GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:53:23

Sequence gi568815592f:132438290_132639333 : 201044 bp : 37.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -   6119   5904  216  2  0   34  105   106 0.043   4.68
 1.07 Intr -  18628  18498  131  2  2   92   81    61 0.234   5.29
 1.06 Intr -  21059  20954  106  2  1   55   61    19 0.183  -5.23
 1.05 Intr -  25786  25704   83  2  2  100   91   149 0.963  14.84
 1.04 Intr -  26593  26536   58  1  1   95   85    72 0.787   5.14
 1.03 Intr -  33311  33174  138  2  0   81   84   108 0.979   9.44
 1.02 Intr -  34086  33993   94  2  1   82   69    95 0.993   6.05
 1.01 Init -  46060  45885  176  1  2   41   81   143 0.750   7.77
 1.00 Prom -  47708  47669   40                              -6.55

 2.00 Prom +  48229  48268   40                              -7.45
 2.01 Init +  52261  52469  209  0  2   67   81   102 0.297   5.74
 2.02 Intr +  63641  63783  143  2  2  -23   66   167 0.154   2.48
 2.03 Intr +  66026  66109   84  0  0   51   94    91 0.421   4.87
 2.04 Term +  66911  67038  128  0  2   82   49    54 0.463  -1.64
 2.05 PlyA +  67318  67323    6                               1.05

 3.00 Prom +  72666  72705   40                              -4.55
 3.01 Init +  87735  87893  159  2  0   67    3   192 0.539   8.47
 3.02 Term +  87999  88151  153  2  0   99   48   106 0.259   4.64
 3.03 PlyA +  90058  90063    6                               1.05

 4.00 Prom +  94328  94367   40                              -6.05
 4.01 Sngl + 100001 101047 1047  1  0   65   42   259 0.889  15.89
 4.02 PlyA + 101101 101106    6                               1.05

 5.04 PlyA - 101502 101497    6                               1.05
 5.03 Term - 110087 109985  103  1  1   90   42    75 0.418  -0.13
 5.02 Intr - 110384 110251  134  2  2   75   69    84 0.262   3.72
 5.01 Init - 112205 112200    6  2  0   69  110     0 0.306   1.33
 5.00 Prom - 112492 112453   40                              -5.25

 6.00 Prom + 114068 114107   40                              -3.75
 6.01 Init + 114404 114979  576  1  0   92   87   347 0.297  30.18
 6.02 Intr + 118919 118949   31  1  1   71   90   -22 0.002  -6.91
 6.03 Term + 131950 133070 1121  2  2  104   47   291 0.301  17.79
 6.04 PlyA + 133160 133165    6                               1.05

 7.02 PlyA - 133398 133393    6                               1.05
 7.01 Sngl - 151397 150384 1014  2  0   18   37   616 0.985  46.26
 7.00 Prom - 151756 151717   40                              -8.75

 8.00 Prom + 152035 152074   40                             -11.24
 8.01 Init + 152296 152302    7  0  1   89   69     0 0.233  -0.68
 8.02 Intr + 156768 157036  269  1  2  -69   88   366 0.736  17.23
 8.03 Term + 162159 162212   54  2  0   65   48   119 0.894   2.18
 8.04 PlyA + 162237 162242    6                               1.05

 9.00 Prom + 165791 165830   40                              -5.45
 9.01 Init + 167774 167832   59  1  2   62   74    55 0.505   2.33
 9.02 Term + 170287 170488  202  1  1  110   42   241 0.813  17.58
 9.03 PlyA + 171774 171779    6                               1.05

10.00 Prom + 175668 175707   40                              -5.35
10.01 Sngl + 179518 179775  258  0  0   77   42   183 0.872   7.48
10.02 PlyA + 181205 181210    6                               1.05

11.02 PlyA - 182834 182829    6                               1.05
11.01 Sngl - 189233 188976  258  2  0   62   47   171 0.768   5.28
11.00 Prom - 196235 196196   40                              -4.55

12.03 PlyA - 196519 196514    6                               1.05
12.02 Term - 197312 196949  364  1  1   87   48   186 0.684   7.55
12.01 Intr - 197753 197627  127  0  1   61   76    70 0.767   1.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_1|334_aa
MAADPRGTEWIFIAVEEPETGHCFVFDDPVVHLFRMCRKWYYFSVMKNVTYSLKSRLWKQ
QKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAE
REKEFVARVRASSRVSAPGGWEEKLPPIEKASWALDSIEANVENAEVHVQQANQQLSRAA
DYQGVIDFTYFVRLVEVALHIRKTPFFSTKGITENSFVMASEERWSLLFSWSTLNLEPET
EGVCGKCGFWSTCTAEDILEREWILTKVIQLKQPGEPMLLSPYNNHYNVRKVTLDKLGKE
DFIQDNCKRDQDYHNGGEIELNHTETDRRILSIE

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_1|1002_bp
atggcagcagacccacgtggaacagaatggatcttcattgctgtagaagagccagaaacg
ggacactgttttgtttttgatgacccagtagtgcatctttttcggatgtgtaggaaatgg
tattatttttctgttatgaaaaatgtaacatactctttgaagtcacgtctgtggaagcaa
cagaagcagcagtatactaaccagcttgccaaagaaacagataagtacattaaagagttt
ggatctctgcccaccacccccagtgaacagcgtcaaaggaaaatacagaaggatcgctta
gtggcagagttcacaacatcactgacaaacttccagaaggtccagaggcaggctgctgag
cgagagaaagagtttgttgctcgagtaagagccagttccagagtgtctgcccctggaggg
tgggaagaaaaactgccaccaattgagaaggcttcatgggccctcgatagcatagaagcc
aatgtggaaaatgcagaggtgcacgttcagcaagcaaatcagcagctgtcaagggcagca
gattatcagggtgtcatcgattttacctactttgtcagactggtagaagttgctttgcat
atcagaaaaactccatttttttccacaaaagggattacagaaaactcttttgtgatggcc
tctgaggaaagatggtctctccttttctcatggtcaactctcaacttagaaccagagaca
gaaggagtttgtgggaagtgtggtttctggtctacctgcactgcagaggacattctagaa
agagaatggatattgactaaagttatacagctgaaacaaccaggagaacccatgcttctt
tctccgtataataaccattataatgtaagaaaagttacactggacaagttaggcaaggaa
gactttattcaagacaattgcaaaagagatcaagactatcacaatggaggagaaattgaa
ctcaatcacactgaaacagacaggagaattttaagcattgag

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_2|187_aa
MTKFSKTCTYGQKQQKIAGPEQEAVWVGRRITGVAELHTVTSKSSEELIPPRVRMGRSRA
EKHRGLCWRRSDARGAKQSQRRWPVTNCSSSQCTIPTVPAVDNVVPGTVHFLVLPEIEEG
ERMTLPFQQPASQNRRDTEILPQEAGGGEIQSQGSDAKAIHACYHIELMPQKISGREEAT
VKYVSLL

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_2|564_bp
atgaccaaattctcaaaaacgtgtacatacggccaaaagcaacagaaaatagcaggtcct
gagcaggaagccgtatgggtggggcggagaataaccggggttgcagagctccacactgtc
accagcaaatcatcagaagagctgatcccacccagagtgagaatgggcagaagcagggct
gagaagcaccggggactctgctggagaagatctgatgccagaggagcaaagcagagccaa
cgccggtggcctgtgacaaactgcagcagttctcaatgtaccattcctacagtccctgct
gtggacaacgtggtgcctggcactgtgcacttccttgttcttccagaaatagaggaagga
gaacgaatgactctcccctttcagcagccagcatctcagaatagaagagacactgagata
ctgccacaggaggcaggtggaggtgagattcagtcccagggttctgatgccaaggctatc
catgcttgctaccacatagaactaatgccacagaagatttctggtagagaagaagccaca
gtgaagtatgtgtctttgctctaa

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_3|103_aa
MGDRIRQGQDHGIWELFPPQRGNLRAHGTGRKDPFVTDEWLPELLIQRRCNGWGNCLLFH
HFQRPHVETPGQKIIPPDSEWIKDDRQGPTGGKFEPCQCDIQC

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_3|312_bp
atgggtgaccggattaggcaaggacaggaccatgggatatgggaacttttccctccccag
aggggaaacttgagagctcatgggactggaagaaaagatccctttgtgactgatgagtgg
ctgcctgaacttttgattcagcgacgctgcaatgggtggggcaactgtctgctctttcat
catttccagagaccacatgttgaaactccaggtcagaaaatcattccacctgactctgag
tggatcaaagatgacagacagggcccaacagggggcaagtttgaaccttgccagtgtgat
attcagtgctag

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_4|348_aa
MVNNFSQAEAVELCYKNVNESCIKTPYSPGPRSILYAVLGFGAVLAAFGNLLVMIAILHF
KQLHTPTNFLIASLACADFLVGVTVMPFSTVRSVESCWYFGDSYCKFHTCFDTSFCFASL
FHLCCISVDRYIAVTDPLTYPTKFTVSVSGICIVLSWFFSVTYSFSIFYTGANEEGIEEL
VVALTCVGGCQAPLNQNWVLLCFLLFFIPNVAMVFIYSKIFLVAKHQARKIESTASQAQS
SSESYKERVAKRERKAAKTLGIAMAAFLVSWLPYLVDAVIDAYMNFITPPYVYEILVWCV
YYNSAMNPLIYAFFYQWFGKAIKLIVSGKVLRTDSSTTNLFSEEVETD

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_4|1047_bp
atggtgaacaatttctcccaagctgaggctgtggagctgtgttacaagaacgtgaacgaa
tcctgcattaaaactccttactcgccaggtcctcgatctatcctctacgccgtccttggt
tttggggctgtgctggcagcgtttggaaacttactggtcatgattgctatccttcacttc
aaacaactgcacacacctacaaactttctgattgcgtcgctggcctgtgctgacttcttg
gtgggagtcactgtgatgcccttcagcacagtgaggtctgtggagagctgttggtacttt
ggggacagttactgtaaattccatacatgttttgacacatccttctgttttgcttcttta
tttcatttatgctgtatctctgttgatagatacattgctgttactgatcctctgacctat
ccaaccaagtttactgtgtcagtttcagggatatgcattgttctttcctggttcttttct
gtcacatacagcttttcgatcttttacacgggagccaacgaagaaggaattgaggaatta
gtagttgctctaacctgtgtaggaggctgccaggctccactgaatcaaaactgggtccta
ctttgttttcttctattctttatacccaatgtcgccatggtgtttatatacagtaagata
tttttggtggccaagcatcaggctaggaagatagaaagtacagccagccaagctcagtcc
tcctcagagagttacaaggaaagagtagcaaaaagagagagaaaggctgccaaaaccttg
ggaattgctatggcagcatttcttgtctcttggctaccatacctcgttgatgcagtgatt
gatgcttatatgaattttataactcctccttatgtttatgagattttagtttggtgtgtt
tattataattcagctatgaaccccttgatttatgctttcttttaccaatggtttgggaag
gcaataaaacttattgtaagcggcaaggtcttaaggactgattcgtcaacaactaattta
ttttctgaagaagtagagacagattaa

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_5|80_aa
MQASLASAAGKKCGPWMTVSRCSCHLCEMPVSRFFDPLRHRSQKSEKQDEDFFRTFSQDG
SVSSFIYPCAPDENMERAGI

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_5|243_bp
atgcaggcatcacttgcttctgctgctggcaagaaatgtggtccatggatgacggtgtcc
cgctgctcctgtcacctctgtgagatgcctgtctccaggttttttgatcccctcaggcat
agaagtcagaagtcagaaaaacaagatgaagatttctttaggactttcagtcaagatggt
tcagttagttcattcatctacccctgtgctccagatgaaaatatggaaagagcaggcata
taa

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_6|575_aa
MTSNFSQPVVQLCYEDVNGSCIETPYSPGSRVILYTAFSFGSLLAVFGNLLVMTSVLHFK
QLHSPTNFLIASLACADFLVGVTVMLFSMVRTVESCWYFGAKFCTLHSCCDVAFCYSSVL
HLCFICIDRYIVVTDPLVYATKFTVSVSGICISVSWILPLTYSGAVFYTGVNDDGLEELV
SALNCVGGCQIISGRLLFSKHQGALKIRNNPVFFVIINKDKTSPYVNNSVMSSNSSLLVA
VQLCYANVNGSCVKIPFSPGSRVILYIVFGFGAVLAVFGNLLVMISILHFKQLHSPTNFL
VASLACADFLVGVTVMPFSMVRTVESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFISIDR
YIAVTDPLVYPTKFTVSVSGICISVSWILPLMYSGAVFYTGVYDDGLEELSDALNCIGGC
QTVVNQNWVLTDFLSFFIPTFIMIILYGNIFLVARRQAKKIENTGSKTESSSESYKARVA
RRERKAAKTLGVTVVAFMISWLPYSIDSLIDAFMGFITPACIYEICCWCAYYNSAMNPLI
YALFYPWFRKAIKVIVTGQVLKNSSATMNLFSEHI

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_6|1728_bp
atgaccagcaatttttcccaacctgttgtgcagctttgctatgaggatgtgaatggatct
tgtattgaaactccctattctcctgggtcccgggtaattctgtacacggcgtttagcttt
gggtctttgctggctgtatttggaaatctcttagtaatgacttctgttcttcattttaag
cagctgcactctccaaccaattttctcattgcctctctggcctgtgctgacttcttggta
ggtgtgactgtgatgcttttcagcatggtcaggacggtggagagctgctggtattttgga
gccaaattttgtactcttcacagttgctgtgatgtggcattttgttactcttctgtcctc
cacttgtgcttcatctgcatcgacaggtacattgtggttactgatcccctggtctatgct
accaagttcaccgtgtctgtgtcgggaatttgcatcagcgtgtcctggattctgcctctc
acgtacagcggtgctgtgttctacacaggtgtcaatgatgatgggctggaggaattagta
agtgctctcaactgcgtaggtggctgtcaaattatttctggaagactactattctctaaa
catcagggagcactgaaaatcaggaacaatcctgtattttttgtgataatcaacaaggac
aaaacttctccatatgtaaataacagcgttatgagcagcaattcatccctgctggtggct
gtgcagctgtgctacgcgaacgtgaatgggtcctgtgtgaaaatccccttctcgccggga
tcccgggtgattctgtacatagtgtttggctttggggctgtgctggctgtgtttggaaac
ctcctggtgatgatttcaatcctccatttcaagcagctgcactctccgaccaattttctc
gttgcctctctggcctgcgctgatttcttggtgggtgtgactgtgatgcccttcagcatg
gtcaggacggtggagagctgctggtattttgggaggagtttttgtactttccacacctgc
tgtgatgtggcattttgttactcttctctctttcacttgtgcttcatctccatcgacagg
tacattgcggttactgaccccctggtctatcctaccaagttcaccgtatctgtgtcagga
atttgcatcagcgtgtcctggatcctgcccctcatgtacagcggtgctgtgttctacaca
ggtgtctatgacgatgggctggaggaattatctgatgccctaaactgtataggaggttgt
cagaccgttgtaaatcaaaactgggtgttgacagattttctatccttctttatacctacc
tttattatgataattctgtatggtaacatatttcttgtggctagacgacaggcgaaaaag
atagaaaatactggtagcaagacagaatcatcctcagagagttacaaagccagagtggcc
aggagagagagaaaagcagctaaaaccctgggggtcacagtggtagcatttatgatttca
tggttaccatatagcattgattcattaattgatgcctttatgggctttataacccctgcc
tgtatttatgagatttgctgttggtgtgcttattataactcagccatgaatcctttgatt
tatgctttattttacccatggtttaggaaagcaataaaagttattgtaactggtcaggtt
ttaaagaacagttcagcaaccatgaatttgttttctgaacatatataa

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_7|337_aa
MRAVFIQGAEEHPAAFCYQVNGSCPRTVHTLGIQLVIYLACAAGMLIIVLGNVFVAFAVS
YFKALHTPTNFLLLSLALADMFLGLLVLPLSTIRSVESCWFFGDFLCRLHTYLDTLFCLT
SIFHLCFISIDRHCAICDPLLYPSKFTVRVALRYILAGWGVPAAYTSLFLYTDVVETRLS
QWLEEMPCVGSCQLLLNKFWGWLNFPLFFVPCLIMISLYVKIFVVATRQAQQITTLSKSL
AGAAKHERKAAKTLGIAVGIYLLCWLPFTIDTMVDSLLHFITPPLVFDIFIWFAYFNSAC
NPIIYVFSYQWFRKALKLTLSQKVFSPQTRTVDLYQE

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_7|1014_bp
atgagagctgtcttcatccaaggtgctgaagagcaccctgcggcattctgctaccaggtg
aatgggtcttgccccaggacagtacatactctgggcatccagttggtcatctacctggcc
tgtgcagcaggcatgctgattatcgtgctagggaatgtatttgtggcatttgctgtgtcc
tacttcaaagcgcttcacacgcccaccaacttcctgctgctctccctggccctggctgac
atgtttctgggtctgctggtgctgcccctcagcaccattcgctcagtggagagctgctgg
ttcttcggggacttcctctgccgcctgcacacctacctggacaccctcttctgcctcacc
tccatcttccatctctgtttcatttccattgaccgccactgtgccatctgtgaccccctg
ctctatccctccaagttcacagtgagggtggctctcaggtacatcctggcaggatggggg
gtgcccgcagcatacacttcgttattcctctacacagatgtggtagagacaaggctcagc
cagtggctggaagagatgccttgtgtgggcagttgccagctgctgctcaataaattttgg
ggctggttaaacttccctttgttctttgtcccctgcctcattatgatcagcttgtatgtg
aagatctttgtggttgctaccagacaggctcagcagattaccacattgagcaaaagcctg
gctggggctgccaagcatgagagaaaagctgccaagaccctgggcattgctgtgggcata
tacctcttgtgctggctgcccttcaccatagacacgatggtcgacagcctccttcacttt
atcacacccccactggtctttgacatctttatctggtttgcttacttcaactcagcctgc
aaccccatcatctatgtcttttcctaccagtggtttcggaaggcactgaaactcacactg
agccagaaggtcttctcaccgcagacacgcactgttgatttgtaccaagaatga

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_8|109_aa
MTDEAEVKNGGGAEYDVTAAVDFAKEVSKIPAGLDGCDHTEGHDHTAQQKVSDGHGEDQE
VGRGVELLEVSDGNHYDHVAQHCHHYRPDHDQLNAQALNSPIGHEEELL

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_8|330_bp
atgacagatgaagcagaggtgaaaaatggaggtggtgcagagtatgatgtcacagcagct
gtggactttgcaaaagaggtctccaaaataccagcaggactcgatggatgtgatcacact
gaagggcatgaccacacagctcagcaaaaagtcagtgatggccatggagaggatcaagaa
gttggtcggggagtggagctgcttgaagtgagcgatggaaatcattacgatcatgttgcc
cagcattgtcatcactatagacccgatcatgaccagcttaatgcacaggctctgaactcc
ccaatcggccatgaggaggaactgctctga

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_9|86_aa
MVIKMVKVDTGEYKRGQGGKHMADDSSMLFGNDKDFAINTNHDGARGKETCSEQYCPPEF
VESKGTEIEASNKYLIALHTGNIGLR

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_9|261_bp
atggtcataaaaatggtaaaagtagacactggggaatacaagagaggacaaggagggaag
cacatggctgatgactcgagcatgctgtttggaaacgataaagattttgccataaatacc
aaccatgatggagccaggggtaaagaaacatgtagtgaacaatattgtcccccagaattt
gttgaaagtaagggcacagaaattgaagcaagcaacaagtatcttatagctctgcatacc
ggaaacatcggcctcagatag

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_10|85_aa
MKNGCYAKHQVKTIINLAKCKPKIPAVLHRSDHTIWHDGESQEEISDGHGEDEEVGWCVK
LLEVGNGNYHGKIAKYCDEYGSCHK

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_10|258_bp
atgaaaaatggatgttatgctaagcatcaggtcaaaactataataaatcttgcaaaatgt
aagcccaaaataccagcagttctccaccgatctgatcatactatatggcatgatggtgaa
tcccaggaggaaatcagtgatggccatggagaggatgaggaagttggttggtgtgtgaag
ctgcttgaagtaggaaatggaaattatcatggcaagattgccaaatattgtgatgaatat
ggatcctgccataaatga

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_11|85_aa
MSKDFMTKTPKAMATKANIDKWDLIKLRSFCTAKETIIRVNRKPTEWEKNFAIYPSDKGL
ISRVYEELKQIYKKKTTPSKSVQGL

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_11|258_bp
atgagcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaatattgac
aaatgggatctaattaaactaaggagcttctgcacagcaaaagaaactatcatcagagtg
aacaggaaacctacagaatgggagaaaaattttgcaatctatccatctgacaaagggcta
atatccagagtctacgaggaacttaaacaaatttacaagaaaaaaacaaccccatcaaaa
agtgtgcaaggactatga

>gi568815592f:132438290_132639333|GENSCAN_predicted_peptide_12|163_aa
XSGTSTADLLEFAGGPLQTLFAWVSPAKAAEQQKLLPAPSSGRDVLPIEEESREAVWLQL
LFCAAVGCAQSKLPGGIVYTVRGKQPTQASVTVDAPPNTKLECPRLTADCCAASENFKPV
DLSLLGSMGEGPSEQDHLTPWLYPLFHGSEWFCLAGIPGATGI

>gi568815592f:132438290_132639333|GENSCAN_predicted_CDS_12|492_bp
nagtcaggcacctctactgctgatctgctggagtttgctgggggtccactccagaccctg
tttgcctgggtatcaccagccaaggctgcagaacagcaaaaattgctgcctgctccttcc
tctggaagagatgtcctgcccatagaggaggaatctagagaggcagtctggctacagcta
cttttctgtgctgcagtgggctgtgctcagtccaaacttccaggaggcattgtttacact
gtgaggggaaaacagcctactcaagcctcagtaacggtggacgcccctcccaacaccaag
ctcgagtgtcccaggttgactgcagactgctgtgctgccagtgagaatttcaagccagtg
gatcttagcttgctgggctccatgggagagggaccctctgagcaagaccacttgactccc
tggctttatccccttttccatgggagtgaatggttctgtcttgctggcattccaggtgcc
actgggatatga