GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:20:41

Sequence gi568815597r:175060172_175260630 : 200459 bp : 43.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  17263  17656  394  0  1   40   93   594 0.978  50.00
 1.02 Intr +  19162  19536  375  2  0  116   76   693 0.969  65.89
 1.03 Intr +  19992  20255  264  1  0  113   94   259 0.999  26.48
 1.04 Intr +  23579  23764  186  0  0   69   99   219 0.910  20.76
 1.05 Intr +  25234  25323   90  2  0  110   94    67 0.998   9.47
 1.06 Intr +  33819  34082  264  1  0   28   92   378 0.857  29.68
 1.07 Intr +  37246  37512  267  2  0   64   92   360 0.996  31.50
 1.08 Intr +  38161  38424  264  2  0   96  110   397 0.998  40.18
 1.09 Term +  40056  40171  116  1  2   34   54    60 0.560  -4.07
 1.10 PlyA +  40281  40286    6                               1.05

 2.06 PlyA -  41266  41261    6                               1.05
 2.05 Term -  42267  42012  256  2  1   63   36   164 0.528   3.76
 2.04 Intr -  42934  42689  246  0  0   97   46   113 0.709   4.57
 2.03 Intr -  45231  45053  179  0  2   78   56    88 0.929   3.32
 2.02 Intr -  45927  45812  116  1  2   75   97    34 0.854   3.17
 2.01 Init -  48402  48123  280  0  1   97   76   190 0.714  14.22
 2.00 Prom -  49461  49422   40                              -6.36

 3.00 Prom +  49504  49543   40                              -5.66
 3.01 Init +  55345  55354   10  0  1   87   39     0 0.337  -4.28
 3.02 Intr +  56768  57034  267  0  0   80  110   327 0.963  31.60
 3.03 Intr +  58390  58653  264  2  0   56   90   306 0.950  25.08
 3.04 Intr +  63229  63492  264  2  0   37   84   317 0.996  23.68
 3.05 Intr +  66784  66914  131  2  2   54  102   101 0.997   8.51
 3.06 Intr +  67861  67993  133  0  1   82   90    19 0.908   1.72
 3.07 Intr +  68424  68575  152  1  2   81   68   189 0.972  16.08
 3.08 Intr +  75674  75770   97  1  1   75   56   101 0.984   5.18
 3.09 Intr +  76650  76817  168  1  0   79   94   177 0.990  17.32
 3.10 Intr +  84216  84379  164  1  2  135   92   123 0.937  17.09
 3.11 Intr +  90905  91012  108  1  0   65  109   103 0.871  10.58
 3.12 Term +  96047  96193  147  1  0   31   47    81 0.208  -3.80
 3.13 PlyA +  97389  97394    6                               1.05

 4.02 PlyA -  97953  97948    6                               1.05
 4.01 Sngl - 100842 100543  300  0  0  107   33   319 0.989  24.09
 4.00 Prom - 105997 105958   40                              -2.66

 5.00 Prom + 115383 115422   40                              -2.46
 5.01 Init + 123176 123309  134  1  2   66   64   107 0.238   5.71
 5.02 Intr + 164715 164890  176  0  2   85   90    32 0.055   2.68
 5.03 Intr + 184900 185106  207  2  0   84   47    98 0.187   4.35
 5.04 Intr + 187453 187773  321  2  0   93   94    88 0.788   5.73
 5.05 Term + 189187 189248   62  2  2   82   54    55 0.738  -0.53
 5.06 PlyA + 190181 190186    6                               1.05

 6.02 PlyA - 192000 191995    6                               1.05
 6.01 Sngl - 197711 196899  813  2  0   60   39   298 0.920  17.88

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 177590 177775  186  1  0   61   32   160 0.855   2.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:175060172_175260630|GENSCAN_predicted_peptide_1|739_aa
MFRFPMGLLLGSVLLVASAPATLEPPGCSNKEQQVTVSHTYKIDVPKSALVQVDADPQPL
SDDGASLLALGEAREEQNIIFRHNIRLQTPQKDCELAGSVQDLLARVKKLEEEMVEMKEQ
CSAQRCCQGVTDLSRHCSGHGTFSLETCSCHCEEGREGPACERLACPGACSGHGRCVDGR
CLCHEPYVGADCGYPACPENCSGHGECVRGVCQCHEDFMSEDCSEKRCPGDCSGHGFCDT
GECYCEEGFTGLDCAQVVTPQGLQLLKNTEDSLLVSWEPSSQVDHYLLSYYPLGKELSGK
QIQVPKEQHSYEILGLLPGTKYIVTLRNVKNEVSSSPQHLLATTDLAVLGTAWVTDETEN
SLDVEWENPSTEVDYYKLRYGPMTGQEVAEVTVPKSSDPKSRYDITGLHPGTEYKITVVP
MRGELEGKPILLNGRTEIDSPTNVVTDRVTEDTATVSWDPVQAVIDKYVVRYTSADGDTK
EMAVHKDESSTVLTGLKPGEAYKVYVWAERGNQGSKKADTNALTEIDSPANLVTDRVTEN
TATISWDPVQATIDKYVVRYTSADDQETREVLVGKEQSSTVLTGLRPGVEYTVHVWAQKG
DRESKKADTNAPTDIDSPKNLVTDRVTENMATVSWDPVQAAIDKYVVRYTSAGGETREVP
VGKEQSSTVLTGLRPGMEYMVHVWAQKGDQESKKADTKAQTEVYLVHCKMFSSIPDVSPY
PTLSCDNQKCLQTLLTAPG

>gi568815597r:175060172_175260630|GENSCAN_predicted_CDS_1|2220_bp
atgttccgcttccctatggggctcctgcttggctctgtgctcctggtggcttcggcccca
gccactctggagcctcccggctgcagcaacaaggagcaacaggtcactgtcagccacacc
tacaagatcgatgtgcccaagtctgccttggttcaggttgacgctgaccctcagcccctc
agtgacgatggggcttcgctcttggccctgggggaggccagggaggaacagaacatcatc
ttcaggcacaacatccgccttcagacgccacagaaggactgcgagttggcaggcagtgtc
caggacctcctggcccgggtgaagaagctggaggaagagatggtggagatgaaggaacag
tgtagtgcccagcgctgctgccagggagtcactgatctaagccgccactgcagcggccac
gggaccttctccctggagacctgcagctgccactgcgaagagggcagggagggccccgcc
tgcgagcggctggcctgccccggggcgtgcagcggccacgggcgttgcgtggacgggcgc
tgcctgtgccatgagccctacgtgggtgccgactgcggctacccggcctgccctgagaac
tgcagcggacacggcgagtgcgtgcgcggcgtgtgccagtgccacgaagacttcatgtcg
gaggactgcagcgagaagcgctgtcccggcgactgcagcggccacggcttctgtgacacg
ggcgagtgctactgcgaggagggcttcacaggcctggactgtgcccaggtggtcacccca
cagggcctgcagctgctcaagaacacggaggattctctgctggtgagctgggagccctcc
agccaggtggatcactacctcctcagctactaccccctggggaaggagctctctgggaag
cagatccaagtgcccaaggagcagcacagctatgagattcttggtttgctgcctggaacc
aagtacatagtcaccctgcgtaacgtcaagaatgaagtttctagcagcccacagcatcta
cttgccaccacagaccttgctgtgcttggcactgcctgggtgacagatgagactgagaac
tcccttgacgtggagtgggaaaacccctcaactgaggtggactactacaagctgcgatat
ggccccatgacaggacaggaggtagctgaggtcactgtgcccaagagcagtgaccccaag
agccgatatgacatcactggtctgcacccggggactgagtataagatcacggtggtgccc
atgagaggagagctggagggcaagccgatcctcctgaatggcaggacagaaattgacagt
ccaaccaatgttgtcactgatcgagtgactgaagacacagcaactgtctcctgggaccca
gtgcaggctgtcatagacaagtatgtagtgcgctacacttctgctgatggggacaccaag
gaaatggcagtgcacaaggatgagagcagcactgtcctgacgggcctgaagccaggagag
gcatacaaggtctacgtgtgggctgaaaggggcaaccaggggagcaagaaagctgacacc
aatgccctcacagaaattgacagcccagcaaacctggtgactgaccgggtgactgagaat
accgccaccatctcctgggacccggtacaggccaccattgacaagtacgtggtgcgctac
acctctgctgacgaccaagagaccagagaggttctggtggggaaggagcagagcagcact
gtcctgacaggcctgaggccaggtgtggagtacacagtgcatgtctgggcccagaagggg
gaccgagagagcaagaaggctgacaccaacgccccgacagatattgacagccccaaaaac
ctggtgactgaccgggtgacagagaatatggccacggtctcctgggacccggtgcaggcc
gccattgacaagtacgtggtgcgctacacctctgctggtggagagaccagggaggttccg
gtggggaaggagcagagcagcacagtcctgacaggcctgagaccgggtatggagtacatg
gtgcacgtgtgggcccagaagggggaccaggagagcaagaaggccgacaccaaggcccag
acagaggtctatcttgtgcattgtaagatgtttagcagcatccctgatgtctccccctat
cccacactgagttgtgacaaccaaaagtgtctccagacattgctgactgcccctggttga

>gi568815597r:175060172_175260630|GENSCAN_predicted_peptide_2|358_aa
MPKPSPASVGSCAARASPTNTIPCSTAPSPIDHPRADEYELMAWDWQAAPPAAPVRDPLG
EASWAPGLVGTWRVFISSSEIVNTPISTLCLAQGGQARVQVFENASVRTTKSDLPRSSMW
SGRKTSVSAAASKEISKEISKGPQKPPGYRLCPLQAVGGGEFGPTRVHVPFSLSDLKQIK
ADLGKFSDDPDRIEAIKLQMVLQMEPQKSSTNNFYRGPLDQPTGTSPGLESSPLKDTATA
GPLLCPIQQEVARVVIGQIANSSWGVLFRGGIERTRDLQPAMPKPSPTSVGSCAARASPT
NTIPCSMAPSPVDYPRAEEYKFMARDWQTAPPAAPVRDPLGEASWAPESGGDVESLYI

>gi568815597r:175060172_175260630|GENSCAN_predicted_CDS_2|1077_bp
atgcctaagccttcccctgcctccgtgggttcctgtgcagcccgagcctccccaacgaat
accatcccctgctccacggcgcccagtcccatcgaccacccaagggctgacgagtacgag
ctcatggcatgggactggcaggcagctccacctgcagccccagtgcgggatccactcggt
gaagccagctgggctcctggtctggtggggacgtggagagtctttatatctagctcagag
attgtaaacacaccaatcagcaccctgtgtctagctcaaggaggacaggcaagggtgcag
gttttcgagaatgcgtcagtaaggaccactaaatccgaccttcctcggtcctccatgtgg
tctgggaggaaaactagtgtttctgctgctgcgtcgaaggaaataagcaaagaaatctcc
aaaggtccacaaaaacccccgggctatcggttatgtccccttcaagctgtagggggaggg
gaatttggcccaacccgggtgcatgtccccttctccctctctgatttaaagcagatcaag
gcagacctggggaagttttcagatgatcctgatagaatcgaggccatcaagctacagatg
gtcttacaaatggaaccccaaaagagttcaactaacaacttctaccgaggacccctggat
caacccactggcacttcccctggcctagagagttcccctctgaaggacaccgcaactgca
gggccccttctttgccccatccagcaggaagtagctagagtggtcatcggccaaattgcc
aacagcagttggggtgtcctgtttagaggggggattgagaggactcgggacctgcagccc
gccatgcctaagccttccccaacctctgtgggttcctgtgcagcccgagcctccccgacg
aataccatcccctgctccatggcacccagtcccgtcgactacccaagggctgaggagtac
aagttcatggcgcgggactggcagacagctccacctgcagccccagtgcgggatccactg
ggtgaagccagctgggctcctgagtctggtggggacgtggagagtctttatatctag

>gi568815597r:175060172_175260630|GENSCAN_predicted_peptide_3|634_aa
MGKDIDSPQNLVTDRVTENMATVSWDPVRATIDRYVVRYTSAKDGETREVPVGKEQSSTV
LTGLRPGVEYTVHVWAQKGAQESKKADTKAQTDIDSPQNLVTDWVTENTATVSWDPVQAT
IDRYVVHYTSANGETREVPVGKEQSSTVLTGLRPGMEYTVHVWAQKGNQESKKADTKAQT
EIDGPKNLVTDWVTENMATVSWDPVQATIDKYMVRYTSADGETREVPVGKEHSSTVLTGL
RPGMEYMVHVWAQKGAQESKKADTKAQTELDPPRNLRPSAVTQSGGILTWTPPSAQIHGY
ILTYQFPDGTVKEMQLGREDQRFALQGLEQGATYPVSLVAFKGGRRSRNVSTTLSTVGAR
FPHPSDCSQVQQNSNAASGLYTIYLHGDASRPLQVYCDMETDGGGWIVFQRRNTGQLDFF
KRWRSYVEGFGDPMKEFWLGLDKLHNLTTGTPARYEVRVDLQTANESAYAIYDFFQVASS
KERYKLTVGKYRGTAGDALTYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPN
GRYGETKHSEASTEVLSAHYLSAAAGGLHGYRSSTPLNGLCSSGYQARMEPGQVRLQALS
TGIPSGVQQLLPSQMVSEHQFLLCTRMFSNVLGG

>gi568815597r:175060172_175260630|GENSCAN_predicted_CDS_3|1905_bp
atggggaaagacattgacagcccccaaaacctggtgaccgaccgggtgacagagaatatg
gccactgtctcctgggacccggtgcgggccaccattgacaggtatgtggtgcgctacacc
tctgccaaggacggagagaccagggaggttccggtggggaaggagcagagtagcactgtc
ctgacgggcctgaggccgggtgtggagtacacggtgcacgtgtgggcccagaagggggcc
caggagagcaagaaggctgacaccaaggcccagacagacattgacagcccccaaaacctg
gtcactgactgggtgacagagaatacagccactgtctcctgggacccggtgcaggccacc
attgacaggtatgtggtgcactacacgtctgccaacggagagaccagggaggttccagtg
gggaaggagcagagcagcactgtcctgacgggcctgaggccgggcatggagtacacggtg
cacgtgtgggcccagaaggggaaccaggagagcaagaaggctgacaccaaggcccagaca
gaaattgacggccccaaaaacctagtgactgactgggtgacggagaatatggccactgtc
tcctgggacccggttcaggccaccattgacaagtacatggtgcgctacacctctgctgac
ggagagaccagggaggttccggtggggaaggagcacagcagcactgtcctgacgggcctg
agaccaggcatggagtacatggtgcacgtgtgggcccagaagggggcccaggagagcaag
aaggctgacaccaaggcccagacagaactcgaccctcccagaaaccttcgtccatctgct
gtaacgcagtctggtggcatattgacctggacgcccccctctgctcagatccacggctac
attctgacttaccagttcccagatggcacagttaaggagatgcagctgggacgggaagac
cagaggtttgcgttgcaaggccttgagcaaggcgccacctaccctgtctcccttgttgcc
tttaagggtggtcgccggagcagaaatgtatccaccaccctctccacagttggtgcccgt
ttcccacacccttcggactgcagtcaggttcagcagaacagcaatgccgccagtggtctg
tacaccatctacctgcatggcgatgccagccggcccctgcaggtgtactgtgacatggaa
acggacggaggtggctggattgtcttccagaggcggaacactgggcagctggatttcttc
aagcgatggaggagctatgtggaaggctttggggaccccatgaaggagttctggcttgga
cttgacaagctacacaacctcaccaccggcactccagcgcggtatgaggtgagagtggat
ttacagactgccaatgaatctgcctatgctatatatgatttcttccaagtggcctccagc
aaggagcggtataagctgacagttgggaaatacagaggcacggcaggggatgctcttact
taccacaatggatggaagtttacaacttttgacagagacaatgatatcgcactcagcaac
tgtgccctgacacatcatggtggctggtggtataagaactgccacttggccaaccctaat
ggcagatatggggagaccaagcacagtgaggccagtactgaggttctcagcgctcactac
ctgtcggcggcggcagggggcctccatgggtacagaagctccactcccctcaacgggctc
tgctccagtgggtatcaggccaggatggagccggggcaggtgcggctgcaggcattgagc
actggcatcccctcaggggtgcagcagctgctcccctcccagatggtttctgagcatcag
ttcctcctctgcaccagaatgtttagcaatgtcctgggtggatga

>gi568815597r:175060172_175260630|GENSCAN_predicted_peptide_4|99_aa
MERISAFFSSIWDTILTKHQEGIYNTICLGVLLGLPLLVIITLLFICCHCCWSPPGKRGQ
QPEKNKKKKKKKKKKDEEDLWISAQPKLLQMEKRPSLPV

>gi568815597r:175060172_175260630|GENSCAN_predicted_CDS_4|300_bp
atggagagaatcagtgccttcttcagctctatctgggacaccatcttgaccaaacaccaa
gaaggcatctacaacaccatctgcctgggagtcctcctgggcctgccactcttggtgatc
atcacactcctcttcatctgttgccattgctgctggagcccaccaggcaagaggggccag
cagccagagaagaacaagaagaagaagaagaagaagaagaagaaggatgaagaagacctc
tggatctctgctcaacccaagcttctccagatggagaagagaccatcactgcctgtttag

>gi568815597r:175060172_175260630|GENSCAN_predicted_peptide_5|299_aa
MRKNQSEEYLCEGYAMSMGQEAHIHFWHPKLSYLCKLLVGPCRASAVFVGNKVGRWMAIG
AFFLGLECEKKKFKDRAQVEKIGYSYIGKGVECCAKELRLPSEVPECIIGIDILSSWQNP
HIGSLTGRVSAIMVEKAKQKPLELTLPRKTVNQKQYCIPGGIAEISATIKDRARIHRSRN
QGVEVAPLTVTPSDPLAKFLLPVPMTLRSAGLEVLVPEEGTLPPGDMTMIPLNWKLRLPT
GHFGLLLLLSQQAKKGVTVLAGVIDPDYQDEISLLLHNRELLDEEIPCQKKENLRAGGG

>gi568815597r:175060172_175260630|GENSCAN_predicted_CDS_5|900_bp
atgagaaagaaccagagtgaagagtatctctgtgagggctatgctatgtccatgggccag
gaagcccacattcacttctggcaccccaagctctcatacttatgcaagcttcttgtaggc
ccctgcagagccagtgctgtatttgtggggaataaagtggggaggtggatggctataggg
gccttcttcttggggctggagtgtgagaagaaaaaatttaaagacagagctcaggtggaa
aagataggttacagttacattgggaaaggcgttgagtgttgtgctaaggagttaagactt
ccttctgaagtgccagaatgcataattggcatagacatacttagcagctggcagaaccct
cacattggctccctgactggtagggtgagtgctattatggtggaaaaggccaaacagaag
ccattagagcttactctacctagaaaaacagtaaatcaaaaacaatattgcatccctgga
gggattgcagagattagtgccaccatcaaggacagggccaggattcacaggtccaggaat
caaggggtggaagtggcaccactcaccgtcacccctagtgatccattagcaaaatttttg
cttcctgttcccatgacattacgttctgctggcctagaggtcttagttccagaggaagga
accctgccaccaggagacatgacaatgattccattaaactggaagttaaggttgccaact
ggacactttgggctcctgctacttttaagtcaacaagctaagaagggagttacagtgttg
gctggggtgattgacccagactatcaagatgaaatcagtctactactccataacagagaa
ctgctggatgaagagatcccctgtcaaaagaaggaaaatcttagagctggaggaggctga

>gi568815597r:175060172_175260630|GENSCAN_predicted_peptide_6|270_aa
MSELPLTIATRRIKYLGIQLTRDVKDPFKENYKPLLKEIREDTNKWKNIPCTWIGKINTV
KMAILPKVLYRFNAIPIKLPLTFFTELEKSNLNFIWNQKRAHIAKTILSKKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRYINQWNRTETSEITPHIYNHLIFDKPDESKQWGKDSLFN
KWCWENGLAMCRKLKLDPFLTPYTKINSRWIKDFNVRRKTIKTLEENLGNTTQDIGMGKD
FMTKTPKAMAMKAKIDKWDLIKELLQSKRN

>gi568815597r:175060172_175260630|GENSCAN_predicted_CDS_6|813_bp
atgagtgaactcccactcacaattgctacaaggagaataaaatacctaggaatccaactt
acaagggatgtgaaggaccccttcaaggagaactacaaaccactgctaaaggaaataaga
gaggacacaaacaaatggaaaaacattccatgcacatggataggaaaaatcaataccgtg
aaaatggccatacttcccaaggtactttatagattcaatgctatccccatcaagctacca
ttgactttcttcacagaattggaaaaatctaatttaaatttcatatggaaccaaaaaaga
gcccatatagccaagacaatcctaagcaaaaagaacaaagctggaggtatcacgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
cgatatataaaccaatggaacagaacagagacctcagaaataacaccacacatctacaac
catctgatctttgacaaacctgatgaaagcaagcaatggggaaaggattccctatttaat
aaatggtgttgggaaaatgggctagccatgtgtagaaagctgaaactagatcccttcctt
acaccttacacaaaaattaactcaagatggattaaagacttcaatgtaagacgtaaaacc
ataaaaaccctagaagaaaacctaggcaataccactcaggacataggcatgggcaaagac
ttcatgactaaaacaccaaaagcaatggcaatgaaagccaaaattgacaaatgggatcta
attaaagagcttctgcaaagcaaaagaaactag