GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:49:40

Sequence gi568815595f:11159038_11360498 : 201461 bp : 44.36% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    541    536    6                               1.05
 1.01 Sngl -   8548   7391 1158  1  0   78   44   328 0.558  23.62
 1.00 Prom -  16442  16403   40                              -3.46

 2.00 Prom +  26114  26153   40                              -4.06
 2.01 Sngl +  36410  36604  195  1  0   58   48   171 0.437   5.27
 2.02 PlyA +  38558  38563    6                               1.05

 3.05 PlyA -  38869  38864    6                               1.05
 3.04 Term -  42152  42135   18  2  0  113   54     0 0.140  -2.58
 3.03 Intr -  43051  42933  119  2  2   68   93    42 0.180   2.88
 3.02 Intr -  55458  55365   94  0  1   94   60    51 0.102   2.44
 3.01 Init -  75470  75231  240  2  0   78   59   297 0.361  23.67
 3.00 Prom -  80319  80280   40                              -4.96

 4.03 PlyA -  81230  81225    6                               1.05
 4.02 Term -  92082  91685  398  1  2  118   50   135 0.888   7.94
 4.01 Init -  95534  95474   61  2  1   65  116    33 0.971   5.21
 4.00 Prom -  96587  96548   40                              -4.46

 5.00 Prom +  97860  97899   40                              -9.65
 5.01 Sngl + 100064 101464 1401  1  0   87   49  1488 0.601 138.83
 5.02 PlyA + 101736 101741    6                               1.05

 6.00 Prom + 104108 104147   40                              -0.06
 6.01 Init + 113275 113393  119  0  2   83  115    41 0.713   4.04
 6.02 Intr + 123156 123237   82  0  1   77   67    76 0.863   4.04
 6.03 Term + 123854 124132  279  1  0   56   40   172 0.651   4.65
 6.04 PlyA + 125450 125455    6                               1.05

 7.00 Prom + 136229 136268   40                              -6.76
 7.01 Init + 139659 139818  160  2  1   79   78   191 0.882  17.22
 7.02 Intr + 140325 140379   55  1  1   79   84    10 0.625  -2.26
 7.03 Intr + 147906 148023  118  0  1  113   55    75 0.586   7.17
 7.04 Intr + 149947 150024   78  0  0  145   92    29 0.925   8.75
 7.05 Intr + 156307 156456  150  0  0   76   77    42 0.499   2.26
 7.06 Intr + 172022 172137  116  1  2  108   28    15 0.003  -3.25
 7.07 Intr + 173935 174056  122  1  2    3   91   108 0.030   2.74
 7.08 Intr + 181608 181698   91  1  1   81   71    63 0.946   2.95
 7.09 Intr + 183098 183242  145  2  1   98  115   -10 0.966   2.98
 7.10 Intr + 188840 188998  159  1  0   89   68   139 0.812  12.18
 7.11 Intr + 199381 199575  195  0  0   80  102   232 0.881  23.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 173984 174056   73  1  1   76   91    47 0.901   5.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_1|385_aa
MNYRYHRPGEARGQQMSRAWRMQGTADVTGLERPGDSRCHGPGEARGQQMSRAWRGQGTA
DVTGLERPGDSRCHGPGEARGQQMSRAWRGQGTADVTGLENAGDSRCHGPGECRGQQMSR
AWRSQGTADVTGLERPGDSRCHGPGEYRGQQMSRAWGIQGTADVTGLENAGDQQMSLVWR
MQGSADVMGLEKPRDSRCHAPGEARGQQMSLAWRSQGKEMLRAWRSQGTADVTAWRIQGT
ANVVGLEEPGDSRCHGPGEARGQEMSWAWRSQGTADVMGLEKPGDSRCHGPGESRGQQMS
RAWRSQGTGDVTAWRSQGTADVMGLEKPGDSRCHGPGESRGQQMSGPGECRRQQMSRAWR
SRKVQCRPHQGRNACLLCSAGIPCA

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_1|1158_bp
atgaactacagatatcacaggcctggagaagccaggggacagcagatgtcacgggcctgg
agaatgcaggggacagcagatgtcacgggcctggagaggccaggggacagcagatgtcac
gggcctggagaggccaggggacagcagatgtcacgggcctggagaggccaggggacagca
gatgtcacgggcctggagaggccaggggacagcagatgtcacgggcctggagaggccagg
ggacagcagatgtcacgggcctggagaggccaggggacagcagatgtcacgggcctggag
aatgcaggggacagcagatgtcacgggcctggagaatgcaggggacagcagatgtcacgg
gcctggagaagccaggggacagcagatgtcacgggcctggagaggccaggggacagcaga
tgtcacgggcctggagaatacaggggacagcagatgtcacgggcctggggaatccaggga
acagcagatgtcacaggcctggagaatgcaggggaccagcagatgtcactggtctggaga
atgcaggggtcagcagatgtcatgggcctggagaagccaagggacagtagatgtcatgcg
cctggagaagccagggggcagcagatgtcactagcctggagaagccaggggaaggagatg
ttgcgggcctggagaagccaggggacagcagatgtcacagcctggagaatccaggggaca
gcaaatgtcgtgggtctggaggagccaggggacagcagatgtcatgggcctggagaagcc
aggggacaggagatgtcatgggcctggagaagccaggggacagcagatgtcatgggcctg
gagaagccaggggacagcagatgtcacgggcctggagaatctaggggacagcagatgtca
cgggcctggagaagccaggggacaggagatgtcacagcctggagaagccaggggacagca
gatgtcatgggcctggagaagccaggggacagcagatgtcatgggcctggagaatctagg
ggacagcagatgtcagggcctggagaatgcaggagacagcagatgtcacgggcctggaga
agccggaaagtacaatgtaggcctcaccagggcaggaatgcttgtctgctctgttctgca
ggaatcccgtgtgcctag

>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_2|64_aa
MWFLNPPPLEVPSTSAYRVGMTWCGCAEARGSTCIQQNQVTLMTVLDEMSYLDNLFLVSC
FLPF

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_2|195_bp
atgtggttcctcaatcccccaccactggaagttccctccacttcagcgtacagagtggga
atgacctggtgtggctgtgctgaagctcgagggtctacgtgtattcagcagaaccaagtg
actctcatgacagtattggatgaaatgagctatctggataatctcttcctggtgtcctgc
ttcttgcccttttga

>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_3|156_aa
MASGPCGEQFKSAFSCFHYSTEEIKGSDCVDRFRAMQECLQKYPDLYPQEDEDEEEEREK
KPAEQAEETAPTEATATKEESIGQQKATVPRNPTITDWFLLDVISHSELFAEIRNNFIYR
KTQPYVLRKNPFSPPLNYPKTSSSSVLVPAPTEGIL

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_3|471_bp
atggccagcggcccctgtggggaacagttcaagtcagccttttcctgcttccactatagc
acggaggagatcaaggggtcagactgtgtagaccggttccgggccatgcaggaatgcctg
cagaaatacccagacctctatccccaagaggatgaggatgaggaagaggaaagagagaag
aagccagcagaacaagcagaagaaacagctcccactgaggccactgcaaccaaagaagag
tctataggacagcagaaggccacagtgcccagaaatcccaccattaccgactggtttctt
ttggatgtgatatcccattcagagttatttgcagaaattagaaataattttatctaccgc
aaaactcaaccgtatgtattaaggaagaatccattttccccacctctgaattaccccaag
acctccagctcttcagtcctggtgcctgccccgactgaggggatcctctga

>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_4|152_aa
MREEKADRYCGDQVTLCIDQATVPVFSPREKEKLKEIGAKESHEGRWVQPDKKEMLSKPF
MREVLSQLHQGTHWGPQAMCDAVLRVYGCVGIYTLARQVADRFRVRRKTNKQPKENGSTT
CRASTLIRESRKAYCPVESPNCSLKKHRSTPL

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_4|459_bp
atgagggaagaaaaggcagacagatactgtggcgaccaggtaactctgtgcatagaccaa
gctacagtccctgttttctcccccagagaaaaagaaaagttaaaagaaataggagccaaa
gaaagtcacgagggaagatgggtacaaccagacaagaaggaaatgctgtctaagcccttc
atgcgagaggtattgtcacagctacatcaaggaactcactggggcccccaagctatgtgt
gatgcagtcctcagagtttatggatgcgtaggaatttatacccttgctagacaagttgca
gatcgtttcagagtgcgcagaaaaaccaacaaacaacctaaagaaaatgggagtaccaca
tgccgtgcatccaccctcatcagggagagtcgaaaggcctattgccctgttgagagtccg
aactgctccctgaaaaaacataggtctacccccttatga

>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_5|466_aa
MASPQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVM
PMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTK
TRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDVTWFKVMTAIINFYL
PTLLMLWFYAKIYKAVRQHCQHRELINRSLPSFSEIKLRPENPKGDAKKPGKESPWEVLK
RKPKDAGGGSVLKSPSQTPKEMKSPVVFSQEDDREVDKLYCFPLDIVHMQAAAEGSSRDY
VAVNRSHGQLKTDEQGLNTHGASEISEDQMLGDSQSFSRTDSDTTTETAPGKGKLRSGSN
TGLDYIKFTWKRLRSHSRQYVSGLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFC
KNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRS

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_5|1401_bp
atggccagcccccagctgatgcccctggtggtggtcctgagcactatctgcttggtcaca
gtagggctcaacctgctggtgctgtatgccgtacggagtgagcggaagctccacactgtg
gggaacctgtacatcgtcagcctctcggtggcggacttgatcgtgggtgccgtcgtcatg
cctatgaacatcctctacctgctcatgtccaagtggtcactgggccgtcctctctgcctc
ttttggctttccatggactatgtggccagcacagcgtccattttcagtgtcttcatcctg
tgcattgatcgctaccgctctgtccagcagcccctcaggtaccttaagtatcgtaccaag
acccgagcctcggccaccattctgggggcctggtttctctcttttctgtgggttattccc
attctaggctggaatcacttcatgcagcagacctcggtgcgccgagaggacaagtgtgag
acagacttctatgatgtcacctggttcaaggtcatgactgccatcatcaacttctacctg
cccaccttgctcatgctctggttctatgccaagatctacaaggccgtacgacaacactgc
cagcaccgggagctcatcaataggtccctcccttccttctcagaaattaagctgaggcca
gagaaccccaagggggatgccaagaaaccagggaaggagtctccctgggaggttctgaaa
aggaagccaaaagatgctggtggtggatctgtcttgaagtcaccatcccaaacccccaag
gagatgaaatccccagttgtcttcagccaagaggatgatagagaagtagacaaactctac
tgctttccacttgatattgtgcacatgcaggctgcggcagaggggagtagcagggactat
gtagccgtcaaccggagccatggccagctcaagacagatgagcagggcctgaacacacat
ggggccagcgagatatcagaggatcagatgttaggtgatagccaatccttctctcgaacg
gactcagataccaccacagagacagcaccaggcaaaggcaaattgaggagtgggtctaac
acaggcctggattacatcaagtttacttggaagaggctccgctcgcattcaagacagtat
gtatctgggttgcacatgaaccgcgaaaggaaggccgccaaacagttgggttttatcatg
gcagccttcatcctctgctggatcccttatttcatcttcttcatggtcattgccttctgc
aagaactgttgcaatgaacatttgcacatgttcaccatctggctgggctacatcaactcc
acactgaaccccctcatctaccccttgtgcaatgagaacttcaagaagacattcaagaga
attctgcatattcgctcctaa

>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_6|159_aa
MPLLLCARAPLPSGKRGQDRVASSGRAPQRELWLPEVERRLLKPHNAGIQCIRSQKLKLM
DTRLHVKQLRTYAVCQRDLVMWFGAYFNDCQSLQPCSWENENRSLLCVLHFGPEKALQGQ
IAVILALLLSEWPHMGSEKSDTECSLPFRTCSFGLLDDL

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_6|480_bp
atgcctctgctcctttgcgcacgcgcgccgcttcccagtggcaagcgcgggcaggaccgc
gttgcgtcatcggggcgcgcgcctcagagagagctgtggttgccggaagttgagcggcgg
cttctcaaaccccataatgctggtatccagtgcatccgttctcaaaaactgaagctgatg
gacaccagattgcatgtgaagcagctaagaacatatgctgtttgtcagcgggacttggtc
atgtggtttggtgcttattttaatgactgccagagcttgcagccctgcagctgggaaaat
gagaatagaagcctgctctgtgtgctccattttggcccagagaaggcacttcagggccaa
attgcagttattctggcacttctgctaagtgaatggccccacatgggctcagagaaatcg
gacactgagtgctcgctgccctttagaacttgttcttttggacttctcgatgacctgtag

>gi568815595f:11159038_11360498|GENSCAN_predicted_peptide_7|463_aa
MAAATGDPGLSKLQFAPFSSALDVGFWHELTQKKLNEYRLDEAPKDIKGYYYNGDSAGLP
ARLTLEFSAFDMSAPTPARCCPAIGTLYNTNTLESFKTADKKLLLEQAANEIWESIKSGT
ALENPVLLNKFLLLTFAIEALECAYDNLCQTEGVTALPYFLIKYDENMVLVSLLKHYSDF
FQGQRTKSFFLLRVFSSYFLPGTMQGTGGADKNLIAPAIKKFCSAVSSSFQSVEVVCFRD
RTMQGARDVAHSIIFEVKLPEMAFSPDCPKAVGWEKNQKGGMGPRMVNLSECMDPKRLAE
SSVDLNLKLMCWRLVPTLDLDKVVSVKCLLLGAGTLGCNVARTLMGWGVRHITFVDNAKI
SYSNPVRQPLYEFEDCLGGGKPKALAAADRLQKIFPGVNARGFNMSIPMPGHPVNFSSVT
LEQARRDVEQLEQLIESHDVVFLLMDTRESRWLPAVIAASKRK

>gi568815595f:11159038_11360498|GENSCAN_predicted_CDS_7|1389_bp
atggcggcagctacgggggatcctggactctctaaactgcagtttgccccttttagtagt
gccttggatgttgggttttggcatgagttgacccagaagaagctgaacgagtatcggctg
gatgaagctcccaaggacattaagggttattactacaatggtgactctgctgggctgcca
gctcgcttaacattggagttcagtgcttttgacatgagtgctcccaccccagcccgttgc
tgcccagctattggaacactgtataacaccaacacactcgagtctttcaagactgcagat
aagaagctccttttggaacaagcagcaaatgagatatgggaatccataaaatcaggcact
gctcttgaaaaccctgtactcctcaacaagttcctcctcttgacatttgcaattgaagca
ctagagtgtgcatatgataatctttgtcaaacagaaggagtcacagctcttccttacttc
ttaatcaagtatgatgagaacatggtgctggtttccttgcttaaacactacagtgatttc
ttccaaggtcaaaggacgaagtcttttttccttctacgtgtatttagctcctactttctg
ccaggcacaatgcaaggcacagggggtgcagacaagaatttgatagcccctgctatcaag
aagttctgtagtgcagtgagtagcagtttccagtctgttgaagttgtttgcttccgtgac
cgtaccatgcagggggcgagagacgttgcccacagcatcatcttcgaagtgaagcttcca
gaaatggcatttagcccagattgtcctaaagcagttggatgggaaaagaaccagaaagga
ggcatgggaccaaggatggtgaacctcagtgaatgtatggaccctaaaaggttagctgag
tcatcagtggatctaaatctcaaactgatgtgttggagattggttcctactttagacttg
gacaaggttgtgtctgtcaaatgtctgctgcttggagccggcaccttgggttgcaatgta
gctaggacgttgatgggttggggcgtgagacacatcacatttgtggacaatgccaagatc
tcctactccaatcctgtgaggcagcctctctatgagtttgaagattgcctagggggtggt
aagcccaaggctctggcagcagcggaccggctccagaaaatattccccggtgtgaatgcc
agaggattcaacatgagcatacctatgcctgggcatccagtgaacttctccagtgtcact
ctggagcaagcccgcagagatgtggagcaactggagcagctcatcgaaagccatgatgtc
gtcttcctattgatggacaccagggagagccggtggcttcctgccgtcattgctgcaagc
aagagaaag