GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:03:13

Sequence gi568815597f:63425573_63672513 : 246941 bp : 38.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  11251  11343   93  2  0  119   62   150 0.173  14.52
 1.02 Intr +  19996  20016   21  2  0   89  107    21 0.043   0.70
 1.03 Term +  56283  56344   62  1  2   97   55    40 0.051  -1.41
 1.04 PlyA +  56998  57003    6                               1.05

 2.03 PlyA -  57421  57416    6                               1.05
 2.02 Term -  76610  76408  203  0  2   64   44   126 0.500   2.37
 2.01 Init -  77249  77171   79  2  1   83   47    46 0.462   1.27
 2.00 Prom -  77426  77387   40                              -3.65

 3.03 PlyA -  78188  78183    6                               1.05
 3.02 Term -  80014  79140  875  2  2   13   42   409 0.669  20.58
 3.01 Init -  92893  92848   46  1  1   63   75    66 0.341   3.70
 3.00 Prom -  93976  93937   40                              -8.45

 4.00 Prom +  94305  94344   40                              -7.25
 4.01 Init +  97046  97141   96  1  0   77   70    42 0.466   1.66
 4.02 Intr +  97295  97406  112  1  1   -7   43   131 0.468  -1.87
 4.03 Term +  97516  97655  140  2  2  100   48   168 0.934  11.14
 4.04 PlyA +  98525  98530    6                               1.05

 5.00 Prom +  99379  99418   40                             -10.35
 5.01 Init + 100001 100187  187  1  1   53   67   126 0.971   6.27
 5.02 Intr + 106248 106459  212  1  2   52  116    91 0.984   6.01
 5.03 Intr + 107098 107184   87  0  0  102   83   133 0.995  13.45
 5.04 Intr + 107882 108077  196  1  1   86   63   109 0.857   6.27
 5.05 Intr + 131556 131675  120  1  0   35   99   103 0.787   5.65
 5.06 Intr + 136137 136285  149  1  2   37   88   173 0.975  11.23
 5.07 Intr + 142738 142947  210  0  0   62   64   187 0.953  11.89
 5.08 Term + 144937 144948   12  0  0  104   49     0 0.250  -5.07
 5.09 PlyA + 145017 145022    6                               1.05

 6.03 PlyA - 145380 145375    6                               1.05
 6.02 Term - 149260 148950  311  2  2   60   37   176 0.158   3.94
 6.01 Init - 159927 159918   10  0  1   51  116    -3 0.039  -0.54
 6.00 Prom - 163113 163074   40                              -1.15

 7.00 Prom + 166146 166185   40                              -4.45
 7.01 Init + 167917 168162  246  0  0  117   74   347 0.878  33.84
 7.02 Intr + 168641 168719   79  1  1   68   52   102 0.271   2.81
 7.03 Term + 178337 178569  233  0  2   38   48   123 0.034  -1.05
 7.04 PlyA + 180768 180773    6                               1.05

 8.03 PlyA - 181394 181389    6                               1.05
 8.02 Term - 185609 185382  228  2  0  138   41    90 0.704   4.95
 8.01 Init - 189194 189156   39  2  0   76   76    34 0.332   1.24
 8.00 Prom - 190690 190651   40                              -1.85

 9.00 Prom + 196125 196164   40                              -5.05
 9.01 Init + 197889 198188  300  2  0   51   47   250 0.795  14.50
 9.02 Intr + 203853 204042  190  2  1   68  111   182 0.841  16.74
 9.03 Intr + 204370 204618  249  2  0  105   75   108 0.987   7.69
 9.04 Intr + 206085 206210  126  1  0   80   59   144 0.999  10.43
 9.05 Intr + 209257 209447  191  2  2   28   47   238 0.860  12.08
 9.06 Intr + 210662 210816  155  1  2   97   94   204 0.737  19.85
 9.07 Intr + 222895 223080  186  1  0    1   99   211 0.291  11.38
 9.08 Intr + 226061 226302  242  2  2   47   41   361 0.309  23.57
 9.09 Intr + 226464 226685  222  1  0   46  103    99 0.348   4.38
 9.10 Intr + 227863 227936   74  2  2   44   57    87 0.498  -0.59
 9.11 Intr + 228760 228894  135  0  0   65   97   214 0.833  19.84
 9.12 Term + 232522 232641  120  0  0   72   48    59 0.428  -2.21
 9.13 PlyA + 234652 234657    6                               1.05

10.04 PlyA - 234852 234847    6                               1.05
10.03 Term - 236604 236292  313  2  1   34   43   174 0.731   0.99
10.02 Intr - 237903 237499  405  2  0   42   73   177 0.376   4.14
10.01 Init - 240566 240277  290  2  2   87   -4   235 0.448  10.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_1|58_aa
XSYLSHHYGASDVDDCHTGSSSETTGLVFCIEIAGKTPDEKIEVQNGYKLIPAHKVSE

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_1|177_bp
ntttcttatctcagtcatcactatggtgcttctgacgttgatgactgtcacactggatcc
tcctcagaaactaccggacttgttttctgtattgagatagcaggcaaaacacctgatgag
aaaatagaagtacagaatggttacaaacttatcccagcccataaagttagtgagtga

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_2|93_aa
MDEAGNHHSQQISQGQKTKHRVFSLVGRFSGMKMNYILQTVADGSPDEFIWTTGYLAIYQ
ASLTQSFSGHFRERIEDATVGKRRAYFLPRPAQ

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_2|282_bp
atggatgaagctggaaaccatcattctcagcaaatatcgcaaggacaaaaaaccaaacac
cgcgtgttctcactcgtaggtagattttcaggaatgaagatgaattatatattacaaact
gttgccgatggcagtccagatgaatttatatggacaactggctacctggccatataccaa
gccagcttgacccagtctttttcaggacacttcagagagagaatagaagatgctacggtt
gggaagagaagagcatacttcttaccaaggccagctcaatag

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_3|306_aa
MKEQNTTKDAIDIERELEKQEQTHSKASRRQEIPKIRAELKEIETQKTLQKINESSSWFF
EKINKIDGLLARLIKKKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLE
EMDKFLDTYTLPRLNQEEFEPPNRPITGCEIEAIIISLPTKKSPGPDGFTAEFYQRYKEE
LVPFLLKLFQSIEKEGILPDAFYEPSIILIPKPGRDTAKKENFRPISLMNIDAKILNKIL
ANRIQQHIKKLIHHDQVGLIPGMQGWFNICKSINVIQHINRTNDKNHMIISIDVEKAFDK
IQQPSC

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_3|921_bp
atgaaagagcagaataccactaaagatgctatagatattgaaagagaactagagaagcaa
gagcaaacacattcaaaagctagcagaaggcaagaaatacctaagatcagagcagaactg
aaggaaatagagacacaaaaaacccttcaaaaaatcaatgaatccagtagctggtttttt
gagaagatcaacaaaattgatggactgctagcaagactaataaagaagaaaagagagaag
aatcaaatagatgcaataaaaaatgataaaggggatatcaccaccgatcccacagaaata
caaactaccatcagagaatactataaacacctctacgcaaataaactagaaaatctagaa
gaaatggataaattcctcgacacatacaccctcccaagactaaaccaggaagaatttgaa
cctccgaatagaccaataacaggctgtgaaattgaggcaataattattagcttaccaacc
aaaaaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggag
ctggtgccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctgat
gcattttatgagcccagcatcatcctgataccaaagcctggcagagacacagcaaaaaaa
gagaattttagaccaatatccctgatgaacatcgatgcaaaaatcctcaataaaatactg
gcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcctcatc
cctgggatgcaaggctggttcaacatatgcaaatcaataaatgtaatccagcatataaac
agaaccaacgacaaaaaccacatgattatctcaatagatgtggaaaaggcctttgacaaa
attcaacaaccttcatgctaa

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_4|115_aa
MQYKLICVSKKKRSSGSISDLPNSERVLSGIQTSPKYSPQFTKSVKSIVETESEGGLSYE
YRWRRRRVEEGPQNSNTWGGDTYGILRFGKAPLPLNKTNPATSENRKSAKGNAKA

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_4|348_bp
atgcagtacaaacttatttgtgtaagtaaaaaaaaacgaagctcagggtcgataagtgac
ttgcccaacagtgaaagagtcttatctggaatccagacatcacctaaatacagcccacag
tttacgaaatctgtcaaaagcatcgtagaaacagaaagcgaaggaggactatcgtatgag
taccgctggaggagacgtagagttgaggagggcccccaaaacagcaatacctggggagga
gatacctacggcattctgagattcgggaaagcaccactgccgctgaataaaacgaaccca
gcaacttccgaaaacagaaaatccgccaaaggaaacgccaaggcatga

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_5|390_aa
MAISPRSDATFSSQKSTPSESPRTKKFPLTEEEIFYMNCRAAYLTVFKSSLENIISKDQL
YLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDG
CILHTDLYKFLTKRGEKMTREEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTTLE
KLEVDSKLMRHQFGNHIEGSPERDPSPVPKPSPKITRKTDPETFLNKDIFEVIDLDGNGL
LSLEEYNFFELRTSGEKCDEDAWAVCRENFDTKRNELTRQGFMDLNLMEANDREGDPCDL
WVTLHSMGYNKALELTEACPFVIDIYAEKCKPKIKAVHMEACSGQLEKAICKSVLSNGDA
KVMDGYENIIVHTYSCDTWITSVIENKSVS

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_5|1173_bp
atggcgatcagtccacgaagcgatgcaactttctccagtcagaaatcaacaccttcagag
agtcctcgaacaaagaaatttccactaactgaagaggaaatattttatatgaattgtaga
gctgcctacttaactgtcttcaaaagcagcttggaaaacattatttctaaagatcaactt
tacttagctcttcagcatgcaggaagaaatccatcccaaaagaccattaataagtattgg
actcctcaaactgccaaactgaattttgatgatttttgtataattttaaggaaggaaaaa
cctacttcaaaagcagaactactaaaatcatttaagcaattagatgtaaatgatgatggc
tgtattttacacactgacctttataaatttctaacaaagagaggtgagaagatgactcga
gaagaagtaaatgccataataaatttggctgatgtaaatgctgatggcaaatttgactac
atcaagttttgtaaattatatatgacaaccaacgagcaatgtctcaagactacactagaa
aaactagaggttgacagtaaattgatgcgtcaccagtttggaaaccacatcgaagggtcc
cctgaaagggacccatcaccagtaccaaaaccatcacctaaaatcacaagaaaaactgat
ccagaaacattcttaaataaagatatatttgaagtaattgatttagatggaaatggtctt
cttagccttgaagaatataatttttttgaattgagaacaagtggtgagaaatgtgatgaa
gatgcttgggctgtctgcagagagaattttgatacaaagaggaatgaactaacaagacaa
ggatttatggatttgaatctaatggaagctaatgatcgagaaggagatccttgtgacctt
tgggtaactctacactctatgggctacaataaagctctggagttgacagaggcatgtcca
tttgtcattgatatctatgcagaaaaatgcaagccaaaaattaaagctgtccatatggag
gcatgtagtggacaacttgagaaggccatttgtaaatctgttcttagcaacggtgatgcc
aaagtaatggatggctatgaaaatataatcgtgcatacttacagttgtgacacctggata
acgtcagttattgaaaacaagagtgtgagctag

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_6|106_aa
MNKGLRVNIYTDCKYAFHILHHHAVIWAERNFLTMQGSSIINASLTKTLLKAALLPKEAG
VIHCKGHQKASDPIAQDNAYADKVAKKAAIKRHQIPLLRTMLMLIR

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_6|321_bp
atgaataaaggactacgcgtcaatatttatactgactgtaaatatgccttccatatcttg
caccaccatgctgttatatgggcagaaagaaatttcctcactatgcaagggtcctccatc
attaatgcctctttaacaaaaactcttctcaaagccgctttacttccaaaggaagctgga
gtcattcactgcaaaggccatcaaaaggcatcagatcccatcgctcaagacaatgcttat
gctgataaggtagctaaaaaagcagccatcaaaaggcatcagatcccattgctcaggaca
atgcttatgctgataagatag

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_7|185_aa
MVKIVTVKTQAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG
GDGRFYMKEAIQLIARIAAANGDWRFPLARSPTLWGKGGESTHPPGASVLYTTVTFVQDK
YLYDVTTLHILDATQSAHMRIISIMIHHLQLGALMPCAFLPGLYLKSQISLSRLDLTAAD
LFGPL

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_7|558_bp
atggtgaagatcgtgacagttaagacccaggcgtaccaggaccagaagccgggcacgagc
gggctgcggaagcgggtgaaggtgttccagagcagcgccaactacgcggagaacttcatc
cagagtatcatctccaccgtggagccggcgcagcggcaggaggccacgctggtggtgggc
ggggacggccggttctacatgaaggaggccatccagctcatcgctcgcatcgctgccgcc
aacggggactggcgcttcccgctggctcggagcccgacactgtggggcaagggtggcgag
agcacccatccccctggggcgtcagttctatatacaacagttacatttgtgcaagataaa
tacttgtatgatgtgactacactgcacattcttgatgctactcagagtgcacatatgaga
atcatctcaatcatgattcatcacctgcaacttggagcacttatgccctgtgcctttcta
ccgggcttatatttgaaatctcagatttccctgtcaaggcttgatcttaccgctgcagat
ctgtttggaccactctga

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_8|88_aa
MGDTEIMSSVRGQGPQYTLTRHFSHYIAMPTCGDRFMHYCMPQIHSTVLSNKKTFSKCFR
DGKHPIKSYSRRFLEQVDLINYSPEPLS

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_8|267_bp
atgggggatacagagattatgtcatctgtccgaggtcagggcccccaatacaccctaacg
aggcacttctcacactatattgcaatgcccacttgcggagaccgttttatgcactactgc
atgccccaaatacacagcactgtattaagcaataagaaaacattcagtaaatgtttcagg
gatggaaagcaccccatcaaatcttattcacggagatttctggagcaagtggacctaatc
aactattcaccagaaccactatcctaa

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_9|729_aa
MSDFEEWISGTYRKMEEGPLPLLTFATAPYHDQKPGTSGLRKKTYYFEEKPCYLENFIQS
IFFSIDLKDRQGSSLVVGGDGRYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCI
IRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGEFAVILRTGPAPEAITDKIFQISKT
IEEYAVCPDLKVDLGVLGKQQFDLENKFKPFTGMFTFLLFLPTPISKLSDFPFNVLVEGL
QLWKDFLEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKIRIDAMHGVVGPYVKKILCE
ELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGK
HGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRYWEKARFLQQLAVPPP
GSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWQKYGRNFFTSQPVGLNFVTSSRYD
YEEVEAEGANKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYSDPVDGSISRNQV
ETDRCVMVYALVLCTVQYPHSGILNLDSRGIFALSGMICKMMCPLYMQKGAPESKKEGEL
WELRCQLLSFLSADYSRVTALLMNGTIKHQMGIGDEQQVKSSIFLGLRLIFTDGSRIVFR
LSGTGSAGATIRLYIDSYEKDVAKINQDPQLLGHQHFVGTAQALRGNVVVSAGGVDSPFP
GIMDRWRFR

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_9|2190_bp
atgagtgattttgaagaatggatttctgggacatatagaaaaatggaagaaggtcctctc
cctctgttgacttttgctacagctccctaccacgatcagaaaccaggaacaagtggatta
cggaagaaaacctattattttgaggaaaagccatgctatctggagaatttcatccagagt
atattcttttccatagacctaaaagatcgccagggatcatcactggtggttggtggagat
gggcggtactttaataaatcagcaatagaaacaatagtgcagatggcagctgccaatggg
atcggtcgcttggttatcggacagaatggaatcctctccacccctgctgtatcctgcatc
attagaaaaatcaaagccattggtgggatcattctgacagccagtcacaacccagggggc
cccaatggagattttggaatcaaattcaatatttctaatggaggtgagtttgctgtcatt
ttgaggacaggtcctgctccagaagcaataactgataaaattttccaaatcagcaagaca
attgaagaatatgcagtttgccctgacctgaaagtagaccttggtgttctgggaaagcag
cagtttgacttggaaaataagttcaaacccttcacaggcatgtttactttcctcctcttt
ctgcccactcctatttccaagttgagcgattttcctttcaacgttttagtagagggtctt
cagctttggaaagatttcctggaaattgtggattcggtagaagcttatgctacaatgctg
agaagcatctttgatttcagtgcactgaaagaactactttctgggccaaaccgactgaag
atccgtattgatgctatgcatggagttgtgggaccgtatgtaaagaagatcctctgtgaa
gaactcggtgcccctgcgaactcggcagttaactgcgttcctctggaggactttggaggc
caccaccctgaccccaacctcacctatgcagctgacctggtggagaccatgaagtcagga
gagcatgattttggggctgcctttgatggagatggggatcgaaacatgattctgggcaag
catgggttctttgtgaacccttcagactctgtggctgtcattgctgccaacatcttcagc
attccgtatttccagcagactggggtccgcggctttgcacggagcatgcccacgagtggt
gctctggaccggtactgggagaaagcacgtttcttacagcagcttgctgtcccccctcca
ggttctgaccacatccgtgagaaagatggactgtgggctgtccttgcctggctctccatc
ctagccacccgcaagcagagtgtggaggacattctcaaagatcattggcaaaagtatggc
cggaatttcttcaccagtcagcccgtgggcctcaacttcgtgacttcttccaggtatgat
tacgaggaggtggaagctgagggcgcaaacaaaatgatgaaggacttggaggccctgatg
tttgatcgctcctttgtggggaagcagttctcagcaaatgacaaagtttacactgtggag
aaggccgataactttgaatacagcgacccagtggatggaagcatttcaagaaatcaggta
gaaacagaccggtgtgtaatggtttatgcccttgttctgtgcactgtccagtaccctcat
tctgggattcttaacctggactccagagggatttttgcactctctggaatgatatgcaag
atgatgtgtccattgtacatgcagaaaggagccccagaatctaagaaagagggagaactg
tgggaacttagatgtcaactcctctcttttctgtcagcagattatagcagagtgacagca
ttgctaatgaatggcaccattaaacaccagatggggattggtgacgaacagcaggtgaag
agcagcatctttttgggcttgcgcctcattttcacagatggttctcgaatcgtcttccga
ctgagcggcactgggagtgccggggccaccattcggctgtacatcgatagctatgagaag
gacgttgccaagattaaccaggacccccagctgctaggccatcagcactttgtggggact
gcccaagccctaaggggaaatgtggtagtttcagcaggtggagttgattctccttttcca
ggtataatggatcggtggagatttagataa

>gi568815597f:63425573_63672513|GENSCAN_predicted_peptide_10|335_aa
MKGVAKFDKEVSSEGPSQSKLEAIHPDNGEIRLPSKQKPGPIVQDNGITPKAFWRSSRLP
PHFTGPDCKGLGEQNNFKALLFAKLFGCPKFSSSEFKHRPRSWVNTGEKGSLCHVGVPRA
VEEMESKQVMNIEWDKRLEGGNRGDRNTRKSSQTRHWRLRKHFLEETMFKLRPEEQVGVG
RIWRMVEWRGKVENVVEGGMEGKGDSGGKKSSFQGLGAGGRCHGSPRLKLGICCQVEAGK
AVEIRSGRRKFLKPFQGPQNWEYPQLIQEMRRQKRVRKHERYLGSEFQFHHTVAENLGQI
NELLLSFSCLNWKARRMMSCFEGYWKASSPTSEIE

>gi568815597f:63425573_63672513|GENSCAN_predicted_CDS_10|1008_bp
atgaagggtgtggccaagtttgataaggaagttagttcagaggggccatctcaatcaaag
ctagaagctattcatccagacaatggggagattagactcccgtctaaacagaagccagga
cctattgtgcaagacaatggaataaccccgaaggcattttggagatcatcaaggctgccc
cctcacttcacaggtccagactgcaagggactgggggaacagaacaatttcaaggctctg
ctctttgccaagctctttggctgccccaagttcagctctagtgaattcaaacacaggcct
agatcctgggtaaacactggtgaaaaaggcagtctctgccatgtaggagttcccagggca
gtagaagaaatggaaagtaaacaggttatgaacatagaatgggataagcgcctcgaaggg
ggaaatagaggtgataggaacaccagaaaaagctcccaaaccagacactggaggctcaga
aagcacttcttggaggaaacgatgtttaaattgagacctgaggaacaagtaggagttggg
agaatatggcggatggtggaatggaggggaaaggtggagaatgtagtggagggtgggatg
gagggtaaaggtgattcaggtggaaagaagagcagcttccaaggcctgggggcaggaggg
aggtgccatggttccccaagactgaagcttggaatctgttgccaagtggaggcaggaaaa
gcagttgaaatacgatcagggaggaggaaatttttgaagccattccaggggccacagaac
tgggagtatccgcagctgattcaagagatgaggaggcagaaaagggtcaggaaacatgaa
cgatacttagggtcagaattccagttccatcacacggtagctgagaacctggggcaaatt
aatgagcttctgttgagcttcagttgcctcaactggaaagcgagaagaatgatgtcttgc
ttcgagggttactggaaagcatctagcccaacatctgagatagaatag