Result of FASTA (omim) for pF1KE0342
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0342, 625 aa
  1>>>pF1KE0342 625 - 625 aa - 625 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0705+/-0.000293; mu= 17.7060+/- 0.019
 mean_var=111.6657+/-23.941, 0's: 0 Z-trim(120.2): 48  B-trim: 2033 in 2/57
 Lambda= 0.121371
 statistics sampled from 34982 (35071) to 34982 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.411), width:  16
 Scan time: 11.280

The best scores are:                                      opt bits E(85289)
NP_892029 (OMIM: 611151) tRNA (uracil-5-)-methyltr ( 625) 4263 757.2 3.8e-218
NP_073564 (OMIM: 611151) tRNA (uracil-5-)-methyltr ( 625) 4263 757.2 3.8e-218
NP_001244923 (OMIM: 611151) tRNA (uracil-5-)-methy ( 562) 3718 661.7 1.9e-189
NP_001317968 (OMIM: 611151) tRNA (uracil-5-)-methy ( 643) 3085 550.9 4.8e-156
XP_011528441 (OMIM: 611151) PREDICTED: tRNA (uraci ( 643) 3085 550.9 4.8e-156
XP_011528444 (OMIM: 611151) PREDICTED: tRNA (uraci ( 317) 1181 217.3 6.6e-56
XP_011528443 (OMIM: 611151) PREDICTED: tRNA (uraci ( 317) 1181 217.3 6.6e-56


>>NP_892029 (OMIM: 611151) tRNA (uracil-5-)-methyltransf  (625 aa)
 initn: 4263 init1: 4263 opt: 4263  Z-score: 4037.4  bits: 757.2 E(85289): 3.8e-218
Smith-Waterman score: 4263; 100.0% identity (100.0% similar) in 625 aa overlap (1-625:1-625)

               10        20        30        40        50        60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
              550       560       570       580       590       600

              610       620     
pF1KE0 HSPPAQPTPGPPDNTLQETGTFPSS
       :::::::::::::::::::::::::
NP_892 HSPPAQPTPGPPDNTLQETGTFPSS
              610       620     

>>NP_073564 (OMIM: 611151) tRNA (uracil-5-)-methyltransf  (625 aa)
 initn: 4263 init1: 4263 opt: 4263  Z-score: 4037.4  bits: 757.2 E(85289): 3.8e-218
Smith-Waterman score: 4263; 100.0% identity (100.0% similar) in 625 aa overlap (1-625:1-625)

               10        20        30        40        50        60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
              550       560       570       580       590       600

              610       620     
pF1KE0 HSPPAQPTPGPPDNTLQETGTFPSS
       :::::::::::::::::::::::::
NP_073 HSPPAQPTPGPPDNTLQETGTFPSS
              610       620     

>>NP_001244923 (OMIM: 611151) tRNA (uracil-5-)-methyltra  (562 aa)
 initn: 3718 init1: 3718 opt: 3718  Z-score: 3522.2  bits: 661.7 E(85289): 1.9e-189
Smith-Waterman score: 3718; 100.0% identity (100.0% similar) in 549 aa overlap (1-549:1-549)

               10        20        30        40        50        60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
       :::::::::                                                   
NP_001 RAAMGNFVDAPLFPPQPLQSPI                                      
              550       560                                        

>>NP_001317968 (OMIM: 611151) tRNA (uracil-5-)-methyltra  (643 aa)
 initn: 3085 init1: 3085 opt: 3085  Z-score: 2922.4  bits: 550.9 E(85289): 4.8e-156
Smith-Waterman score: 4217; 97.2% identity (97.2% similar) in 643 aa overlap (1-625:1-643)

               10        20        30        40        50        60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
              370       380       390       400       410       420

              430       440       450                         460  
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVIGVEL
       ::::::::::::::::::::::::::::::::                  ::::::::::
NP_001 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVIGVEL
              430       440       450       460       470       480

            470       480       490       500       510       520  
pF1KE0 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
              490       500       510       520       530       540

            530       540       550       560       570       580  
pF1KE0 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
              550       560       570       580       590       600

            590       600       610       620     
pF1KE0 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
       :::::::::::::::::::::::::::::::::::::::::::
NP_001 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
              610       620       630       640   

>>XP_011528441 (OMIM: 611151) PREDICTED: tRNA (uracil-5-  (643 aa)
 initn: 3085 init1: 3085 opt: 3085  Z-score: 2922.4  bits: 550.9 E(85289): 4.8e-156
Smith-Waterman score: 4217; 97.2% identity (97.2% similar) in 643 aa overlap (1-625:1-643)

               10        20        30        40        50        60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
              370       380       390       400       410       420

              430       440       450                         460  
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVIGVEL
       ::::::::::::::::::::::::::::::::                  ::::::::::
XP_011 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVIGVEL
              430       440       450       460       470       480

            470       480       490       500       510       520  
pF1KE0 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
              490       500       510       520       530       540

            530       540       550       560       570       580  
pF1KE0 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
              550       560       570       580       590       600

            590       600       610       620     
pF1KE0 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
       :::::::::::::::::::::::::::::::::::::::::::
XP_011 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
              610       620       630       640   

>>XP_011528444 (OMIM: 611151) PREDICTED: tRNA (uracil-5-  (317 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1124.7  bits: 217.3 E(85289): 6.6e-56
Smith-Waterman score: 1981; 94.3% identity (94.3% similar) in 317 aa overlap (327-625:1-317)

        300       310       320       330       340       350      
pF1KE0 RSTPYSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAG
                                     ::::::::::::::::::::::::::::::
XP_011                               MAIAYFHPQKLSPEELAELKTSLAQHFTAG
                                             10        20        30

        360       370       380       390       400       410      
pF1KE0 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
               40        50        60        70        80        90

        420       430       440       450                          
pF1KE0 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVI
       ::::::::::::::::::::::::::::::::::::                  ::::::
XP_011 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVI
              100       110       120       130       140       150

      460       470       480       490       500       510        
pF1KE0 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
              160       170       180       190       200       210

      520       530       540       550       560       570        
pF1KE0 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
              220       230       240       250       260       270

      580       590       600       610       620     
pF1KE0 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
       :::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
              280       290       300       310       

>>XP_011528443 (OMIM: 611151) PREDICTED: tRNA (uracil-5-  (317 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1124.7  bits: 217.3 E(85289): 6.6e-56
Smith-Waterman score: 1981; 94.3% identity (94.3% similar) in 317 aa overlap (327-625:1-317)

        300       310       320       330       340       350      
pF1KE0 RSTPYSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAG
                                     ::::::::::::::::::::::::::::::
XP_011                               MAIAYFHPQKLSPEELAELKTSLAQHFTAG
                                             10        20        30

        360       370       380       390       400       410      
pF1KE0 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
               40        50        60        70        80        90

        420       430       440       450                          
pF1KE0 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVI
       ::::::::::::::::::::::::::::::::::::                  ::::::
XP_011 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVI
              100       110       120       130       140       150

      460       470       480       490       500       510        
pF1KE0 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
              160       170       180       190       200       210

      520       530       540       550       560       570        
pF1KE0 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
              220       230       240       250       260       270

      580       590       600       610       620     
pF1KE0 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
       :::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
              280       290       300       310       




625 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 15:05:08 2016 done: Thu Nov  3 15:05:10 2016
 Total Scan time: 11.280 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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