GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:30:03

Sequence gi568815592f:125649777_125859799 : 210023 bp : 38.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3352   3369   18  0  0   72   97    39 0.042   2.08
 1.02 Intr +  24636  24699   64  2  1   39  110    79 0.019   2.57
 1.03 Intr +  32495  32704  210  0  0   62  100   113 0.684   7.86
 1.04 Term +  33866  33927   62  0  2   62   54    64 0.534  -2.61
 1.05 PlyA +  34549  34554    6                               1.05

 2.02 PlyA -  36258  36253    6                               1.05
 2.01 Sngl -  39448  39263  186  1  0   77   48   210 0.876  10.73
 2.00 Prom -  44251  44212   40                              -5.25

 3.04 PlyA -  48013  48008    6                               1.05
 3.03 Term -  55556  55386  171  2  0   63   42   154 0.572   5.14
 3.02 Intr -  57591  57390  202  2  1    4  115    69 0.755  -0.43
 3.01 Init -  61360  61146  215  1  2   71   64   203 0.802  14.46
 3.00 Prom -  72221  72182   40                              -3.05

 4.00 Prom +  77431  77470   40                              -4.45
 4.01 Init +  82727  82939  213  1  0   39   47   158 0.915   5.59
 4.02 Intr +  85970  86122  153  1  0   79   57    50 0.393   0.35
 4.03 Term +  87658  87861  204  0  0   -9   39   194 0.608   1.19
 4.04 PlyA +  88056  88061    6                               1.05

 5.00 Prom +  92655  92694   40                              -4.65
 5.01 Init + 100001 100083   83  1  2   87   72   121 0.980  10.89
 5.02 Intr + 102025 102103   79  1  1  106   63    28 0.963   0.73
 5.03 Intr + 102231 102314   84  2  0   76   82   116 0.979   8.90
 5.04 Intr + 104689 104770   82  0  1    7  115    55 0.861  -1.61
 5.05 Term + 109341 110026  686  1  2   57   32   526 0.969  36.70
 5.06 PlyA + 110140 110145    6                               1.05

 6.02 PlyA - 110930 110925    6                               1.05
 6.01 Sngl - 120500 120243  258  2  0   97   36   210 0.672  11.58
 6.00 Prom - 123922 123883   40                              -6.05

 7.00 Prom + 124435 124474   40                              -4.35
 7.01 Init + 126278 126358   81  1  0   46   98    54 0.488   3.22
 7.02 Term + 127512 127607   96  2  0   78   42   114 0.867   2.79
 7.03 PlyA + 129896 129901    6                               1.05

 8.08 PlyA - 130088 130083    6                               1.05
 8.07 Term - 131671 131540  132  1  0   66   53    90 0.574   0.41
 8.06 Intr - 132134 131991  144  2  0   29   64    92 0.334   0.46
 8.05 Intr - 140462 140228  235  1  1  107   50   148 0.630   9.67
 8.04 Intr - 156888 156754  135  2  0   93   64    42 0.011   1.06
 8.03 Intr - 169108 169034   75  0  0  108  108    71 0.329   8.81
 8.02 Intr - 171082 170955  128  1  2   83   38    93 0.301   2.36
 8.01 Init - 183143 183063   81  2  0   80   34    90 0.017   3.82
 8.00 Prom - 190151 190112   40                              -8.05

 9.00 Prom + 193412 193451   40                              -6.25
 9.01 Init + 193478 193581  104  1  2   74  105    97 0.969   9.76
 9.02 Term + 197882 198359  478  2  1    4   42   205 0.195   0.83
 9.03 PlyA + 199020 199025    6                               1.05

10.03 PlyA - 199061 199056    6                               1.05
10.02 Term - 203179 202875  305  2  2   60   43   159 0.012   2.95
10.01 Intr - 209181 209072  110  2  2  101   71   105 0.033   9.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  16873  16798   76  1  1   66   95    86 0.905   8.40
S.002 Sngl - 203252 202875  378  2  0   77   43   196 0.971   9.91
S.003 Term - 209181 209034  148  2  1  101   54   152 0.955   9.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_1|117_aa
MSRRAPSHRGMFAGVRQRMEHMGHADPDRYIAHETIRLAGPNLVYQPNVSQDLLKILPDY
FPRWTSYKLSEELKPDCEYTILFSHLLREPSLIFFLKGSYKWSPEGGQSQVSHSGKN

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_1|354_bp
atgagccgccgtgccccgagccatcgcggaatgttcgctggagtgaggcagcgtatggag
cacatgggacatgcagacccagataggtacatagcccatgaaacaatccggcttgctggc
ccaaatctggtataccagcccaatgtttcccaagatttgctcaagatcttgcctgattac
ttccccagatggacatcttacaaactttcagaggagctgaagccagattgtgagtataca
attctgttcagtcatcttctccgagaaccctctctcatcttttttctcaaaggttcttac
aaatggtcaccagaaggaggacaatcacaagtaagtcactcaggcaaaaactga

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_2|61_aa
MASSAVGPRRNSKTLPKANLAPKKVIVIVWWSAANLIHYSFLNPGKTIISENYAQEVYEM
H

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_2|186_bp
atggccagctcagcagttggaccgagaagaaactccaaaacacttcccaaagccaacctt
gcaccaaaaaaggttatcgtcattgtttggtggtctgctgccaatcttatccactacagc
tttctgaatcccggcaaaaccattatatctgaaaattatgctcaggaagtctatgaaatg
cactga

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_3|195_aa
MVNPKFFASEKITQEHNDKDFFRHTKLKEVTNSRSTLHLTPAHLRVSLKAHTVYYLATTV
DYSGPKDSSVSSHVAHTKPVWWYLHTDAHEIWCRDLDRGTSLGRSIPCPPVLCSVRKIHL
RPQVLRPTSPRNISPILNQELATCARNLATGPRNARSPGFLLSRIPSVWDPTENRTVQLT
WQPLPEPLELWPKAL

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_3|588_bp
atggtcaaccccaaattctttgccagtgaaaagattactcaagaacacaatgataaagac
tttttcagacatacaaagttaaaagaagttactaacagcagatctacactacacttgacg
ccagcacatcttagagtctcactcaaggcccatactgtgtactacctggctaccactgtt
gattattcaggacccaaggactcttcagtcagcagccatgttgctcacacaaagcctgtt
tggtggtatcttcacacggacgcgcatgaaatttggtgccgtgacttggatcgggggacc
tcccttgggagatcaatcccctgtcctcctgttctttgctccgtgagaaagatccaccta
cgacctcaggtcctcagacccaccagcccaaggaacatctcaccaattttaaatcaggag
cttgctacatgtgccagaaatctggccactgggccaaggaatgcccgtagcccgggattc
ctcctaagccgcatcccatctgtgtgggaccccactgaaaatcggacggttcaactcacc
tggcagccacttccagagcccctggaactctggcccaaggctctctga

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_4|189_aa
MTVKAPKGHKGDITSILLVQTLAQSCHAVRRPKLVSSERASGEALKLHNYRVLSCTSPLL
FQLQPLLDYNHMILSNLAPDVRVPLSMQYADLIIKINTFSIQAAHITHKFLFNKERHAFH
TRGQFGQIVSSQYLYEINCTEGMPIFTRRTKVEVNNFEAWGSFRGGEVRGSGTRLGLGQD
KNTQYEKPE

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_4|570_bp
atgactgtcaaggctcctaaaggtcataaaggtgacataacttctatactgttagttcaa
acacttgctcagagctgccatgctgtgaggaggcccaagctagtcagctcagagagagca
tctggagaggctctgaagctacacaactatagagtcctcagctgcacaagccccctgctg
ttccagctccaaccactgctagactacaaccatatgatactgagtaacttagccccagac
gtcagggtgccactgagtatgcagtatgctgacttaatcataaaaattaacacctttagt
attcaagcagctcatatcactcacaaatttctctttaacaaagaaaggcatgcatttcat
acacggggacaattcggtcagattgtttcttcccaatacctctatgagatcaattgcact
gaaggaatgcctatttttactagaagaacgaaggtggaagtcaataattttgaagcatgg
ggtagcttcagaggaggagaggttcggggatcgggtacaagacttggcttgggccaggat
aaaaatactcagtatgaaaaacctgagtag

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_5|337_aa
MKRPCEETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRR
RDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMD
FMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHPL
HPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADSALRM
PSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAA
TAISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_5|1014_bp
atgaagcgcccctgcgaggagacgacctccgagagcgacatggacgagaccatcgacgtg
gggagcgagaacaattactcggggcaaagtactagctctgtgattagattgaattctcca
acaacaacatctcagattatggcaagaaagaaaaggagagggattatagagaaaaggcgt
cgggatcggataaataacagtttatctgagttgagaagacttgtgccaactgcttttgaa
aaacaaggatctgcaaagttagaaaaagctgaaatattgcaaatgacagtggatcatttg
aagatgcttcaggcaacagggggtaaaggctactttgacgcacacgctcttgccatggac
ttcatgagcataggattccgagagtgcctaacagaagttgcgcggtacctgagctccgtg
gaaggcctggactcctcggatccgctgcgggtgcggcttgtgtctcatctcagcacttgc
gccacccagcgggaggcggcggccatgacatcctccatggcccaccaccatcatccgctc
cacccgcatcactgggccgccgccttccaccacctgcccgcagccctgctccagcccaac
ggcctccatgcctcagagtcaaccccttgtcgcctctccacaacttcagaagtgcctcct
gcccacggctctgctctcctcacggccacgtttgcccatgcggattcagccctccgaatg
ccatccacgggcagcgtcgccccctgcgtgccacctctctccacctctctcttgtccctc
tctgccaccgtccacgccgcagccgcagcagccaccgcggctgcacacagcttccctctg
tccttcgcgggggcattccccatgcttcccccaaacgcagcagcagcagtggccgcggcc
acagccatcagcccgcccttgtcagtatcagccacgtccagtcctcagcagaccagcagt
ggaacaaacaataaaccttaccgaccctgggggacagaagttggagctttttaa

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_6|85_aa
MAAVQSSFGSAFEGDRGKRGRGRPWGEGDHGERERERAATCSHKWELNDENTWTHGVEQH
TLAFSEVQKFQVELSEVVLKAGRKW

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_6|258_bp
atggcagcagtacagtccagcttcggctcggcatttgagggagaccgtggaaagagaggg
agagggagaccgtggggagagggagaccatggggagagggagagggagagggctgccaca
tgttctcataagtgggagctgaatgatgagaacacatggacacatggggttgaacaacac
acactcgctttttctgaagtacaaaagttccaggttgaactttctgaagttgttctgaaa
gcaggtcgaaaatggtaa

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_7|58_aa
MWQGHGIIVERRSADKHVNKALCIIDKDPEAQRAGSLNPDNAADIGTVRVNSQSLALE

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_7|177_bp
atgtggcagggtcatgggataatagtggagagaaggtcagcagataaacacgtgaacaaa
gctctctgcatcatagacaaggatccagaggctcagagagctgggtcacttaacccagat
aatgcagctgatattggcacagtcagggttaattcacagtctctggctctggaataa

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_8|309_aa
MPCCDTTVWRCPTDLKSGAAEAAENNKNLTNCAYSKVSLGNDMVPIWIVVKCSFFPDLNN
RSSSWAESGRDLAWTALKYAAPENSALHCQKPAFKAFGTSACPQLNASSALPTTTPTKMP
QERVPQPMRITIKRKIKPHGSGPMATINSSCVPSGVAFNRGAHHLLPPPVPGTPSWMLPN
CSHYSNKNIAVGPSSRLLAETRENLGGGRFASAAGPVPLQLSVALTCFETKKLEENEPDM
CCMCIDYFWEIQKKLVTLVTSGKKKGIKYINDLNSISELLKKKKRDSSTGSPNFVVMDDD
CKSQWRRML

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_8|930_bp
atgccatgctgtgacacaacagtgtggcgatgtcccacagacctgaaatctggagcagcc
gaggctgcagaaaataacaagaacctaactaactgtgcttatagcaaagtatctttggga
aatgatatggttccaatttggattgtcgttaagtgttccttcttccctgatctgaacaac
aggagcagctcatgggctgaaagtgggagagatcttgcttggactgcccttaagtacgct
gctccagagaactctgctctacattgtcagaaaccagctttcaaggcatttggcacctct
gcttgcccccaactaaatgccagtagcgcccttcccacaaccacgccaaccaaaatgccc
caggaaagggtaccacaaccaatgagaatcactattaagaggaaaatcaagccccacggc
tcaggaccgatggccacaataaattcatcctgtgtcccttctggcgttgcgtttaacaga
ggggcccaccatctccttccccctcccgttcccggtacaccatcctggatgctgccaaat
tgcagtcattacagcaataagaacatagcagttgggccctccagccgactcttggcagag
actcgagagaaccttggagggggaaggtttgcatcagctgcggggcctgtgcctttgcaa
ctttctgttgctttgacatgtttcgaaaccaaaaagttggaggaaaatgaaccagatatg
tgttgtatgtgcatagattatttctgggagatacagaagaagctggtaacactggttact
tctgggaagaagaaaggaataaagtatatcaatgatttaaactccatctctgagctgctg
aaaaaaaagaaacgagattcaagcacaggctcacctaattttgtggtaatggatgatgac
tgcaagtcacagtggcggcggatgttgtga

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_9|193_aa
MEEGATSNIALEAGKSKKRTSNGEDGPVDALISAWWIKDLNVRPKTIKTLEENLGNAIQD
RGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETIIRVNRKPTEWEKNFAIYPSDK
GLISRIYKELKQIYKKKTTPSKSGQRNEQTLLKRRHLCSQQTHEKMLIITGHQRNANQNH
NEIPSYASYNGDH

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_9|582_bp
atggaggaaggggctaccagtaatatagctctagaagctggaaaaagcaagaaaagaacc
tctaatggggaggatggccctgtggacgccttgatttcagcctggtggattaaagactta
aatgtcagacctaaaaccataaaaaccctagaagaaaacctaggcaatgccattcaggac
agaggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaa
attgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatc
agagtgaacaggaaacctacagaatgggagaaaaattttgcaatctacccatctgacaaa
gggctaatatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaacccca
tcaaaaagtgggcaaaggaatgaacagacacttctcaaaagaagacatttatgcagccaa
cagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatcaaaatcac
aatgagataccatcttacgccagttataatggcgatcattaa

>gi568815592f:125649777_125859799|GENSCAN_predicted_peptide_10|138_aa
XLEPPKAAVNWDALDLRSDAPSSGREHRLGMGLRNTPELEKTILKLIWNQKRAQIAKEIL
SKKNKSEGITLPDITLPNFKLYYKAIVTKTAWYLYKCKCIDIAMEQNKEPRNKAKYSQPT
DLRQSIQKHKLGKGNSIQ

>gi568815592f:125649777_125859799|GENSCAN_predicted_CDS_10|417_bp
nnactagagccaccaaaagcagcagtgaactgggatgctcttgacttgaggtctgatgct
ccatctagcggtagagaacatcgccttgggatgggactgagaaacacgccagaattagaa
aaaacaatcttaaaactcatatggaaccaaaaaagagcccaaatagccaaagaaatccta
agcaaaaagaataaatctgaaggcatcacattacccgacatcacattacccaacttcaaa
ttatactacaaagctatagttaccaaaacagcatggtacctgtataaatgtaaatgtata
gacattgcaatggaacagaataaagaacccagaaataaagccaaatactcacaaccaact
gatcttcgacagagcatacaaaaacataaactggggaaaggaaactctattcaataa