Result of FASTA (ccds) for pF1KB8289
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8289, 302 aa
  1>>>pF1KB8289 302 - 302 aa - 302 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.2671+/-0.0011; mu= 1.2375+/- 0.064
 mean_var=270.7623+/-63.763, 0's: 0 Z-trim(111.5): 725  B-trim: 494 in 1/51
 Lambda= 0.077944
 statistics sampled from 11550 (12449) to 11550 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.382), width:  16
 Scan time:  2.820

The best scores are:                                      opt bits E(32554)
CCDS2373.1 KLF7 gene_id:8609|Hs108|chr2            ( 302) 2026 241.1   8e-64
CCDS59438.1 KLF7 gene_id:8609|Hs108|chr2           ( 274) 1806 216.3 2.1e-56
CCDS59440.1 KLF7 gene_id:8609|Hs108|chr2           ( 269) 1802 215.8 2.8e-56
CCDS59439.1 KLF7 gene_id:8609|Hs108|chr2           ( 230) 1140 141.3 6.6e-34
CCDS7060.1 KLF6 gene_id:1316|Hs108|chr10           ( 283)  703 92.3 4.7e-19
CCDS9449.1 KLF12 gene_id:11278|Hs108|chr13         ( 402)  567 77.2 2.4e-14
CCDS66562.1 KLF5 gene_id:688|Hs108|chr13           ( 366)  559 76.2 4.1e-14
CCDS3444.1 KLF3 gene_id:51274|Hs108|chr4           ( 345)  558 76.1 4.3e-14
CCDS9448.1 KLF5 gene_id:688|Hs108|chr13            ( 457)  559 76.3 4.8e-14
CCDS14373.1 KLF8 gene_id:11279|Hs108|chrX          ( 359)  537 73.7 2.3e-13
CCDS12343.1 KLF2 gene_id:10365|Hs108|chr19         ( 355)  525 72.4 5.7e-13
CCDS6770.2 KLF4 gene_id:9314|Hs108|chr9            ( 479)  524 72.4 7.5e-13
CCDS12285.1 KLF1 gene_id:10661|Hs108|chr19         ( 362)  510 70.7 1.9e-12
CCDS3036.1 KLF15 gene_id:28999|Hs108|chr3          ( 416)  494 69.0 7.1e-12


>>CCDS2373.1 KLF7 gene_id:8609|Hs108|chr2                 (302 aa)
 initn: 2026 init1: 2026 opt: 2026  Z-score: 1259.3  bits: 241.1 E(32554): 8e-64
Smith-Waterman score: 2026; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302)

               10        20        30        40        50        60
pF1KB8 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISETFGEDLDC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISETFGEDLDC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 FLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 FLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 SYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 SYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 VATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 RTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 RTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKR
              250       260       270       280       290       300

         
pF1KB8 HI
       ::
CCDS23 HI
         

>>CCDS59438.1 KLF7 gene_id:8609|Hs108|chr2                (274 aa)
 initn: 1802 init1: 1802 opt: 1806  Z-score: 1126.1  bits: 216.3 E(32554): 2.1e-56
Smith-Waterman score: 1806; 98.9% identity (99.3% similar) in 272 aa overlap (31-302:4-274)

               10        20        30        40        50        60
pF1KB8 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISETFGEDLDC
                                     .:  ::::::::::::::::::::::::::
CCDS59                            MFPSWP-TCLELERYLQTEPRRISETFGEDLDC
                                           10        20        30  

               70        80        90       100       110       120
pF1KB8 FLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLD
             40        50        60        70        80        90  

              130       140       150       160       170       180
pF1KB8 SYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGG
            100       110       120       130       140       150  

              190       200       210       220       230       240
pF1KB8 VATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQ
            160       170       180       190       200       210  

              250       260       270       280       290       300
pF1KB8 RTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKR
            220       230       240       250       260       270  

         
pF1KB8 HI
       ::
CCDS59 HI
         

>>CCDS59440.1 KLF7 gene_id:8609|Hs108|chr2                (269 aa)
 initn: 1802 init1: 1802 opt: 1802  Z-score: 1123.8  bits: 215.8 E(32554): 2.8e-56
Smith-Waterman score: 1802; 100.0% identity (100.0% similar) in 268 aa overlap (35-302:2-269)

           10        20        30        40        50        60    
pF1KB8 ASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISETFGEDLDCFLHA
                                     ::::::::::::::::::::::::::::::
CCDS59                              MTCLELERYLQTEPRRISETFGEDLDCFLHA
                                            10        20        30 

           70        80        90       100       110       120    
pF1KB8 SPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLDSYTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLDSYTA
              40        50        60        70        80        90 

          130       140       150       160       170       180    
pF1KB8 VNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGGVATA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGGVATA
             100       110       120       130       140       150 

          190       200       210       220       230       240    
pF1KB8 AAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHT
             160       170       180       190       200       210 

          250       260       270       280       290       300  
pF1KB8 GEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRHI
             220       230       240       250       260         

>>CCDS59439.1 KLF7 gene_id:8609|Hs108|chr2                (230 aa)
 initn: 1158 init1: 1136 opt: 1140  Z-score: 722.2  bits: 141.3 E(32554): 6.6e-34
Smith-Waterman score: 1140; 86.0% identity (91.6% similar) in 214 aa overlap (1-214:1-213)

               10        20        30        40        50        60
pF1KB8 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISETFGEDLDC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISETFGEDLDC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 FLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 SYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: .
CCDS59 SYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVRS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQ
       . .: .   ..:... ..:.    :      : :                          
CCDS59 LISAHGR-DVSGVLHEAMSSRGTTGNTQVQSPSNATTATGVFPGLTILPST         
               190       200       210       220       230         

              250       260       270       280       290       300
pF1KB8 RTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKR

>>CCDS7060.1 KLF6 gene_id:1316|Hs108|chr10                (283 aa)
 initn: 1099 init1: 661 opt: 703  Z-score: 455.6  bits: 92.3 E(32554): 4.7e-19
Smith-Waterman score: 930; 51.0% identity (66.0% similar) in 312 aa overlap (1-302:1-283)

               10        20        30        40        50          
pF1KB8 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISET---FGED
       ::::   :::::::.::.:::::::::::: :::::::::::::.::  .: .   :  .
CCDS70 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ
               10        20        30        40        50        60

        60         70              80        90       100       110
pF1KB8 LDCFLHAS-PPPCIEESFRRL------DPLLLPVEAAICEKSSAVDILLSRDKLLSETCL
        : . .        :::  ..      : :. :      : .:  . . :...  ::   
CCDS70 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS
               70        80        90       100       110       120

              120       130       140       150       160       170
pF1KB8 SLQPASSSLDSYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGTVTLKLVAKK
            .:.  . . :....:.. .. ::::::::::   . ::  . : : .        
CCDS70 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSR---EPSQLWGCVPGEL--------
              130       140       150          160                 

              180       190       200       210       220       230
pF1KB8 AALSSVKVGGVATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVY
                          . : :.:: : .     ...: :....:::::.::::::::
CCDS70 ------------------PSPGKVRSGTSGKPGDKGNGDASPDGRRRVHRCHFNGCRKVY
                       170       180       190       200       210 

              240       250       260       270       280       290
pF1KB8 TKSSHLKAHQRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSR
       :::::::::::::::::::.:::::::::::::::::::.:::::::::::.::::::::
CCDS70 TKSSHLKAHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFSR
             220       230       240       250       260       270 

              300  
pF1KB8 SDHLALHMKRHI
       :::::::::::.
CCDS70 SDHLALHMKRHL
             280   

>>CCDS9449.1 KLF12 gene_id:11278|Hs108|chr13              (402 aa)
 initn: 691 init1: 546 opt: 567  Z-score: 371.2  bits: 77.2 E(32554): 2.4e-14
Smith-Waterman score: 567; 79.3% identity (92.4% similar) in 92 aa overlap (212-302:309-400)

             190       200       210        220       230       240
pF1KB8 ATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKR-VHRCQFNGCRKVYTKSSHLKAHQ
                                     :...:: .:::.:.:: ::::::::::::.
CCDS94 RGNRMNNQKFPCSISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHR
      280       290       300       310       320       330        

              250       260       270       280       290       300
pF1KB8 RTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKR
       :::::::::::.:::: :.::::::::::::::::.:::::  ::: :::::::::: .:
CCDS94 RTHTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRR
      340       350       360       370       380       390        

           
pF1KB8 HI  
       :.  
CCDS94 HMLV
      400  

>>CCDS66562.1 KLF5 gene_id:688|Hs108|chr13                (366 aa)
 initn: 579 init1: 559 opt: 559  Z-score: 366.8  bits: 76.2 E(32554): 4.1e-14
Smith-Waterman score: 559; 82.8% identity (93.1% similar) in 87 aa overlap (215-301:278-364)

          190       200       210       220       230       240    
pF1KB8 AAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHT
                                     :.:.: :.. :: :::::::::::: ::::
CCDS66 HNPNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT
       250       260       270       280       290       300       

          250       260       270       280       290       300   
pF1KB8 GEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRHI 
       :::::::.::::.::::::::::::::::::::::.:. :.: ::::::::::::::  
CCDS66 GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
       310       320       330       340       350       360      

>>CCDS3444.1 KLF3 gene_id:51274|Hs108|chr4                (345 aa)
 initn: 678 init1: 537 opt: 558  Z-score: 366.5  bits: 76.1 E(32554): 4.3e-14
Smith-Waterman score: 558; 77.8% identity (91.1% similar) in 90 aa overlap (213-302:254-343)

            190       200       210       220       230       240  
pF1KB8 TAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRT
                                     . :.:.:::...:: ::::::::::::.::
CCDS34 SPPQALLQENHPSVIVQPGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRT
           230       240       250       260       270       280   

            250       260       270       280       290       300  
pF1KB8 HTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRHI
       :::::::::.:::: :.::::::::::.::::: :::.:  ::: :::::::::: :::.
CCDS34 HTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHM
           290       300       310       320       330       340   

CCDS34 LV
         

>>CCDS9448.1 KLF5 gene_id:688|Hs108|chr13                 (457 aa)
 initn: 559 init1: 559 opt: 559  Z-score: 365.7  bits: 76.3 E(32554): 4.8e-14
Smith-Waterman score: 559; 82.8% identity (93.1% similar) in 87 aa overlap (215-301:369-455)

          190       200       210       220       230       240    
pF1KB8 AAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHT
                                     :.:.: :.. :: :::::::::::: ::::
CCDS94 HNPNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT
      340       350       360       370       380       390        

          250       260       270       280       290       300   
pF1KB8 GEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRHI 
       :::::::.::::.::::::::::::::::::::::.:. :.: ::::::::::::::  
CCDS94 GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
      400       410       420       430       440       450       

>>CCDS14373.1 KLF8 gene_id:11279|Hs108|chrX               (359 aa)
 initn: 570 init1: 527 opt: 537  Z-score: 353.5  bits: 73.7 E(32554): 2.3e-13
Smith-Waterman score: 537; 41.1% identity (69.0% similar) in 197 aa overlap (110-301:166-356)

      80        90       100       110       120       130         
pF1KB8 LLLPVEAAICEKSSAVDILLSRDKLLSETCLSLQPASSSLDSYTAVNQAQLNAVTSLTPP
                                     .::    ..: .  .: :.   . :.:   
CCDS14 PTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPAD
         140       150       160       170       180       190     

     140       150       160       170       180       190         
pF1KB8 SSPELSRHLVKTSQTLSAVDGTVTLKLVAKKAALSSVKVGGVATAAAAVTAAGAVKSGQS
       ..:      .  .  : . ::  . .. .  ...: ... . .  ..  ....:..: :.
CCDS14 GGP------AAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESGSSALQSLQG
               200       210       220       230       240         

     200            210       220       230       240       250    
pF1KB8 DSDQGGL-----GAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHTGEKPYKCSWE
        ... .      : :.   ...:.:.:.: :: ::::::::::::.: :::::::::.:.
CCDS14 LQQEPAAMAQMQGEESLDLKRRRIHQCDFAGCSKVYTKSSHLKAHRRIHTGEKPYKCTWD
     250       260       270       280       290       300         

          260       270       280       290       300    
pF1KB8 GCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCFSRSDHLALHMKRHI  
       :: :.::::::::::.::::: :::.:. :.: :::::::.:: .::   
CCDS14 GCSWKFARSDELTRHFRKHTGIKPFRCTDCNRSFSRSDHLSLHRRRHDTM
     310       320       330       340       350         




302 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:03:26 2016 done: Fri Nov  4 22:03:27 2016
 Total Scan time:  2.820 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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