Result of FASTA (ccds) for pF1KB8297
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8297, 191 aa
  1>>>pF1KB8297 191 - 191 aa - 191 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0295+/-0.000991; mu= 15.1542+/- 0.060
 mean_var=84.4013+/-16.462, 0's: 0 Z-trim(106.3): 91  B-trim: 4 in 1/49
 Lambda= 0.139605
 statistics sampled from 8786 (8891) to 8786 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.273), width:  16
 Scan time:  1.850

The best scores are:                                      opt bits E(32554)
CCDS441.1 HPCAL4 gene_id:51440|Hs108|chr1          ( 191) 1275 266.3 8.2e-72
CCDS1689.1 VSNL1 gene_id:7447|Hs108|chr2           ( 191) 1181 247.3 4.1e-66
CCDS1671.1 HPCAL1 gene_id:3241|Hs108|chr2          ( 193)  899 190.6 5.2e-49
CCDS370.1 HPCA gene_id:3208|Hs108|chr1             ( 193)  898 190.4   6e-49
CCDS6292.1 NCALD gene_id:83988|Hs108|chr8          ( 193)  890 188.7 1.8e-48
CCDS6932.1 NCS1 gene_id:23413|Hs108|chr9           ( 190)  746 159.7 9.7e-40
CCDS78448.1 NCS1 gene_id:23413|Hs108|chr9          ( 172)  654 141.2 3.4e-34
CCDS11151.1 RCVRN gene_id:5957|Hs108|chr17         ( 200)  609 132.2   2e-31
CCDS64313.1 KCNIP1 gene_id:30820|Hs108|chr5        ( 188)  555 121.3 3.7e-28
CCDS4374.1 KCNIP1 gene_id:30820|Hs108|chr5         ( 216)  555 121.3   4e-28
CCDS7524.1 KCNIP2 gene_id:30819|Hs108|chr10        ( 220)  555 121.3 4.1e-28
CCDS7525.1 KCNIP2 gene_id:30819|Hs108|chr10        ( 225)  555 121.3 4.2e-28
CCDS34285.1 KCNIP1 gene_id:30820|Hs108|chr5        ( 225)  555 121.3 4.2e-28
CCDS34286.1 KCNIP1 gene_id:30820|Hs108|chr5        ( 227)  555 121.3 4.2e-28
CCDS41562.1 KCNIP2 gene_id:30819|Hs108|chr10       ( 252)  555 121.4 4.5e-28
CCDS7522.1 KCNIP2 gene_id:30819|Hs108|chr10        ( 270)  555 121.4 4.7e-28
CCDS7521.1 KCNIP2 gene_id:30819|Hs108|chr10        ( 285)  555 121.4 4.9e-28
CCDS47035.1 KCNIP4 gene_id:80333|Hs108|chr4        ( 188)  543 118.8   2e-27
CCDS43215.1 KCNIP4 gene_id:80333|Hs108|chr4        ( 216)  543 118.9 2.2e-27
CCDS43217.1 KCNIP4 gene_id:80333|Hs108|chr4        ( 225)  543 118.9 2.2e-27
CCDS3428.1 KCNIP4 gene_id:80333|Hs108|chr4         ( 229)  543 118.9 2.3e-27
CCDS43216.1 KCNIP4 gene_id:80333|Hs108|chr4        ( 250)  543 119.0 2.4e-27
CCDS7523.1 KCNIP2 gene_id:30819|Hs108|chr10        ( 227)  537 117.7 5.2e-27
CCDS33245.1 KCNIP3 gene_id:30818|Hs108|chr2        ( 230)  522 114.7 4.2e-26
CCDS2013.1 KCNIP3 gene_id:30818|Hs108|chr2         ( 256)  522 114.7 4.6e-26
CCDS4865.1 GUCA1B gene_id:2979|Hs108|chr6          ( 200)  494 109.0 1.9e-24
CCDS72761.1 HPCAL4 gene_id:51440|Hs108|chr1        ( 119)  446 99.1 1.1e-21
CCDS4864.1 GUCA1A gene_id:2978|Hs108|chr6          ( 201)  413 92.7 1.6e-19
CCDS64312.1 KCNIP1 gene_id:30820|Hs108|chr5        ( 241)  381 86.3 1.5e-17
CCDS2954.1 GUCA1C gene_id:9626|Hs108|chr3          ( 209)  350 80.0 1.1e-15
CCDS7526.1 KCNIP2 gene_id:30819|Hs108|chr10        ( 184)  273 64.5 4.5e-11


>>CCDS441.1 HPCAL4 gene_id:51440|Hs108|chr1               (191 aa)
 initn: 1275 init1: 1275 opt: 1275  Z-score: 1402.7  bits: 266.3 E(32554): 8.2e-72
Smith-Waterman score: 1275; 100.0% identity (100.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
              130       140       150       160       170       180

              190 
pF1KB8 IVLLLQCDMQK
       :::::::::::
CCDS44 IVLLLQCDMQK
              190 

>>CCDS1689.1 VSNL1 gene_id:7447|Hs108|chr2                (191 aa)
 initn: 1181 init1: 1181 opt: 1181  Z-score: 1300.4  bits: 247.3 E(32554): 4.1e-66
Smith-Waterman score: 1181; 89.5% identity (99.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
       ::: ::::::::.::::..:::.:.:::::::::::::::: ::::::::::.:::::::
CCDS16 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
       ::::::::::::::::::::::::::::::.::::::::::::::.::::::::.:::.:
CCDS16 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::::::::::::::::::.::.:::::.:::::::.:::..:::::::.:::::::::::
CCDS16 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
              130       140       150       160       170       180

              190 
pF1KB8 IVLLLQCDMQK
       ::::::::.::
CCDS16 IVLLLQCDIQK
              190 

>>CCDS1671.1 HPCAL1 gene_id:3241|Hs108|chr2               (193 aa)
 initn: 722 init1: 708 opt: 899  Z-score: 993.4  bits: 190.6 E(32554): 5.2e-49
Smith-Waterman score: 899; 68.6% identity (89.9% similar) in 188 aa overlap (1-188:1-186)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
       ::: :::: ::::.:: .::::...::..::::::::::.: :...::...: .::::::
CCDS16 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANFFPYGD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
       :::::.:.::::: :::::::::::: ::::::::..::::.::: ::::::.: :.: :
CCDS16 ASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::::..::::::..:  :.: .:  ::..:.::::..:: ..: ...:::: ..::::::
CCDS16 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIRGAKSDPS
              130         140       150       160       170        

              190     
pF1KB8 IVLLLQCDMQK    
       :: :::::       
CCDS16 IVRLLQCDPSSASQF
      180       190   

>>CCDS370.1 HPCA gene_id:3208|Hs108|chr1                  (193 aa)
 initn: 729 init1: 713 opt: 898  Z-score: 992.3  bits: 190.4 E(32554): 6e-49
Smith-Waterman score: 898; 69.1% identity (88.8% similar) in 188 aa overlap (1-188:1-186)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
       ::: :::: ::.:.:: .:::::: ::..::::::::::.::::..::...: .::::::
CCDS37 MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
       :::::.:.::::: :.:::::::::: :::::::: .:::: ::: ::::::.: :.: :
CCDS37 ASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::::..::::::..:  :.: .:  ::..:..:::..:: ..: ...:::: ..::::::
CCDS37 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPS
              130         140       150       160       170        

              190     
pF1KB8 IVLLLQCDMQK    
       :: :::::       
CCDS37 IVRLLQCDPSSASQF
      180       190   

>>CCDS6292.1 NCALD gene_id:83988|Hs108|chr8               (193 aa)
 initn: 716 init1: 702 opt: 890  Z-score: 983.6  bits: 188.7 E(32554): 1.8e-48
Smith-Waterman score: 890; 66.5% identity (90.4% similar) in 188 aa overlap (1-188:1-186)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
       ::: :::: :::..::...:.:.:.:...::::::.::::: :..:::...: .::::::
CCDS62 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
       :::::.:.::::: :::::::::::: ::::::::..::::.::: ::::::.: :.. :
CCDS62 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::::..::::::..:  :.: .:  ::..:..:::..:: ..: ...:::: ..::::::
CCDS62 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPS
              130         140       150       160       170        

              190     
pF1KB8 IVLLLQCDMQK    
       :: :::::       
CCDS62 IVRLLQCDPSSAGQF
      180       190   

>>CCDS6932.1 NCS1 gene_id:23413|Hs108|chr9                (190 aa)
 initn: 799 init1: 604 opt: 746  Z-score: 826.9  bits: 159.7 E(32554): 9.7e-40
Smith-Waterman score: 746; 56.8% identity (84.3% similar) in 185 aa overlap (1-185:1-183)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
       :::.:::: :::.:.:...: :.:.:..::::::.:::::: :.   ::..: .:::.::
CCDS69 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
        .:::  .: .::.: :: :.: ::: ::::::::....:: :::..::::.:: ::: :
CCDS69 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::.:..:::.:::... .  ...  ::..:::.::  ::.. : ..::.::.:..:.:::
CCDS69 MLDIVDAIYQMVGNTVELPEEEN--TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS
              130       140         150       160       170        

              190  
pF1KB8 IVLLLQCDMQK 
       ::  :       
CCDS69 IVQALSLYDGLV
      180       190

>>CCDS78448.1 NCS1 gene_id:23413|Hs108|chr9               (172 aa)
 initn: 688 init1: 493 opt: 654  Z-score: 727.3  bits: 141.2 E(32554): 3.4e-34
Smith-Waterman score: 654; 55.8% identity (83.4% similar) in 163 aa overlap (23-185:5-165)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
                             .:.:..::::::.:::::: :.   ::..: .:::.::
CCDS78                   MATITEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD
                                 10        20        30        40  

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
        .:::  .: .::.: :: :.: ::: ::::::::....:: :::..::::.:: ::: :
CCDS78 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE
             50        60        70        80        90       100  

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       ::.:..:::.:::... .  ...  ::..:::.::  ::.. : ..::.::.:..:.:::
CCDS78 MLDIVDAIYQMVGNTVELPEEEN--TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS
            110       120         130       140       150       160

              190  
pF1KB8 IVLLLQCDMQK 
       ::  :       
CCDS78 IVQALSLYDGLV
              170  

>>CCDS11151.1 RCVRN gene_id:5957|Hs108|chr17              (200 aa)
 initn: 600 init1: 600 opt: 609  Z-score: 677.5  bits: 132.2 E(32554): 2e-31
Smith-Waterman score: 609; 45.8% identity (78.1% similar) in 192 aa overlap (1-191:1-192)

                10        20        30        40        50         
pF1KB8 MGKTNS-KLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYG
       ::...:  :. :.::.:  ::.:::.:: .::..::::::.: .. ..::..: ::::  
CCDS11 MGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 DASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRL
       : . .:::.::.::.: :::.::.:.. :: .:. :. .:::.::: .::.::.: :.. 
CCDS11 DPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKN
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 EMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDP
       :.:::. ::.::.    .  . .:  ::..:..::.: . .. ::..: .:: :.. .. 
CCDS11 EVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANK
              130       140       150       160       170       180

     180       190         
pF1KB8 SIVLLLQCDMQK        
        :. :.: . ::        
CCDS11 EILRLIQFEPQKVKEKMKNA
              190       200

>>CCDS64313.1 KCNIP1 gene_id:30820|Hs108|chr5             (188 aa)
 initn: 551 init1: 433 opt: 555  Z-score: 619.1  bits: 121.3 E(32554): 3.7e-28
Smith-Waterman score: 555; 43.5% identity (76.8% similar) in 177 aa overlap (10-186:8-182)

               10        20        30        40        50        60
pF1KB8 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
                :: ::.:  .:.:...::.  :.:: ..::::..: . :.:.: .:::.::
CCDS64   MTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGD
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB8 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
       :: .:.. : .:: .  :.. :..:. :::.  ::. ..:: :.:..::.. :: :.. :
CCDS64 ASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEE
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB8 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
       :..:..::: :.:   .  ...:  ::.:.:: .:.:::..::  .::.:: :. . : .
CCDS64 MMDIVKAIYDMMGKYTYPVLKED--TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDN
      120       130       140         150       160       170      

              190  
pF1KB8 IVLLLQCDMQK 
       :.  ::      
CCDS64 IMRSLQLFQNVM
        180        

>>CCDS4374.1 KCNIP1 gene_id:30820|Hs108|chr5              (216 aa)
 initn: 551 init1: 433 opt: 555  Z-score: 618.3  bits: 121.3 E(32554): 4e-28
Smith-Waterman score: 555; 43.5% identity (76.8% similar) in 177 aa overlap (10-186:36-210)

                                    10        20        30         
pF1KB8                      MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCP
                                     :: ::.:  .:.:...::.  :.:: ..::
CCDS43 GTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECP
          10        20        30        40        50        60     

      40        50        60        70        80        90         
pF1KB8 SGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQ
       ::..: . :.:.: .:::.:::: .:.. : .:: .  :.. :..:. :::.  ::. ..
CCDS43 SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE
          70        80        90       100       110       120     

     100       110       120       130       140       150         
pF1KB8 KLNWAFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMD
       :: :.:..::.. :: :.. ::..:..::: :.:   .  ...:  ::.:.:: .:.:::
CCDS43 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED--TPRQHVDVFFQKMD
         130       140       150       160         170       180   

     160       170       180       190  
pF1KB8 QDKDDQITLEEFKEAAKSDPSIVLLLQCDMQK 
       ..::  .::.:: :. . : .:.  ::      
CCDS43 KNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
           190       200       210      




191 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 02:07:44 2016 done: Sat Nov  5 02:07:45 2016
 Total Scan time:  1.850 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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