GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:22:33

Sequence gi568815594f:183405196_183610949 : 205754 bp : 43.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3098   3166   69  1  0  112   53    23 0.453   2.42
 1.02 Intr +   8412   8532  121  2  1   76   61    81 0.876   4.27
 1.03 Intr +  10586  10764  179  0  2   67   23   139 0.763   4.94
 1.04 Term +  12249  12449  201  2  0  130   47    84 0.779   5.89
 1.05 PlyA +  12992  12997    6                               1.05

 2.04 PlyA -  14855  14850    6                               1.05
 2.03 Term -  21560  21466   95  0  2   99   52    93 0.513   4.79
 2.02 Intr -  24602  24371  232  2  1   98   56    42 0.364  -0.65
 2.01 Init -  28341  28234  108  0  0   83   43   173 0.910  10.52
 2.00 Prom -  30918  30879   40                              -4.86

 3.00 Prom +  36840  36879   40                              -3.36
 3.01 Init +  38691  38796  106  2  1   57   28   122 0.902   3.48
 3.02 Intr +  39133  39431  299  2  2  108   52   136 0.566   8.59
 3.03 Intr +  39555  39874  320  2  2   58  117   462 0.601  40.86
 3.04 Intr +  40340  40470  131  2  2  109   37    77 0.987   5.04
 3.05 Term +  40893  42232 1340  1  2   86   35   274 0.975  13.59
 3.06 PlyA +  42598  42603    6                               1.05

 4.00 Prom +  48597  48636   40                              -6.66
 4.01 Init +  50695  50856  162  0  0   56   99   111 0.645   8.73
 4.02 Term +  58528  58686  159  0  0   16   48   113 0.266  -1.96
 4.03 PlyA +  59440  59445    6                               1.05

 5.00 Prom +  60321  60360   40                              -4.86
 5.01 Init +  61214  61349  136  1  1   53   57    98 0.181   3.50
 5.02 Term +  72536  72615   80  0  2   66   44   100 0.169   1.33
 5.03 PlyA +  73595  73600    6                               1.05

 6.00 Prom +  73863  73902   40                              -5.46
 6.01 Sngl +  78295  78990  696  0  0  101   43   698 0.936  62.81
 6.02 PlyA +  79197  79202    6                               1.05

 7.00 Prom +  94239  94278   40                              -3.96
 7.01 Init +  99085  99223  139  0  1   56   58   200 0.962  12.10
 7.02 Intr +  99921 100172  252  1  0  -88   97   455 0.956  26.21
 7.03 Intr + 100259 100539  281  0  2   82   38   166 0.962   8.20
 7.04 Intr + 101069 101165   97  1  1   57   31    95 0.537   0.28
 7.05 Intr + 105087 105571  485  1  2  123  -22   429 0.214  28.14
 7.06 Intr + 107622 107707   86  2  2   66   75    90 0.121   4.12
 7.07 Intr + 109697 109847  151  2  1   39   96     7 0.089  -3.24
 7.08 Term + 110382 110528  147  2  0   18   34   140 0.418  -0.50
 7.09 PlyA + 110892 110897    6                               1.05

 8.03 PlyA - 112558 112553    6                               1.05
 8.02 Term - 126217 126150   68  2  2  106   41    18 0.438  -3.00
 8.01 Init - 129091 128923  169  1  1   58   60   175 0.703  11.40
 8.00 Prom - 130271 130232   40                              -5.56

 9.03 PlyA - 130799 130794    6                               1.05
 9.02 Term - 132510 132445   66  0  0  109   39   118 0.963   6.94
 9.01 Init - 146356 146276   81  1  0   42   75   111 0.192   4.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_1|189_aa
MGPGLLQASVPTVPHSPRQPCIQRGDLVDKAELSRSGPCRADDKPTTWPRIRHQVPAAAW
FCAAPRRVPDTEEFSMNTSGIREPMEIFIALFISLCEAAAVRVCTPSHGWLLAVLQPKQN
LSRAVLLKETAQGRWHGCMLEDPAKSRQAGYEASGADPLRQMGRQRHNLFHSANIWEQNG
LSTSAKYHP

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_1|570_bp
atgggccctggtcttcttcaggcctcggtgcccaccgtcccccactcccccagacagcca
tgcatccagagaggtgacctggtggacaaggcagagctctccaggtcaggcccctgcagg
gccgatgacaagcctaccacgtggcccagaataagacaccaggtgccagcagcagcctgg
ttctgcgcagcacctagaagagtgcccgacacagaggagttttccatgaatacttctgga
attcgcgaacccatggaaatcttcattgccctgttcatcagtctttgcgaggcagctgct
gtccgtgtgtgcacgccttctcatggctggttgctagctgtccttcagccaaaacagaac
ctttccagggctgtgctgctgaaggagacagctcaggggagatggcatggatgcatgctg
gaggatcctgcaaaatcccggcaagctggctatgaggccagcggtgctgaccctctacgc
cagatgggaaggcagagacacaatctgtttcactccgcaaacatctgggaacaaaatggt
ctgtccaccagtgcaaaataccacccctaa

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_2|144_aa
MRSHSSALGLLMGLGTMEQGAVLVGEARAAQEPMERDSAPFPLAVPVVCMGLAPITGSSG
HVTQAWPLKANCETFAGATRKRMCVSFGCIECRAWIAIVKEQVAPEPRNGESEGCWLELW
QQDGPCGDFGVEAVKGRDGKVAGA

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_2|435_bp
atgcgctcgcactcctcagcccttgggctgttgatgggactgggcaccatggagcagggg
gcggtgctcgttggggaggctcgggccgcacaggagcccatggagcgggattctgctcct
ttccctctggcagtccctgtggtctgtatggggctggccccaatcactggatccagcgga
cacgtcacccaggcctggccactgaaagccaattgtgagacttttgctggagcaaccagg
aaaagaatgtgtgtatcctttggatgcatagaatgcagagcatggattgcaatcgtgaag
gagcaggtagctccagaacccagaaatggagagagcgagggctgctggctggagctctgg
cagcaagatgggccatgtggggacttcggagtggaagctgtgaagggcagagacggcaag
gtagcaggagcttga

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_3|731_aa
MPGLTRDLINCGNKPYRCGARASFEGCKPHGNTEPADPAGEEDGRSARRHKARTERPGFR
RDSVVPGQLDLQSALVGRETPDARPPHPRGALRGLTGTQRRSGPGAAKRLGSAGSRRKNA
RARGGGEVIKGKKPASCLSPGAAVFAACRPNMAQEVSEYLSQNPRVAAWVEALRCDGETD
KHWRHRRDFLLRNAGDLAPAGGAASASTDEAADAESGTRNRQLQQLISFSMAWANHVFLG
CRYPQKVMDKILSMAEGIKVTDAPTYTTRDELVAKVKKRGISSSNEGVEEPSKKRVIEGK
NSSAVEQDHAKTSAKTERASAQQENSSTCIGSAIKSESGNSARSSGISSQNSSTSDGDRS
VSSQSSSSVSSQVTTAGSGKASEAEAPDKHGSASFVSLLKSSVNSHMTQSTDSRQQSGSP
KKSALEGSSASASQSSSEIEVPLLGSSGSSEVELPLLSSKPSSETASSGLTSKTSSEASV
SSSVAKNSSSSGTSLLTPKSSSSTNTSLLTSKSTSQVAASLLASKSSSQTSGSLVSKSTS
LASVSQLASKSSSQTSTSQLPSKSTSQSSESSVKFSCKLTNEDVKQKQPFFNRLYKTVAW
KLVAVGGFSPNVNHGELLNAAIEALKATLDVFFVPLKELADLPQNKSSQESIVCELRCKS
VYLGTGCGKSKENAKAVASREALKLFLKKKVVVKICKRKYRGSEIEDLVLLDEESRPVNL
PPALKHPQELL

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_3|2196_bp
atgcctggattaactagagacctaataaactgcgggaacaagccctaccgctgcggggcc
agggccagcttcgaaggctgcaagcctcacggcaacacggagccagctgacccggcgggg
gaggaggacggcaggagcgcgcggcgtcacaaagcgaggacagaacgcccggggttccgc
cgagactcggtcgtcccaggccagctcgacttgcagtccgccctcgtggggcgggagacg
cccgacgcccgcccacctcacccccggggtgccctccgtggcctcacggggacgcagcgt
cgcagcggccccggcgccgcaaagcgtcttgggagcgccggctcgcgccggaagaacgcg
agggcgcgcggcggcggcgaggttataaaagggaagaagccggcgtcctgcctgtctccc
ggtgcagctgtgttcgcggcctgcaggcccaacatggcgcaggaggtgtcggagtacctg
agccagaacccgcgggtggcagcctgggtggaggcgctgcgctgcgacggcgagactgac
aaacactggcgccaccgccgggattttttgcttcgcaacgccggggacctggcccccgct
ggcggcgctgcctccgctagcacggatgaagctgccgacgccgagagcgggacccgaaac
cggcagctgcagcagctcatctccttttccatggcctgggcgaaccacgtcttcctcggg
tgccgataccctcaaaaagttatggataaaatacttagtatggctgaaggcatcaaagtg
acagatgctccaacctatacaacaagagatgaactggttgccaaggtgaagaaaagaggg
atatcgagtagcaatgaaggggtagaagagccatccaaaaaacgagttatagaaggaaaa
aacagttctgcagttgagcaagatcacgcaaaaacctctgccaagacagaacgtgcatca
gctcagcaggaaaacagttcaacgtgtatagggtcggccatcaaatcagagagtgggaac
tcagctcggagctctggcatctccagtcagaatagctctacaagtgatggagatcgatct
gtttccagccaaagcagcagcagcgtttcctctcaggtaacaacggcaggatctgggaaa
gcttctgaagcagaagctccagataaacacggttctgcatcatttgtttccttgctgaaa
tccagtgtgaatagtcacatgacccaatccactgattctagacaacaaagtggatcacct
aaaaagagtgctttggaaggctcttcagcctcagcttctcaaagcagctcagagatcgag
gtgcccttgttgggctcctcaggaagctcagaggtagaattgccactattgtcttccaaa
cctagttcagagacagcttcaagtgggttaacttccaaaactagttcagaggcaagtgtt
tcatcatcagttgctaaaaacagttcctcatcaggcacatccttactgactcccaagagc
agctcttcaacaaatacatcgctgctaacttccaagagcacttcccaggtagctgcatca
ctactagcttccaagagcagctcccagaccagtggatctctggtttccaaaagcacttcc
ttagcaagtgtgtcccagttggcttctaagagtagttctcagactagcacctcacagttg
ccttctaaaagtacttcacagtcaagtgagagttctgtcaaattctcttgcaagttaacc
aatgaagatgtgaaacagaagcaaccttttttcaatagactatataaaacggtggcatgg
aagttggtagctgttggtggctttagtcccaatgtgaatcatggagagctcctaaatgca
gctattgaggctctgaaagcaacactggatgtattttttgtcccactaaaagaattggca
gatctgcctcaaaataagagctctcaagaaagtattgtttgtgaattgaggtgcaagtct
gtgtatttgggcactggctgtggaaaaagcaaagaaaatgcaaaagcagttgcatcaaga
gaagcattgaagttatttctcaagaaaaaggtggtggtaaaaatatgtaaaaggaaatac
agaggcagtgaaatagaagatctagtactccttgatgaagaatcgaggcctgtaaactta
cctccagcactaaaacatcctcaagaattactataa

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_4|106_aa
MLVPSHNGFPPPGSCGFHSTGLQAAITSSQSNSLLPMLPIWAAFSPDVYRLKPLSCKPLK
VCPDLVPSGGFLVSLTSRMKLRTFTASVTTFKGGVDPKSQQQQDLL

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_4|321_bp
atgctggtgccctcccacaacggatttcctccccctggttcctgtggttttcattctact
ggtctccaagctgccatcacatccagccaaagcaactctttgctgccaatgctgccaata
tgggcagctttttcaccagatgtctatcgattaaaaccactgagttgtaagcccttaaaa
gtgtgtccagacttggttccctctggtggattcttggtctcactgacttcgagaatgaag
ctgcggaccttcacagcgagtgttacaacttttaaaggtggtgtggacccaaagagtcag
cagcagcaagatttactgtga

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_5|71_aa
MWESLEPPRDLLNGFFQNADSDIDNKIQAEVVSDGDKELVGNWSKGREKQPLSLEMEVYR
DAAAGINLIFP

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_5|216_bp
atgtgggaaagtttggaacctcctagagacttgttgaatggctttttccaaaatgctgat
agcgatatagacaataagatccaggctgaggtggtgtcagatggagataaggaacttgtt
gggaactggagcaaaggaagggaaaaacagcctttatctctggagatggaggtgtaccgg
gatgcggctgcgggaattaaccttatcttcccatga

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_6|231_aa
MATSAASSERFKKLHEIFRGLHEDLQGVPEQLLGTAGTEENKSIRDFDEKQQEANEMLAG
MEEELRYAPLSFHNTMTSKLRNYRKDLAKLHREVRSTPLTATPGGRGDMKYDIYAVENEH
MNRLQSQRAMLLQGPENLNRATQSIERSHQIATETDQIGSETIEELGEQRDHLERTKSRL
INTTENLSKSRKILRSMSRKVTTNKLLFSIIILLELAVLGGLVYYRFFRNH

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_6|696_bp
atggccacctccgccgcctcctccgagcgtttcaagaagctgcacgaaatcttccgcggc
ctccacgaagacctacaaggggtgcccgagcagctgctggggacggcggggaccgaagag
aataagtcgatcagggattttgatgaaaagcaacaggaagcaaatgaaatgctggcaggg
atggaggaggagctacgttatgcacccctgtctttccataacaccatgacgtctaagctt
cgaaactaccggaaggaccttgccaaactccatcgggaggtgagaagcacgcctttgaca
gccacaccaggagggcgaggagacatgaaatatgacatatatgctgtagagaatgagcat
atgaatcggctacagtctcaaagggcaatgcttctgcaaggtcctgaaaacctgaaccgg
gccacccaaagtattgaacgttctcatcagattgccacggagactgaccagattggctca
gaaaccatagaagagctgggggaacaacgagaccatttagaacgcaccaagagtagactg
ataaacacaactgaaaacttgagcaaaagtcgaaagattctccgttcaatgtccagaaaa
gtgacaaccaacaagctgctgttttccatcatcatcttactggagctcgccgtcctggga
ggcctggtttactacagattctttcgcaaccattga

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_7|545_aa
MPGAARRPPGRAVPQASLQVVRKGTACCSFAGSRGAALGPPDGEKAAEGPRRPRPVHVRL
LDAEAAATARIGRMLGQQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVS
VLRELDNKYQVSPSAPRVCRAGLGGLETGLAALRGPAVGEYFSGVPRVGVGAACQPPLQT
QRLQLPLRGISHFKQQAFVQALARPVPQTLRPRPGTAAGQGSEGSMDQDGDQQLGPSRIL
APRRFRDMCHFRASGGKTLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKI
QIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESR
DLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQMG
EKKRLPNRNAKVWIRLDGKTNLENPGREGSTFIHLLKYLLCTYLQGIVCTGDKAVTKMRQ
SVTLWSLDSGVNGAYMQRNHSSFIVSYFNAREVVWTKIPEMWTQPVILDRSLVLFGLQFV
QLENG

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_7|1638_bp
atgccgggagccgcacgccgcccgccggggcgcgcagtcccgcaggcctcgctccaggtc
gtccgaaaaggaaccgcctgctgctcctttgcaggctcgcgaggagccgcactcggaccg
cctgatggggaaaaagccgctgagggcccgcggcggccgcggccggtgcatgtgcggctg
ctggatgcggaggcggcggcgacggcgcggatcggcaggatgttagggcagcagcagcag
caactgtactcgtcggccgcgctcctgaccggggagcggagccggctgctcacctgctac
gtgcaggactaccttgagtgcgtggagtcgctgccccacgacatgcagaggaacgtgtct
gtgctgcgagagctggacaacaaatatcaagtctccccgagcgcaccgagggtctgccga
gcgggactgggaggactggagaccgggttggcggccctccgtggccccgcggtgggcgag
tacttctctggggtccccagagtgggggtgggggccgcttgtcagcccccgctgcagacc
cagcggctgcagctgccgctgaggggaatcagccattttaagcagcaagcatttgttcag
gcgctggcccgccccgtgccgcagaccctgcggccccggcccgggactgcagccgggcaa
gggtcggagggatcaatggatcaggacggcgatcagcagctcggaccgtcgcggatcctg
gctccgcgtaggttccgggacatgtgtcacttccgggcttcaggaggaaaaacgttaaag
gaaattgatgatgtctacgaaaaatataagaaagaagatgatttaaaccagaagaaacgt
ctacagcagcttctccagagagcactaattaatagtcaagaattgggagatgaaaaaata
cagattgttacacaaatgctcgaattggtggaaaatcgggcaagacaaatggagttacac
tcacagtgtttccaagatcctgctgaaagtgaacgagcctcagataaagcaaagatggat
tccagccaaccagaaagatcttcaagaagaccccgcaggcagcggaccagtgaaagccgt
gatttatgtcacatggcaaatgggattgaagactgtgatgatcagccacctaaagaaaag
aaatccaagtcagcaaagaaaaagaaacgctccaaggccaagcaggaaagggaagcttca
cctgttgagtttgcaatagatcctaatgaacctacatactgcttatgcaaccaaatggga
gaaaagaaacgacttcctaatagaaatgccaaagtttggattagacttgacgggaaaacg
aacctggaaaatcctggaagggagggcagcacttttattcacttactcaaatatttattg
tgcacctatttgcaaggcatcgtttgtactggggataaagcagtgaccaaaatgagacaa
tctgtaaccttgtggagcttagattctggagtgaatggggcgtatatgcagagaaaccac
agctccttcatcgtctcctatttcaatgcgagggaagtggtctggaccaagattccagag
atgtggactcaacctgtgatcttggacaggtcacttgtcctctttggcctgcagtttgtt
cagctggaaaatggctga

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_8|78_aa
MEANNFKVPGNMDNSSLGGGAGMETARRLDDDSHFAGGAAENATTAGRERRRLNLGDVTS
REISFDLRVNIFGKNLHR

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_8|237_bp
atggaagccaacaacttcaaggtccctggaaacatggacaacagcagcctcggaggagga
gcggggatggaaactgctcggcggttagatgatgacagtcactttgctggaggagcagca
gagaacgcgaccacggctggaagggaaagaagacgactgaatctgggggatgttacatct
agagagatctcatttgacttaagagtcaacatttttggcaaaaatcttcataggtga

>gi568815594f:183405196_183610949|GENSCAN_predicted_peptide_9|48_aa
MVALPSPLRSLSSLLPPGLVLPNTAAQPTQHEADEDEDRYDDPLPLNE

>gi568815594f:183405196_183610949|GENSCAN_predicted_CDS_9|147_bp
atggttgccctaccttccccgctgcgctccctgagctctctcctgccccctgggcttgtg
ctacctaatacagcagcacagcctactcaacatgaagctgacgaggatgaagaccgttat
gatgatccacttccacttaatgaatag