GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:31:17

Sequence gi568815581f:38770190_39018775 : 248586 bp : 47.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -    350    247  104  0  2  139   84   126 0.995  17.19
 1.08 Intr -   1083    825  259  0  1   78  106   397 0.990  37.54
 1.07 Intr -   7611   7498  114  0  0  108   65   175 0.993  17.84
 1.06 Intr -   8183   8145   39  2  0  128   91    31 0.983   5.82
 1.05 Intr -   9340   9194  147  1  0  102   98   196 0.997  22.43
 1.04 Intr -  10415  10263  153  2  0   65   80   273 0.995  24.47
 1.03 Intr -  14150  14054   97  1  1   81   80   103 0.921   8.81
 1.02 Intr -  16731  16634   98  0  2  116   97   164 0.995  18.91
 1.01 Init -  29235  29077  159  0  0   70   43   236 0.688  17.43
 1.00 Prom -  29998  29959   40                              -4.46

 2.19 PlyA -  30286  30281    6                               1.05
 2.18 Term -  32017  31903  115  0  1   96   48    80 0.959   2.84
 2.17 Intr -  32672  32511  162  1  0   70   81   231 0.943  19.69
 2.16 Intr -  36206  36108   99  1  0   79  109    18 0.754   2.23
 2.15 Intr -  40406  40279  128  2  2   51   83   150 0.998  10.28
 2.14 Intr -  42675  42606   70  2  1   81  111    84 0.999   9.18
 2.13 Intr -  44908  44672  237  0  0   55   79   232 0.983  15.73
 2.12 Intr -  50884  50712  173  1  2   93  108   313 0.983  32.54
 2.11 Intr -  51043  50963   81  1  0   98   59    51 0.891   3.03
 2.10 Intr -  55329  55164  166  2  1   28   81   174 0.504  10.66
 2.09 Intr -  65157  65082   76  1  1  100   42    60 0.024   1.17
 2.08 Intr -  65304  65202  103  0  1   43   64    39 0.286  -3.25
 2.07 Intr -  71229  70994  236  1  2   47   80   256 0.428  18.11
 2.06 Intr -  80286  80173  114  1  0  129   97    87 0.997  14.12
 2.05 Intr -  82543  82415  129  2  0   77   96   154 0.999  15.77
 2.04 Intr -  82916  82833   84  0  0  109   94    15 0.932   3.99
 2.03 Intr -  83746  83606  141  2  0   47   66    76 0.417   1.62
 2.02 Intr -  84577  84541   37  1  1   38   75     4 0.404  -8.06
 2.01 Init -  85126  85073   54  1  0   85  101    82 0.614   8.87
 2.00 Prom -  87730  87691   40                              -8.76

 3.00 Prom +  88261  88300   40                              -8.16
 3.01 Init +  94583  94706  124  1  1   76   99    16 0.818   1.83
 3.02 Intr +  99187  99331  145  2  1   89   50   157 0.988  11.34
 3.03 Intr +  99847 100069  223  1  1   80  105   148 0.956  13.83
 3.04 Intr + 107897 107991   95  1  2   94   77   211 0.879  19.36
 3.05 Intr + 117335 117532  198  2  0   68  100    82 0.756   5.87
 3.06 Intr + 120231 120315   85  0  1  125   94   104 0.997  14.52
 3.07 Intr + 122879 123079  201  1  0   74    0   155 0.291   4.78
 3.08 Intr + 128223 128330  108  2  0  153   66   199 0.913  24.68
 3.09 Intr + 138548 138601   54  1  0  106   37    48 0.217   0.68
 3.10 Intr + 144136 144286  151  0  1  100  100   256 0.998  27.74
 3.11 Intr + 144854 144957  104  0  2   78   84   157 0.984  14.19
 3.12 Intr + 148322 148369   48  1  0   86   99    17 0.574   1.48
 3.13 Term + 148416 148589  174  2  0   77   46   573 0.995  49.76
 3.14 PlyA + 151555 151560    6                               1.05

 4.07 PlyA - 154340 154335    6                               1.05
 4.06 Term - 155605 155451  155  2  2   41   53   137 0.257   3.58
 4.05 Intr - 168543 168384  160  0  1   36  105    69 0.838   2.96
 4.04 Intr - 172731 172589  143  1  2   47  111    12 0.506  -0.53
 4.03 Intr - 173547 173401  147  1  0   79   98    82 0.979   8.51
 4.02 Intr - 181500 181392  109  0  1   84   98    61 0.908   6.56
 4.01 Init - 182506 182501    6  1  0   71   81     0 0.538  -1.35
 4.00 Prom - 201889 201850   40                              -3.06

 5.00 Prom + 206639 206678   40                              -1.76
 5.01 Init + 211316 211410   95  1  2   97   48    17 0.097  -1.55
 5.02 Intr + 226105 226303  199  1  1   48   72   118 0.179   5.55
 5.03 Term + 233403 233501   99  2  0   81   42    71 0.540  -0.07
 5.04 PlyA + 234226 234231    6                               1.05

 6.02 PlyA - 234239 234234    6                               1.05
 6.01 Term - 242840 242766   75  2  0   83   49   117 0.599   5.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:38770190_39018775|GENSCAN_predicted_peptide_1|390_aa
MSSNCTSTTAVAVAPLSASKTKTKKKHFVCQKVKLFRASEPILSVLMWGVNHTINELSNV
PVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNS
VTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLL
PQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD
NDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEE
RAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKK
EVYFMAIIDILTPYDTKKKAAHAAKTVKHG

>gi568815581f:38770190_39018775|GENSCAN_predicted_CDS_1|1170_bp
atgtcgtccaactgcaccagcaccacggcggtggcggtggcgccgctcagcgccagcaag
accaagaccaagaagaagcatttcgtgtgccagaaagtgaagctattccgggccagcgag
ccgatcctcagcgtcctgatgtggggggtgaaccacacgatcaatgagctgagcaatgtt
cctgttcctgtcatgctaatgccagatgacttcaaagcctacagcaagatcaaggtggac
aatcatctcttcaataaggagaacctgcccagccgctttaagtttaaggagtattgcccc
atggtgttccgaaaccttcgggagaggtttggaattgatgatcaggattaccagaattca
gtgacgcgcagcgcccccatcaacagtgacagccagggtcggtgtggcacgcgtttcctc
accacctacgaccggcgctttgtcatcaagactgtgtccagcgaggacgtggcggagatg
cacaacatcttaaagaaataccaccagtttatagtggagtgtcatggcaacacgcttttg
ccacagttcctgggcatgtaccgcctgaccgtggatggtgtggaaacctacatggtggtt
accaggaacgtgttcagccatcggctcactgtgcatcgcaagtatgacctcaagggttct
acggttgccagagaagcgagcgacaaggagaaggccaaggacttgccaacattcaaagac
aatgacttcctcaatgaagggcagaagctgcatgtgggagaggagagtaaaaagaacttc
ctggagaaactgaagcgggacgttgagttcttggcacagctgaagatcatggactacagc
ctgctggtgggcatccacgacgtggaccgggcagagcaggaggagatggaggtggaggag
cgggcagaggacgaggagtgtgagaatgatggggtgggtggcaacctactctgctcctat
ggcacacctccggacagccctggcaacctcctcagctttcctcggttctttggtcctggg
gaattcgacccctctgttgacgtctatgccatgaaaagccatgaaagttcccccaagaag
gaggtgtatttcatggccatcattgatatcctcacgccatacgatacaaagaagaaagct
gcacatgctgccaaaacggtgaaacacggg

>gi568815581f:38770190_39018775|GENSCAN_predicted_peptide_2|734_aa
MAAARLPERLVPRRGRTACLISSSTCTPAESRREDTSYLLRFYLNSHFAERAKSDVVNLL
RNKAAPRGGRGRFLLRPRRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKG
RLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVN
NKGEMKERPSEATVVGMAYLSECRLRLEKGFILDGVAVSTAARAYGRSRPKLWSAIPPYN
AQQDYHARSYFQSHVVPPLLRKTDQSLRTLVDCVFSMGNASDYAWLASHTTPRGMGKPRG
HSLQQVTGHDHYNADLKPIDGFNGRESGTSGNVATRSSQNETSTAKASTAEPGPLQNLQV
TPTSQSATEPCTSSFRDADAMCERLLEENLAIVEDILPSHACLGYGRNLKKSWHPQTLRN
VEKVWKAEQKHEAERKKIEELQRELREERAREEMQRYAEDVGAVKKKEEKLDWMYQGPGG
MVNRDEYLLGRPIDKYVFEKMEEKEAGCSSETGLLPGSIFAPSGANSLLDMASKIREDPL
FIIRKKEEEKKREVLNNPVKMKKIKELLQMSLEKKEKKKKKEKKKKHKKHKHRSSSSDRS
SSEDEHSAGRHNSKVNRRETGQTRSPSPKKEVYQRRHAPGYTRKLSAEELERKRQEMMEN
AKWREEERLNILKRHAKDEEREQRLEKLDSRDGKFIHRMKLESASTSSLEDRVKRNIYSL
QRTSVALEKNFMKR

>gi568815581f:38770190_39018775|GENSCAN_predicted_CDS_2|2205_bp
atggctgctgcgcggcttcctgagcgactggttcctcggcgagggcgaacagcgtgtcta
atatcctcctccacctgcaccccagcagaatctcgtagagaagatacttcctatctcttg
cgcttctacctcaactcccacttcgcagagagggctaaaagcgacgtcgtaaacttatta
cgtaataaggcagcgcccagaggcggaagaggccggtttttgctccggccacgacgtggt
gggtcctctggtgcgaaattccggatttccttgggtcttccggtaggagctgtaatcaat
tgtgctgacaacacaggagccaaaaacctgtatatcatctccgtgaaggggatcaaggga
cggctgaacagacttcccgctgctggtgtgggtgacatggtgatggccacagtcaagaaa
ggcaaaccagagctcagaaaaaaggtacatccagcagtggtcattcgacaacgaaagtca
taccgtagaaaagatggcgtgtttctttattttgaagataatgcaggagtcatagtgaac
aataaaggcgagatgaaagaaaggccctccgaggctacggtggttgggatggcgtacctg
agcgagtgtcgcctgcgactggagaaaggctttatcttggacggggtggctgtgagcacc
gctgcccgcgcttatgggcgctctaggcccaagctgtggtcggcgattccgccctacaac
gcgcagcaggactaccacgcccgcagctacttccagagtcacgtggttccgccccttttg
cggaaaactgatcagagtctcaggacacttgtggattgcgtgttcagcatggggaatgca
agtgactacgcctggttggcatcccataccacacccaggggaatggggaagccaagaggg
cattctctccagcaggtgactgggcatgaccactacaatgctgatctgaaaccgatcgat
gggttcaatggaagagagtctgggacatcaggcaacgtggcgacccgaagcagccaaaat
gagacctcgacagcaaaggcctcgacagcggagcccggacctttgcaaaatctgcaagta
acgccaacgtcacaaagcgcgaccgagccctgtacgtcatcgttccgcgacgccgacgcg
atgtgtgagagattattggaagaaaaccttgccattgttgaagacatcttgccctcacac
gcctgccttgggtatggaaggaatctgaagaagagctggcacccgcagaccctcaggaat
gtggagaaagtgtggaaggccgagcagaagcatgaggctgagcggaagaagattgaggag
cttcagcgggagctgcgagaagagagagcccgggaagagatgcagcgctatgcggaggat
gttggggccgtcaagaaaaaagaagaaaagttggactggatgtaccagggtcctggtggg
atggtgaaccgtgacgagtacctgctggggcgccccattgacaaatatgtttttgagaag
atggaggagaaggaggcaggctgctcttctgaaacaggacttctcccaggctctatcttt
gccccatcaggtgccaattcccttcttgacatggccagcaagatccgggaggacccactc
ttcatcatcaggaagaaggaggaggagaaaaaacgagaggtattaaataatccagtgaaa
atgaagaaaatcaaagaattgttgcaaatgagtctggaaaaaaaggagaagaagaaaaag
aaggagaagaaaaagaagcacaagaaacataagcacagaagctcgagtagtgatcgttcc
agcagcgaggatgagcacagtgcagggaggcacaactctaaggtgaacaggagagagaca
ggccaaactaggagcccatcacctaaaaaagaggtctaccaaaggcgacatgctcccgga
tacaccagaaaactctctgcagaggaattagagcgaaaacggcaagagatgatggaaaac
gccaaatggagggaggaggagagactgaacatcctcaagaggcatgctaaggatgaggaa
cgggagcagaggctagagaagctggactcccgggatgggaagttcatccaccgcatgaag
ctggagagtgcatctacttcctccctggaggatcgggtgaagcggaatatctactcttta
cagagaacttcggtagctctggagaagaactttatgaaaagatga

>gi568815581f:38770190_39018775|GENSCAN_predicted_peptide_3|569_aa
MSTSQSPCESICDYVTSHDKSNFTDMIKLNILRCEVILDYPAPGGGSLGAKHCCSCYTVS
SGVTEGERNAGEKGVKLNADGARIRGTPGRGRRAEAEASSPAPAAVAAACVVAAAAASRQ
LASGNRTRVSSGVPAPAFLGTMNPNCARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTL
NMKNYKGYEKKPYCNAPRLLPAADTCVCLSSSSLPLLEELRVWADLGGQDPGEGWGTGTA
RIIWIRDSETGPREKGFAKVTQHYPKQSFTMVADTPENLRLKQQSELQSQPPDERGALII
PIIQIGKLRFTEAALLVQSPGTGADIKSHDLALEPVALNSADGTGTEPCAPTLQDAPVRY
KEEFEKNKGKGFSVVADTPELQRIKKTQDQISNPGLQELLAVQPAGAATMQIKYHEEFEK
SRMGPSGGEGMEPERRDSQDGSSYRRPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKE
PAAPVSIQRSAPGGGGALLQGRGELEKNAQTQKRYRAVYDYSAADEDEVSFQDGDTIVNV
QQIDDGWMYGTVERTGDTGMLPANYVEAI

>gi568815581f:38770190_39018775|GENSCAN_predicted_CDS_3|1710_bp
atgtctacatcccagtctccttgtgaatctatttgtgactatgttacctctcatgataaa
agcaactttacagatatgattaaattaaatatcttgagatgtgaggttatcctggattat
ccagcgcctggaggcggctccttgggtgctaagcattgttgcagctgctacactgtgagt
agtggtgtaacagaaggagaaaggaatgctggagaaaaaggggtcaagctgaacgcagac
ggtgcccgcatccggggaaccccgggaaggggaaggagggcggaggcggaggccagttcc
ccagctccagccgccgtcgctgctgcctgtgtagttgcagccgcggccgcctcccgccag
ctcgcctcggggaacaggacgcgcgtgagctcaggcgtccccgccccagcttttctcgga
accatgaaccccaactgcgcccggtgcggcaagatcgtgtatcccacggagaaggtgaac
tgtctggataagttctggcataaagcatgcttccattgcgagacctgcaagatgacactg
aacatgaagaactacaagggctacgagaagaagccctactgcaacgcgccacgtctgttg
ccagctgcggacacctgtgtttgcctttcctcatcttcccttcctctgctggaggaactg
cgagtctgggctgacctgggtggccaggacccaggtgagggctgggggacgggcaccgct
aggatcatctggatccgggacagtgaaactggcccaagggaaaaaggatttgccaaggtc
acccaacactaccccaagcagtccttcaccatggtggcggacaccccggaaaaccttcgc
ctcaagcaacagagtgagctccagagtcagccacctgatgaaagaggggctcttattatc
cccatcatacagatagggaaactgaggtttacagaggctgccctgcttgtgcagagccca
gggacaggggcagacatcaagtcccatgacctggccctggagcccgttgctctgaacagt
gctgatggcacaggcaccgagccctgtgctcccaccctgcaggatgcaccagtgcgctac
aaggaggagtttgagaagaacaagggcaaaggtttcagcgtagtggcagacacgcccgag
ctccagagaatcaagaagacccaggaccagatcagtaaccccgggctgcaggaactattg
gctgttcagccagcaggagcagcaaccatgcagataaaataccatgaggagtttgagaag
agccgcatgggccctagcgggggcgagggcatggagccagagcgtcgggattcacaggac
ggcagcagctaccggcggcccctggagcagcagcagcctcaccacatcccgaccagtgcc
ccggtttaccagcagccccagcagcagccggtggcccagtcctatggtggctacaaggag
cctgcagccccagtctccatacagcgcagcgccccaggtggtggcggggctctgctccag
ggtcgtggagagttagaaaaaaatgctcagacccagaagcggtaccgcgcggtgtatgac
tacagcgccgccgacgaggacgaggtctccttccaggacggggacaccatcgtcaacgtg
cagcagatcgacgacggctggatgtacgggacggtggagcgcaccggcgacacggggatg
ctgccggccaactacgtggaggccatctga

>gi568815581f:38770190_39018775|GENSCAN_predicted_peptide_4|239_aa
MVTLTAGWDELECHRVYNFLCELTNLCRKIQMAVCSKPGQVVWQEMIEEPTDEFSLKGLA
DAIKLLYDASTKEWTADDVISLVDELSVVPREWLLENNARLLMLSGNNICFSFMASKAVN
GRTIELARLVVFLALVCEKELYCMDWTVKMMQKVCKVFSTPVERKNFLQNVANAFACVIM
EMLQSIMSGSGRSSRPLEQIDNVGQNDQAYDGKEHQDENIQHCGFLGRPSPWILVNREL

>gi568815581f:38770190_39018775|GENSCAN_predicted_CDS_4|720_bp
atggttaccttaacagcaggttgggatgaacttgagtgccatcgcgtttataatttctta
tgcgaactgactaatctctgccgcaagatacaaatggctgtctgcagcaaaccaggacag
gtggtttggcaggaaatgatagaagaacctacagatgaattcagtctgaaaggtttggct
gatgccattaagttactatatgacgctagcactaaagagtggacagcagatgatgttatc
agtcttgtagatgaactatcagtggttccccgtgagtggcttctagagaataatgcacgt
ctcctaatgctaagtggaaacaacatctgtttcagtttcatggctagtaaagctgtgaat
ggacgcaccattgaactggcaaggctcgtagtctttttggctttggtgtgtgagaaagaa
ctgtactgcatggattggacagttaaaatgatgcaaaaagtctgcaaagtctttagcact
ccagtggaaagaaagaacttcctgcagaatgtggcaaatgcatttgcatgtgttataatg
gaaatgctgcaatcaattatgtctggctccggccgcagctccaggccactagagcagata
gataatgtaggacagaatgaccaggcctatgatggcaaagaacatcaggatgaaaatatc
cagcattgtggattcctaggccgaccaagcccctggattctggtgaaccgtgagctgtga

>gi568815581f:38770190_39018775|GENSCAN_predicted_peptide_5|130_aa
MAPACKFKLQCDTLTTLNAEGCGATGTLIHCWFHYAQTEEELSPCGSCFPNEDWGPAQSF
PLPLAEDVCPHPFLDECEGQISRGYLEQLRGQVAGLFQDCHQALFADVFPDCRLALSSFL
SCRSMYPAAG

>gi568815581f:38770190_39018775|GENSCAN_predicted_CDS_5|393_bp
atggcgcctgcctgcaaatttaaactacaatgtgatacactgacaacactaaatgctgaa
ggatgtggagcaacaggaaccctcattcattgctggtttcattatgcacagacagaggag
gagctcagtccttgtggcagctgctttcctaatgaagactggggccctgctcagtccttc
ccactccctcttgctgaggatgtatgtccccacccttttcttgatgaatgtgagggccag
atctcccgtggatatttggaacagctccgcgggcaagttgctggcttgtttcaggactgc
catcaggccctctttgcagatgtcttcccagactgccgtttagcactgagctcctttctg
agctgtcggtccatgtatccagctgctggctag

>gi568815581f:38770190_39018775|GENSCAN_predicted_peptide_6|24_aa
VRKPWFKAEITNCWTTDLHEFTAC

>gi568815581f:38770190_39018775|GENSCAN_predicted_CDS_6|75_bp
gtgaggaagccatggtttaaagcagagatcaccaactgctggaccacagacctgcacgag
ttcacggcctgttag