Result of FASTA (ccds) for pF1KB3719
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3719, 866 aa
  1>>>pF1KB3719 866 - 866 aa - 866 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2095+/-0.000745; mu= 12.8660+/- 0.045
 mean_var=128.5005+/-25.676, 0's: 0 Z-trim(112.7): 15  B-trim: 0 in 0/51
 Lambda= 0.113141
 statistics sampled from 13429 (13443) to 13429 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.413), width:  16
 Scan time:  4.400

The best scores are:                                      opt bits E(32554)
CCDS13739.1 IL17RA gene_id:23765|Hs108|chr22       ( 866) 6026 995.2       0
CCDS77645.1 IL17RA gene_id:23765|Hs108|chr22       ( 832) 3564 593.3 5.9e-169
CCDS82790.1 IL17RD gene_id:54756|Hs108|chr3        ( 595)  394 75.8 2.6e-13
CCDS2880.2 IL17RD gene_id:54756|Hs108|chr3         ( 739)  394 75.8 3.1e-13


>>CCDS13739.1 IL17RA gene_id:23765|Hs108|chr22            (866 aa)
 initn: 6026 init1: 6026 opt: 6026  Z-score: 5318.4  bits: 995.2 E(32554):    0
Smith-Waterman score: 6026; 100.0% identity (100.0% similar) in 866 aa overlap (1-866:1-866)

               10        20        30        40        50        60
pF1KB3 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
              790       800       810       820       830       840

              850       860      
pF1KB3 RQLLFRQLQKNSGWDTMGSESEGPSA
       ::::::::::::::::::::::::::
CCDS13 RQLLFRQLQKNSGWDTMGSESEGPSA
              850       860      

>>CCDS77645.1 IL17RA gene_id:23765|Hs108|chr22            (832 aa)
 initn: 3564 init1: 3564 opt: 3564  Z-score: 3146.8  bits: 593.3 E(32554): 5.9e-169
Smith-Waterman score: 5711; 96.1% identity (96.1% similar) in 866 aa overlap (1-866:1-832)

               10        20        30        40        50        60
pF1KB3 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
       ::::::::::::::                                  ::::::::::::
CCDS77 VSCPEMPDTPEPIP----------------------------------GPGSEKYSDDTK
              310                                         320      

              370       380       390       400       410       420
pF1KB3 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
        330       340       350       360       370       380      

              430       440       450       460       470       480
pF1KB3 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
        390       400       410       420       430       440      

              490       500       510       520       530       540
pF1KB3 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
        450       460       470       480       490       500      

              550       560       570       580       590       600
pF1KB3 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
        510       520       530       540       550       560      

              610       620       630       640       650       660
pF1KB3 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
        570       580       590       600       610       620      

              670       680       690       700       710       720
pF1KB3 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
        630       640       650       660       670       680      

              730       740       750       760       770       780
pF1KB3 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
        690       700       710       720       730       740      

              790       800       810       820       830       840
pF1KB3 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
        750       760       770       780       790       800      

              850       860      
pF1KB3 RQLLFRQLQKNSGWDTMGSESEGPSA
       ::::::::::::::::::::::::::
CCDS77 RQLLFRQLQKNSGWDTMGSESEGPSA
        810       820       830  

>>CCDS82790.1 IL17RD gene_id:54756|Hs108|chr3             (595 aa)
 initn: 305 init1: 145 opt: 394  Z-score: 352.5  bits: 75.8 E(32554): 2.6e-13
Smith-Waterman score: 401; 25.8% identity (51.2% similar) in 570 aa overlap (225-768:62-582)

          200       210       220       230       240       250    
pF1KB3 PCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHMENHSCFEHMH-HIP
                                     : : : . . .:: :  ..  :. .. :  
CCDS82 HPFFFRTRACDLLLQPDNLACKPFWKPRNLNISQHGSDMQVSFDHAPHNFGFRFFYLHYK
              40        50        60        70        80        90 

           260       270       280       290       300       310   
pF1KB3 APRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSATVSCPEMPDTPEPI
         .   :....       .  .:  ..:.   ..   ..:    ..: .  ..   :   
CCDS82 LKHEGPFKRKTCKQEQTTETTSCLLQNVSPGDYIIELVDDT---NTTRKVMHYALKPVHS
             100       110       120       130          140        

           320       330       340       350          360       370
pF1KB3 PDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGS---EKYSDDTKYTDGLPAADL
       :   :. .  . . . .. . .... ..:   .  .  :   :. :... :: .::   :
CCDS82 PWAGPIRAVAITVPLVVISAFATLFTVMCRKKQQENIYSHLDEESSESSTYTAALPRERL
      150       160       170       180       190       200        

              380        390       400       410       420         
pF1KB3 IPPPLKPRKVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWV
        : :    ::.. ::. :   ...::  :: ::   :: :::::: :. .. . :   ::
CCDS82 RPRP----KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWV
      210           220       230       240       250       260    

     430       440       450       460       470       480         
pF1KB3 GRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFTAAMNMILPD
           :.. ::.  :::.::.: .     .. .    .    .:.  :.:: .:.. :   
CCDS82 ---IQKIHESQF-IIVVCSKGMKY----FVDKKNYKHKGGGRGSGKGELFLVAVSAIAEK
             270        280           290       300       310      

     490            500       510       520       530         540  
pF1KB3 FKRP-----ACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEV--YFRIQDLEMF
       ...      : .. ... :: . ::.:::: ..  . .: ::: . ..  ... .:  . 
CCDS82 LRQAKQSSSAALSKFIAVYF-DYSCEGDVPGILDLSTKYRLMDNLPQLCSHLHSRDHGLQ
        320       330        340       350       360       370     

            550       560       570       580       590       600  
pF1KB3 QPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPSLD
       .::.  : :  :  ::.:: .::.: .:.  ....  . ::::: . .        : : 
CCDS82 EPGQHTRQG--SRRNYFRSKSGRSLYVAICNMHQFIDEEPDWFEKQFV----PFHPPPLR
         380         390       400       410       420             

            610        620        630       640       650       660
pF1KB3 EEVFEEPLLPP-GTGIVKRAPLVRE-PGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
          ..::.:    .:.:    . .  : :. :: ..        :::      :   : :
CCDS82 ---YREPVLEKFDSGLVLNDVMCKPGPESDFCLKVE--------AAV------LGATG-P
        430       440       450       460                     470  

              670       680       690       700       710          
pF1KB3 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPG-AGRNSVLF-
       : .  :     ...:.:    :  :  ::.:.   :    .:    :::.   :.: .. 
CCDS82 ADSQ-H----ESQHGGLDQDGEARPALDGSAALQPLLHTVKA----GSPSDMPRDSGIYD
                  480       490       500           510       520  

        720         730       740             750       760        
pF1KB3 --LPVDPEDSPL--GSSTPMASPDLLPEDVR------EHLEGLMLSLFEQSLSCQAQGGC
         .: .  . ::  : :: ..  . : :.:       :.    . : . .: ::.:. ::
CCDS82 SSVPSSELSLPLMEGLSTDQTETSSLTESVSSSSGLGEEEPPALPSKLLSSGSCKADLGC
            530       540       550       560       570       580  

      770       780       790       800       810       820        
pF1KB3 SRPAMVLTDPHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPL
                                                                   
CCDS82 RSYTDELHAVAPL                                               
            590                                                    

>>CCDS2880.2 IL17RD gene_id:54756|Hs108|chr3              (739 aa)
 initn: 305 init1: 145 opt: 394  Z-score: 351.1  bits: 75.8 E(32554): 3.1e-13
Smith-Waterman score: 405; 23.6% identity (50.3% similar) in 755 aa overlap (47-768:52-726)

         20        30        40         50        60         70    
pF1KB3 GLLLLLLGVLAPGGASLRLLDHRALVCSQPGL-NCTVKNSTCLDDSWIHPRNL-TPSSPK
                                     :: : : : ..:   ....: .  . .. .
CCDS28 QLAVAAGGSGRARGADTCGWRGVGPASRNSGLYNITFKYDNC--TTYLNPVGKHVIADAQ
              30        40        50        60          70         

           80        90       100       110       120       130    
pF1KB3 DLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLNTNERLCVRFEFLSK
       .. :. .  : :      .. : :.     .: .:.: .. . .:... : : .. .:. 
CCDS28 NITISQYACHDQ-----VAVTILWS-PGALGIEFLKGFRVILEELKSEGRQCQQL-ILKD
      80        90             100       110       120        130  

          140         150       160       170       180       190  
pF1KB3 LRHHHRRWRFT--FSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNFLVPDCEHARMKV
        .. .  .. :   :.  ..   : .  :. .: :   .. :..   : .  :.   . .
CCDS28 PKQLNSSFKRTGMESQPFLNMKFETDYFVKVVPFPSIKNESNYHPFFFRTRACD---LLL
            140       150       160       170       180            

            200        210       220       230       240       250 
pF1KB3 TTPCMSSGSLWDP-NITVETLEAHQLRVSFTLWNESTHYQILLTSFPHMENHSCFEHMH-
           ..   .: : :...                 : : . . .:: :  ..  :. .. 
CCDS28 QPDNLACKPFWKPRNLNI-----------------SQHGSDMQVSFDHAPHNFGFRFFYL
     190       200                        210       220       230  

              260       270       280       290       300       310
pF1KB3 HIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSATVSCPEMPDTP
       :    .   :....       .  .:  ..:.   ..   ..:    ..: .  ..   :
CCDS28 HYKLKHEGPFKRKTCKQEQTTETTSCLLQNVSPGDYIIELVDDT---NTTRKVMHYALKP
            240       250       260       270          280         

              320       330       340       350          360       
pF1KB3 EPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGS---EKYSDDTKYTDGLPA
          :   :. .  . . . .. . .... ..:   .  .  :   :. :... :: .:: 
CCDS28 VHSPWAGPIRAVAITVPLVVISAFATLFTVMCRKKQQENIYSHLDEESSESSTYTAALPR
     290       300       310       320       330       340         

       370       380        390       400       410       420      
pF1KB3 ADLIPPPLKPRKVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVM
         : : :    ::.. ::. :   ...::  :: ::   :: :::::: :. .. . :  
CCDS28 ERLRPRP----KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQR
     350           360       370       380       390       400     

        430       440       450         460       470       480    
pF1KB3 TWVGRQKQEMVESNSKIIVLCSRGTR--AKWQALLGRGAPVRLRCDHGKPVGDLFTAAMN
        ::    :.. ::.  :::.::.: .  .  .    .:.       .:.  :.:: .:..
CCDS28 EWV---IQKIHESQF-IIVVCSKGMKYFVDKKNYKHKGG------GRGSGKGELFLVAVS
            410        420       430       440             450     

          490            500       510       520       530         
pF1KB3 MILPDFKRP-----ACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEV--YFRIQ
        :   ...      : .. ... :: . ::.:::: ..  . .: ::: . ..  ... .
CCDS28 AIAEKLRQAKQSSSAALSKFIAVYF-DYSCEGDVPGILDLSTKYRLMDNLPQLCSHLHSR
         460       470       480        490       500       510    

       540       550       560       570       580       590       
pF1KB3 DLEMFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQD
       :  . .::.  : :  :  ::.:: .::.: .:.  ....  . ::::: . .       
CCDS28 DHGLQEPGQHTRQG--SRRNYFRSKSGRSLYVAICNMHQFIDEEPDWFEKQFV----PFH
          520         530       540       550       560            

       600       610        620        630       640       650     
pF1KB3 APSLDEEVFEEPLLPP-GTGIVKRAPLVRE-PGSQACLAIDPLVGEEGGAAVAKLEPHLQ
        : :    ..::.:    .:.:    . .  : :. :: ..        :::      : 
CCDS28 PPPLR---YREPVLEKFDSGLVLNDVMCKPGPESDFCLKVE--------AAV------LG
      570          580       590       600                     610 

         660       670       680       690       700       710     
pF1KB3 PRGQPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPG-AGRN
         : :: .  :     ...:.:    :  :  ::.:.   :    .:    :::.   :.
CCDS28 ATG-PADSQ-HE----SQHGGLDQDGEARPALDGSAALQPLLHTVKA----GSPSDMPRD
               620           630       640       650           660 

             720         730       740             750       760   
pF1KB3 SVLF---LPVDPEDSPL--GSSTPMASPDLLPEDVR------EHLEGLMLSLFEQSLSCQ
       : ..   .: .  . ::  : :: ..  . : :.:       :.    . : . .: ::.
CCDS28 SGIYDSSVPSSELSLPLMEGLSTDQTETSSLTESVSSSSGLGEEEPPALPSKLLSSGSCK
             670       680       690       700       710       720 

           770       780       790       800       810       820   
pF1KB3 AQGGCSRPAMVLTDPHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGK
       :. ::                                                       
CCDS28 ADLGCRSYTDELHAVAPL                                          
             730                                                   




866 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:38:04 2016 done: Fri Nov  4 23:38:05 2016
 Total Scan time:  4.400 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
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