Result of FASTA (omim) for pF1KB6527
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6527, 365 aa
  1>>>pF1KB6527 365 - 365 aa - 365 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4484+/-0.000431; mu= 12.6880+/- 0.026
 mean_var=197.1482+/-44.263, 0's: 0 Z-trim(117.7): 367  B-trim: 1560 in 1/49
 Lambda= 0.091344
 statistics sampled from 29527 (29933) to 29527 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.351), width:  16
 Scan time:  7.020

The best scores are:                                      opt bits E(85289)
NP_060450 (OMIM: 607908,616827) LIM and senescent  ( 365) 2676 365.3 1.2e-100
NP_001154875 (OMIM: 607908,616827) LIM and senesce ( 341) 2489 340.6   3e-93
NP_001129509 (OMIM: 607908,616827) LIM and senesce ( 363) 2488 340.5 3.4e-93
NP_001154876 (OMIM: 607908,616827) LIM and senesce ( 336) 2481 339.6 6.2e-93
NP_001180413 (OMIM: 602567) LIM and senescent cell ( 362) 2204 303.1 6.4e-82
NP_001180411 (OMIM: 602567) LIM and senescent cell ( 329) 2161 297.4 3.1e-80
NP_001180412 (OMIM: 602567) LIM and senescent cell ( 337) 2159 297.1 3.7e-80
NP_001180414 (OMIM: 602567) LIM and senescent cell ( 387) 2159 297.2   4e-80
NP_004978 (OMIM: 602567) LIM and senescent cell an ( 325) 2152 296.2 6.9e-80
NP_001180417 (OMIM: 602567) LIM and senescent cell ( 325) 2152 296.2 6.9e-80
XP_005264005 (OMIM: 602567) PREDICTED: LIM and sen ( 373) 2135 294.0 3.5e-79
XP_005264006 (OMIM: 602567) PREDICTED: LIM and sen ( 348) 2090 288.1 2.1e-77
XP_005264003 (OMIM: 602567) PREDICTED: LIM and sen ( 398) 2090 288.2 2.2e-77
XP_005264008 (OMIM: 602567) PREDICTED: LIM and sen ( 336) 2083 287.1 3.8e-77
XP_005264007 (OMIM: 602567) PREDICTED: LIM and sen ( 336) 2083 287.1 3.8e-77
XP_005263767 (OMIM: 607908,616827) PREDICTED: LIM  ( 272) 2004 276.6 4.6e-74
XP_016859581 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1788 248.2 1.9e-65
XP_016859583 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1788 248.2 1.9e-65
XP_016859580 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1788 248.2 1.9e-65
XP_016859582 (OMIM: 602567) PREDICTED: LIM and sen ( 317) 1788 248.2 1.9e-65
XP_006712690 (OMIM: 607908,616827) PREDICTED: LIM  ( 225) 1632 227.5 2.4e-59
XP_011509755 (OMIM: 607908,616827) PREDICTED: LIM  ( 324) 1455 204.4 3.1e-52
NP_001243471 (OMIM: 607908,616827) LIM and senesce ( 189) 1371 193.0 4.8e-49
XP_006712691 (OMIM: 607908,616827) PREDICTED: LIM  ( 190) 1052 150.9 2.2e-36
XP_016859958 (OMIM: 607908,616827) PREDICTED: LIM  ( 238)  628 95.2 1.6e-19
NP_001243354 (OMIM: 605904) PDZ and LIM domain pro ( 271)  470 74.4 3.3e-13
XP_011533001 (OMIM: 605903) PREDICTED: PDZ and LIM ( 309)  468 74.3 4.3e-13
NP_001243357 (OMIM: 605904) PDZ and LIM domain pro ( 474)  470 74.8 4.6e-13
NP_001011513 (OMIM: 605904) PDZ and LIM domain pro ( 487)  470 74.8 4.6e-13
XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM ( 493)  470 74.8 4.7e-13
XP_011533000 (OMIM: 605903) PREDICTED: PDZ and LIM ( 364)  468 74.4 4.7e-13
XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM ( 498)  470 74.8 4.7e-13
NP_976227 (OMIM: 605903) PDZ and LIM domain protei ( 423)  468 74.4 5.1e-13
NP_006448 (OMIM: 605904) PDZ and LIM domain protei ( 596)  470 74.9 5.2e-13
XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM ( 600)  470 74.9 5.3e-13
XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM ( 602)  470 74.9 5.3e-13
XP_006714133 (OMIM: 605904) PREDICTED: PDZ and LIM ( 605)  470 74.9 5.3e-13
XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM ( 607)  470 74.9 5.3e-13
XP_005262753 (OMIM: 605904) PREDICTED: PDZ and LIM ( 619)  470 74.9 5.3e-13
NP_005442 (OMIM: 605903) PDZ and LIM domain protei ( 457)  468 74.5 5.4e-13
NP_001243355 (OMIM: 605904) PDZ and LIM domain pro ( 625)  470 74.9 5.4e-13
XP_006714131 (OMIM: 605904) PREDICTED: PDZ and LIM ( 630)  470 74.9 5.4e-13
XP_005262752 (OMIM: 605904) PREDICTED: PDZ and LIM ( 728)  470 75.0 5.9e-13
XP_005262750 (OMIM: 605904) PREDICTED: PDZ and LIM ( 734)  470 75.0 5.9e-13
XP_006714129 (OMIM: 605904) PREDICTED: PDZ and LIM ( 739)  470 75.0 5.9e-13
NP_001243356 (OMIM: 605904) PDZ and LIM domain pro ( 483)  448 71.9 3.4e-12
NP_001309395 (OMIM: 605126) four and a half LIM do ( 284)  418 67.6 3.9e-11
NP_001164278 (OMIM: 605126) four and a half LIM do ( 284)  418 67.6 3.9e-11
NP_065228 (OMIM: 605126) four and a half LIM domai ( 284)  418 67.6 3.9e-11
NP_001309396 (OMIM: 605126) four and a half LIM do ( 284)  418 67.6 3.9e-11


>>NP_060450 (OMIM: 607908,616827) LIM and senescent cell  (365 aa)
 initn: 2676 init1: 2676 opt: 2676  Z-score: 1927.9  bits: 365.3 E(85289): 1.2e-100
Smith-Waterman score: 2676; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
              310       320       330       340       350       360

            
pF1KB6 DLNSA
       :::::
NP_060 DLNSA
            

>>NP_001154875 (OMIM: 607908,616827) LIM and senescent c  (341 aa)
 initn: 2488 init1: 2488 opt: 2489  Z-score: 1795.0  bits: 340.6 E(85289): 3e-93
Smith-Waterman score: 2489; 99.7% identity (99.7% similar) in 340 aa overlap (27-365:2-341)

               10        20         30        40        50         
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATG-NMSDALANAVCQRCQARFSPAERIVNSNGEL
                                 :: :::::::::::::::::::::::::::::::
NP_001                          MTGSNMSDALANAVCQRCQARFSPAERIVNSNGEL
                                        10        20        30     

      60        70        80        90       100       110         
pF1KB6 YHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNW
          40        50        60        70        80        90     

     120       130       140       150       160       170         
pF1KB6 HPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFR
         100       110       120       130       140       150     

     180       190       200       210       220       230         
pF1KB6 SDAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGK
         160       170       180       190       200       210     

     240       250       260       270       280       290         
pF1KB6 QWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKA
         220       230       240       250       260       270     

     300       310       320       330       340       350         
pF1KB6 WCVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WCVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKA
         280       290       300       310       320       330     

     360     
pF1KB6 TDLNSA
       ::::::
NP_001 TDLNSA
         340 

>>NP_001129509 (OMIM: 607908,616827) LIM and senescent c  (363 aa)
 initn: 2488 init1: 2488 opt: 2488  Z-score: 1794.0  bits: 340.5 E(85289): 3.4e-93
Smith-Waterman score: 2488; 100.0% identity (100.0% similar) in 337 aa overlap (29-365:27-363)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
                                   ::::::::::::::::::::::::::::::::
NP_001   MTGRKRKWGETGTGSGAAPAAALRWSNMSDALANAVCQRCQARFSPAERIVNSNGELY
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
      240       250       260       270       280       290        

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
      300       310       320       330       340       350        

            
pF1KB6 DLNSA
       :::::
NP_001 DLNSA
      360   

>>NP_001154876 (OMIM: 607908,616827) LIM and senescent c  (336 aa)
 initn: 2481 init1: 2481 opt: 2481  Z-score: 1789.4  bits: 339.6 E(85289): 6.2e-93
Smith-Waterman score: 2481; 100.0% identity (100.0% similar) in 336 aa overlap (30-365:1-336)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
                                    :::::::::::::::::::::::::::::::
NP_001                              MSDALANAVCQRCQARFSPAERIVNSNGELY
                                            10        20        30 

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
              40        50        60        70        80        90 

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
             100       110       120       130       140       150 

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
             160       170       180       190       200       210 

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
             220       230       240       250       260       270 

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
             280       290       300       310       320       330 

            
pF1KB6 DLNSA
       :::::
NP_001 DLNSA
            

>>NP_001180413 (OMIM: 602567) LIM and senescent cell ant  (362 aa)
 initn: 2165 init1: 2165 opt: 2204  Z-score: 1591.8  bits: 303.1 E(85289): 6.4e-82
Smith-Waterman score: 2204; 80.8% identity (92.5% similar) in 360 aa overlap (2-354:3-362)

                10        20               30        40        50  
pF1KB6  MAARLGALAASGLYRRRQHRQS-------PPPATGNMSDALANAVCQRCQARFSPAERI
         : .:  :. :::::::. : .       :    .::..:::.:.:.::.. :.:::.:
NP_001 MTALQLKELSHSGLYRRRRDRPDSLRVNGLPEEELSNMANALASATCERCKGGFAPAEKI
               10        20        30        40        50        60

             60        70        80        90       100       110  
pF1KB6 VNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVI
       ::::::::::.::::::::. ::::::::::::::::::::::::::: .::::::::::
NP_001 VNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVI
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB6 KAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVID
       :::::.::: ::::.::.  :::.::::::::::::::::::::.::::::::.:: .::
NP_001 KAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIID
              130       140       150       160       170       180

            180       190       200       210       220       230  
pF1KB6 EQPLMFRSDAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGR
       ::::.:..: ::::::::..:::::::.::::::::::::::::::::::::::::::::
NP_001 EQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGR
              190       200       210       220       230       240

            240       250       260       270       280       290  
pF1KB6 VVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDV
       ::::.:::::::::::::::::::::::::.::::::::::::::::::..:..::::::
NP_001 VVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDV
              250       260       270       280       290       300

            300       310       320       330       340       350  
pF1KB6 VSALNKAWCVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTS
       ::::::::::.::.:::::.::::::::::::::::::.::::::::::::::::.:  .
NP_001 VSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLG
              310       320       330       340       350       360

            360     
pF1KB6 RKAQPKATDLNSA
       ::           
NP_001 RK           
                    

>>NP_001180411 (OMIM: 602567) LIM and senescent cell ant  (329 aa)
 initn: 2161 init1: 2161 opt: 2161  Z-score: 1561.6  bits: 297.4 E(85289): 3.1e-80
Smith-Waterman score: 2161; 85.4% identity (96.6% similar) in 328 aa overlap (27-354:2-329)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
                                 : ::..:::.:.:.::.. :.:::.:::::::::
NP_001                          MTCNMANALASATCERCKGGFAPAEKIVNSNGELY
                                        10        20        30     

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::.::::::::. ::::::::::::::::::::::::::: .:::::::::::::::.::
NP_001 HEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWH
          40        50        60        70        80        90     

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       : ::::.::.  :::.::::::::::::::::::::.::::::::.:: .::::::.:..
NP_001 PECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKN
         100       110       120       130       140       150     

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       : ::::::::..:::::::.::::::::::::::::::::::::::::::::::::.:::
NP_001 DPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQ
         160       170       180       190       200       210     

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::.::::::::::::::::::..:..::::::::::::::
NP_001 WHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAW
         220       230       240       250       260       270     

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::.::.:::::.::::::::::::::::::.::::::::::::::::.:  .::      
NP_001 CVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK      
         280       290       300       310       320               

            
pF1KB6 DLNSA

>>NP_001180412 (OMIM: 602567) LIM and senescent cell ant  (337 aa)
 initn: 2159 init1: 2159 opt: 2159  Z-score: 1560.0  bits: 297.1 E(85289): 3.7e-80
Smith-Waterman score: 2159; 85.6% identity (96.9% similar) in 326 aa overlap (29-354:12-337)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
                                   ::..:::.:.:.::.. :.:::.:::::::::
NP_001                  MLGVAAGMTHSNMANALASATCERCKGGFAPAEKIVNSNGELY
                                10        20        30        40   

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::.::::::::. ::::::::::::::::::::::::::: .:::::::::::::::.::
NP_001 HEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWH
            50        60        70        80        90       100   

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       : ::::.::.  :::.::::::::::::::::::::.::::::::.:: .::::::.:..
NP_001 PECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKN
           110       120       130       140       150       160   

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       : ::::::::..:::::::.::::::::::::::::::::::::::::::::::::.:::
NP_001 DPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQ
           170       180       190       200       210       220   

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::.::::::::::::::::::..:..::::::::::::::
NP_001 WHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAW
           230       240       250       260       270       280   

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::.::.:::::.::::::::::::::::::.::::::::::::::::.:  .::      
NP_001 CVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK      
           290       300       310       320       330             

            
pF1KB6 DLNSA

>>NP_001180414 (OMIM: 602567) LIM and senescent cell ant  (387 aa)
 initn: 2159 init1: 2159 opt: 2159  Z-score: 1559.4  bits: 297.2 E(85289): 4e-80
Smith-Waterman score: 2159; 85.6% identity (96.9% similar) in 326 aa overlap (29-354:62-387)

                 10        20        30        40        50        
pF1KB6   MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGE
                                     ::..:::.:.:.::.. :.:::.:::::::
NP_001 TEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAEKIVNSNGE
              40        50        60        70        80        90 

       60        70        80        90       100       110        
pF1KB6 LYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNN
       ::::.::::::::. ::::::::::::::::::::::::::: .:::::::::::::::.
NP_001 LYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNS
             100       110       120       130       140       150 

      120       130       140       150       160       170        
pF1KB6 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMF
       ::: ::::.::.  :::.::::::::::::::::::::.::::::::.:: .::::::.:
NP_001 WHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIF
             160       170       180       190       200       210 

      180       190       200       210       220       230        
pF1KB6 RSDAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALG
       ..: ::::::::..:::::::.::::::::::::::::::::::::::::::::::::.:
NP_001 KNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMG
             220       230       240       250       260       270 

      240       250       260       270       280       290        
pF1KB6 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNK
       ::::::::::::::::::::::::.::::::::::::::::::..:..::::::::::::
NP_001 KQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNK
             280       290       300       310       320       330 

      300       310       320       330       340       350        
pF1KB6 AWCVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPK
       ::::.::.:::::.::::::::::::::::::.::::::::::::::::.:  .::    
NP_001 AWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK    
             340       350       360       370       380           

      360     
pF1KB6 ATDLNSA

>>NP_004978 (OMIM: 602567) LIM and senescent cell antige  (325 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1555.2  bits: 296.2 E(85289): 6.9e-80
Smith-Waterman score: 2152; 85.5% identity (96.9% similar) in 325 aa overlap (30-354:1-325)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
                                    :..:::.:.:.::.. :.:::.:::::::::
NP_004                              MANALASATCERCKGGFAPAEKIVNSNGELY
                                            10        20        30 

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::.::::::::. ::::::::::::::::::::::::::: .:::::::::::::::.::
NP_004 HEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWH
              40        50        60        70        80        90 

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       : ::::.::.  :::.::::::::::::::::::::.::::::::.:: .::::::.:..
NP_004 PECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKN
             100       110       120       130       140       150 

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       : ::::::::..:::::::.::::::::::::::::::::::::::::::::::::.:::
NP_004 DPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQ
             160       170       180       190       200       210 

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::.::::::::::::::::::..:..::::::::::::::
NP_004 WHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAW
             220       230       240       250       260       270 

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::.::.:::::.::::::::::::::::::.::::::::::::::::.:  .::      
NP_004 CVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK      
             280       290       300       310       320           

            
pF1KB6 DLNSA

>>NP_001180417 (OMIM: 602567) LIM and senescent cell ant  (325 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1555.2  bits: 296.2 E(85289): 6.9e-80
Smith-Waterman score: 2152; 85.5% identity (96.9% similar) in 325 aa overlap (30-354:1-325)

               10        20        30        40        50        60
pF1KB6 MAARLGALAASGLYRRRQHRQSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELY
                                    :..:::.:.:.::.. :.:::.:::::::::
NP_001                              MANALASATCERCKGGFAPAEKIVNSNGELY
                                            10        20        30 

               70        80        90       100       110       120
pF1KB6 HEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWH
       ::.::::::::. ::::::::::::::::::::::::::: .:::::::::::::::.::
NP_001 HEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWH
              40        50        60        70        80        90 

              130       140       150       160       170       180
pF1KB6 PGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRS
       : ::::.::.  :::.::::::::::::::::::::.::::::::.:: .::::::.:..
NP_001 PECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKN
             100       110       120       130       140       150 

              190       200       210       220       230       240
pF1KB6 DAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQ
       : ::::::::..:::::::.::::::::::::::::::::::::::::::::::::.:::
NP_001 DPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQ
             160       170       180       190       200       210 

              250       260       270       280       290       300
pF1KB6 WHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAW
       ::::::::::::::::::::::.::::::::::::::::::..:..::::::::::::::
NP_001 WHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAW
             220       230       240       250       260       270 

              310       320       330       340       350       360
pF1KB6 CVSCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKAT
       ::.::.:::::.::::::::::::::::::.::::::::::::::::.:  .::      
NP_001 CVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK      
             280       290       300       310       320           

            
pF1KB6 DLNSA




365 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:14:00 2016 done: Fri Nov  4 23:14:01 2016
 Total Scan time:  7.020 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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