      60        70        80         90       100       110        
pF1KB6 ATNYNAGDRSTDYGIFQINSRYWCND-GKNPGAVNACHLSCSALLQDNIADAVACAKRVV
       :   :. .  : .:.::. .  ::.: :.:      ::.::::::. :.  .. ::: .:
NP_001 AIYENTREGYTGFGLFQMRGSDWCGDHGRN-----RCHMSCSALLNPNLEKTIKCAKTIV
               70        80        90            100       110     

      120       130        140        
pF1KB6 RDPQGIRAWVAWRNRCQNRD-VRQYVQGCGV
       .  .:. :: .:   ::  : . ....::  
NP_001 KGKEGMGAWPTWSRYCQYSDTLARWLDGCKL
         120       130       140      




148 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:52:18 2016 done: Fri Nov  4 23:52:19 2016
 Total Scan time:  4.540 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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